RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 MIB2Q96AX9 1013 aa17.7■□□□□ 0.42
NUP50-207ENST00000424634 FBXO6Q9NRD1 293 aaPredicted RBP17.7■□□□□ 0.42
NUP50-207ENST00000424634 TRMT1Q9NXH9 659 aaKnown RBP17.7■□□□□ 0.42
NUP50-207ENST00000424634 MRFAP1Q9Y605 127 aa17.7■□□□□ 0.42
NUP50-207ENST00000424634 RP1L1Q8IWN7 2480 aaPredicted RBP17.69■□□□□ 0.42
NUP50-207ENST00000424634 CTAGE9A4FU28 777 aa17.69■□□□□ 0.42
NUP50-207ENST00000424634 MASP2O00187 686 aa17.69■□□□□ 0.42
NUP50-207ENST00000424634 KIF5CO60282 957 aa17.69■□□□□ 0.42
NUP50-207ENST00000424634 PSIP1O75475 530 aaKnown RBP17.69■□□□□ 0.42
NUP50-207ENST00000424634 USP1O94782 785 aa17.69■□□□□ 0.42
NUP50-207ENST00000424634 FKBP9O95302 570 aa17.69■□□□□ 0.42
NUP50-207ENST00000424634 MED26O95402 600 aa17.69■□□□□ 0.42
NUP50-207ENST00000424634 ONECUT2O95948 504 aa17.69■□□□□ 0.42
NUP50-207ENST00000424634 ERGP11308 486 aa17.69■□□□□ 0.42
NUP50-207ENST00000424634 FOLR3P41439 243 aa17.69■□□□□ 0.42
NUP50-207ENST00000424634 THOC5Q13769 683 aaKnown RBP17.69■□□□□ 0.42
NUP50-207ENST00000424634 ZC3H12BQ5HYM0 836 aaKnown RBP17.69■□□□□ 0.42
NUP50-207ENST00000424634 FRMPD2BQ6IN97 320 aa17.69■□□□□ 0.42
NUP50-207ENST00000424634 RAB43Q86YS6 212 aa17.69■□□□□ 0.42
NUP50-207ENST00000424634 DTWD1Q8N5C7 304 aa17.69■□□□□ 0.42
NUP50-207ENST00000424634 OR9A1PQ8NGU1 263 aa17.69■□□□□ 0.42
NUP50-207ENST00000424634 MAGEC3Q8TD91 643 aa17.69■□□□□ 0.42
NUP50-207ENST00000424634 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.69■□□□□ 0.42
NUP50-207ENST00000424634 PTERQ96BW5 349 aa17.69■□□□□ 0.42
NUP50-207ENST00000424634 SPATA7Q9P0W8 599 aa17.69■□□□□ 0.42
NUP50-207ENST00000424634 NDOR1Q9UHB4 597 aa17.69■□□□□ 0.42
NUP50-207ENST00000424634 SNX12Q9UMY4 172 aa17.69■□□□□ 0.42
NUP50-207ENST00000424634 DOPEY2Q9Y3R5 2298 aa17.69■□□□□ 0.42
NUP50-207ENST00000424634 LRRK2Q5S007 2527 aa17.68■□□□□ 0.42
NUP50-207ENST00000424634 LOC105369274A0A096LPK9 316 aa17.68■□□□□ 0.42
NUP50-207ENST00000424634 LOC102723532A0A0G2JNH3 316 aa17.68■□□□□ 0.42
NUP50-207ENST00000424634 FITM1A5D6W6 292 aa17.68■□□□□ 0.42
NUP50-207ENST00000424634 E5RI56 91 aa17.68■□□□□ 0.42
NUP50-207ENST00000424634 MYO1CO00159 1063 aa17.68■□□□□ 0.42
NUP50-207ENST00000424634 SLC1A2P43004 574 aa17.68■□□□□ 0.42
NUP50-207ENST00000424634 FNTAP49354 379 aa17.68■□□□□ 0.42
NUP50-207ENST00000424634 ARSFP54793 590 aa17.68■□□□□ 0.42
NUP50-207ENST00000424634 VSX2P58304 361 aaPredicted RBP17.68■□□□□ 0.42
NUP50-207ENST00000424634 TCTE1Q5JU00 501 aa17.68■□□□□ 0.42
NUP50-207ENST00000424634 WASHC2DQ5SRD0 308 aa17.68■□□□□ 0.42
NUP50-207ENST00000424634 RNASEH2BQ5TBB1 312 aaKnown RBP17.68■□□□□ 0.42
NUP50-207ENST00000424634 FBXO42Q6P3S6 717 aa17.68■□□□□ 0.42
NUP50-207ENST00000424634 SUSD1Q6UWL2 747 aa17.68■□□□□ 0.42
NUP50-207ENST00000424634 CYHR1Q6ZMK1 362 aa17.68■□□□□ 0.42
NUP50-207ENST00000424634 COX15Q7KZN9 410 aa17.68■□□□□ 0.42
NUP50-207ENST00000424634 OVCH1Q7RTY7 1134 aa17.68■□□□□ 0.42
NUP50-207ENST00000424634 PPP1R32Q7Z5V6 425 aa17.68■□□□□ 0.42
NUP50-207ENST00000424634 OR4N4Q8N0Y3 316 aa17.68■□□□□ 0.42
NUP50-207ENST00000424634 RAB42Q8N4Z0 105 aa17.68■□□□□ 0.42
NUP50-207ENST00000424634 DLG3Q92796 817 aa17.68■□□□□ 0.42
NUP50-207ENST00000424634 PKP4Q99569 1192 aa17.68■□□□□ 0.42
NUP50-207ENST00000424634 SELENOSQ9BQE4 189 aa17.68■□□□□ 0.42
NUP50-207ENST00000424634 ACAT2Q9BWD1 397 aa17.68■□□□□ 0.42
NUP50-207ENST00000424634 CUTCQ9NTM9 273 aa17.68■□□□□ 0.42
NUP50-207ENST00000424634 C20orf96Q9NUD7 363 aaPredicted RBP17.68■□□□□ 0.42
NUP50-207ENST00000424634 VPS9D1Q9Y2B5 631 aa17.68■□□□□ 0.42
NUP50-207ENST00000424634 MAD1L1Q9Y6D9 718 aa17.68■□□□□ 0.42
NUP50-207ENST00000424634 MDC1Q14676 2089 aaKnown RBP17.68■□□□□ 0.42
NUP50-207ENST00000424634 A0A0J9YVX5 310 aa17.67■□□□□ 0.42
NUP50-207ENST00000424634 A0A1B0GX78 115 aa17.67■□□□□ 0.42
NUP50-207ENST00000424634 CES2O00748 559 aa17.67■□□□□ 0.42
NUP50-207ENST00000424634 DSCR3O14972 297 aa17.67■□□□□ 0.42
NUP50-207ENST00000424634 ZSCAN12O43309 604 aa17.67■□□□□ 0.42
NUP50-207ENST00000424634 SRPX2O60687 465 aaPredicted RBP17.67■□□□□ 0.42
NUP50-207ENST00000424634 HAUS5O94927 633 aa17.67■□□□□ 0.42
NUP50-207ENST00000424634 CD63P08962 238 aa17.67■□□□□ 0.42
NUP50-207ENST00000424634 CD97P48960 835 aa17.67■□□□□ 0.42
NUP50-207ENST00000424634 RRADP55042 308 aa17.67■□□□□ 0.42
NUP50-207ENST00000424634 MPP1Q00013 466 aa17.67■□□□□ 0.42
NUP50-207ENST00000424634 CUL1Q13616 776 aa17.67■□□□□ 0.42
NUP50-207ENST00000424634 RAPSNQ13702 412 aa17.67■□□□□ 0.42
NUP50-207ENST00000424634 GRM7Q14831 915 aa17.67■□□□□ 0.42
NUP50-207ENST00000424634 LONRF1Q17RB8 773 aa17.67■□□□□ 0.42
NUP50-207ENST00000424634 PPIL6Q8IXY8 311 aa17.67■□□□□ 0.42
NUP50-207ENST00000424634 GRK7Q8WTQ7 553 aa17.67■□□□□ 0.42
NUP50-207ENST00000424634 IP6K3Q96PC2 410 aa17.67■□□□□ 0.42
NUP50-207ENST00000424634 SYNPO2LQ9H987 977 aa17.67■□□□□ 0.42
NUP50-207ENST00000424634 SLC6A20Q9NP91 592 aa17.67■□□□□ 0.42
NUP50-207ENST00000424634 P4HTMQ9NXG6 502 aa17.67■□□□□ 0.42
NUP50-207ENST00000424634 STOX2Q9P2F5 926 aaPredicted RBP17.67■□□□□ 0.42
NUP50-207ENST00000424634 KLHL42Q9P2K6 505 aa17.67■□□□□ 0.42
NUP50-207ENST00000424634 FBXO5Q9UKT4 447 aa17.67■□□□□ 0.42
NUP50-207ENST00000424634 DHRS7Q9Y394 339 aa17.67■□□□□ 0.42
NUP50-207ENST00000424634 ZNF451Q9Y4E5 1061 aa17.67■□□□□ 0.42
NUP50-207ENST00000424634 PCDHGB7Q9Y5F8 929 aa17.67■□□□□ 0.42
NUP50-207ENST00000424634 FAM169AQ9Y6X4 670 aa17.67■□□□□ 0.42
NUP50-207ENST00000424634 DOCK10Q96BY6 2186 aa17.67■□□□□ 0.42
NUP50-207ENST00000424634 SHANK1Q9Y566 2161 aa17.66■□□□□ 0.42
NUP50-207ENST00000424634 IGKV1-8A0A0C4DH67 115 aa17.66■□□□□ 0.42
NUP50-207ENST00000424634 OR2A25A4D2G3 310 aa17.66■□□□□ 0.42
NUP50-207ENST00000424634 OR1D4P47884 311 aa17.66■□□□□ 0.42
NUP50-207ENST00000424634 SRSF1Q07955 248 aaKnown RBP eCLIP17.66■□□□□ 0.42
NUP50-207ENST00000424634 HSP90AA5PQ58FG0 334 aa17.66■□□□□ 0.42
NUP50-207ENST00000424634 DCAF10Q5QP82 559 aa17.66■□□□□ 0.42
NUP50-207ENST00000424634 YOD1Q5VVQ6 348 aaPredicted RBP17.66■□□□□ 0.42
NUP50-207ENST00000424634 NEK10Q6ZWH5 1172 aa17.66■□□□□ 0.42
NUP50-207ENST00000424634 RNF44Q7L0R7 432 aa17.66■□□□□ 0.42
NUP50-207ENST00000424634 METTL27Q8N6F8 245 aaPredicted RBP17.66■□□□□ 0.42
NUP50-207ENST00000424634 RBMXL3Q8N7X1 1067 aaKnown RBP17.66■□□□□ 0.42
NUP50-207ENST00000424634 ASB11Q8WXH4 323 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms