RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 SH2B3Q9UQQ2 575 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 SLC22A14Q9Y267 594 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 MDC1Q14676 2089 aaKnown RBP15.17■□□□□ 0.02
DDX55-203ENST00000421670 SPAARA0A1B0GVQ0 90 aa15.17■□□□□ 0.02
DDX55-203ENST00000421670 C2orf74A8MZ97 194 aa15.17■□□□□ 0.02
DDX55-203ENST00000421670 SLC30A4O14863 429 aa15.17■□□□□ 0.02
DDX55-203ENST00000421670 CCNT2O60583 730 aaKnown RBP15.17■□□□□ 0.02
DDX55-203ENST00000421670 UGT2B7P16662 529 aa15.17■□□□□ 0.02
DDX55-203ENST00000421670 GGT5P36269 586 aa15.17■□□□□ 0.02
DDX55-203ENST00000421670 PPP2R2AP63151 447 aa15.17■□□□□ 0.02
DDX55-203ENST00000421670 PRAMEF13Q5VWM6 474 aa15.17■□□□□ 0.02
DDX55-203ENST00000421670 CAPN13Q6MZZ7 669 aaPredicted RBP15.17■□□□□ 0.02
DDX55-203ENST00000421670 ARMC6Q6NXE6 501 aa15.17■□□□□ 0.02
DDX55-203ENST00000421670 TMPRSS9Q7Z410 1059 aa15.17■□□□□ 0.02
DDX55-203ENST00000421670 TRIM73Q86UV7 250 aa15.17■□□□□ 0.02
DDX55-203ENST00000421670 FLVCR1-AS1Q8TAF5 88 aa15.17■□□□□ 0.02
DDX55-203ENST00000421670 MDM1Q8TC05 714 aa15.17■□□□□ 0.02
DDX55-203ENST00000421670 PPM1MQ96MI6 270 aa15.17■□□□□ 0.02
DDX55-203ENST00000421670 TGM7Q96PF1 710 aa15.17■□□□□ 0.02
DDX55-203ENST00000421670 OR4K3Q96R72 315 aa15.17■□□□□ 0.02
DDX55-203ENST00000421670 PAIP2Q9BPZ3 127 aaKnown RBP15.17■□□□□ 0.02
DDX55-203ENST00000421670 SGPP1Q9BX95 441 aa15.17■□□□□ 0.02
DDX55-203ENST00000421670 CD244Q9BZW8 370 aa15.17■□□□□ 0.02
DDX55-203ENST00000421670 TWSG1Q9GZX9 223 aa15.17■□□□□ 0.02
DDX55-203ENST00000421670 LRRN3Q9H3W5 708 aa15.17■□□□□ 0.02
DDX55-203ENST00000421670 EPB41L1Q9H4G0 881 aa15.17■□□□□ 0.02
DDX55-203ENST00000421670 KLHL3Q9UH77 587 aa15.17■□□□□ 0.02
DDX55-203ENST00000421670 TMCO1Q9UM00 188 aa15.17■□□□□ 0.02
DDX55-203ENST00000421670 WDR91A4D1P6 747 aa15.16■□□□□ 0.02
DDX55-203ENST00000421670 STX16-NPEPL1H3BU86 382 aa15.16■□□□□ 0.02
DDX55-203ENST00000421670 STX16O14662 325 aa15.16■□□□□ 0.02
DDX55-203ENST00000421670 GIPC1O14908 333 aa15.16■□□□□ 0.02
DDX55-203ENST00000421670 CAPN5O15484 640 aaPredicted RBP15.16■□□□□ 0.02
DDX55-203ENST00000421670 ZW10O43264 779 aa15.16■□□□□ 0.02
DDX55-203ENST00000421670 PRICKLE3O43900 615 aaPredicted RBP15.16■□□□□ 0.02
DDX55-203ENST00000421670 RFPL3O75679 317 aa15.16■□□□□ 0.02
DDX55-203ENST00000421670 STK16O75716 305 aa15.16■□□□□ 0.02
DDX55-203ENST00000421670 NR1D1P20393 614 aa15.16■□□□□ 0.02
DDX55-203ENST00000421670 CSRP1P21291 193 aaKnown RBP15.16■□□□□ 0.02
DDX55-203ENST00000421670 MPSTP25325 297 aa15.16■□□□□ 0.02
DDX55-203ENST00000421670 ALDH3A1P30838 453 aa15.16■□□□□ 0.02
DDX55-203ENST00000421670 SERPINB4P48594 390 aa15.16■□□□□ 0.02
DDX55-203ENST00000421670 WDR4P57081 412 aaKnown RBP15.16■□□□□ 0.02
DDX55-203ENST00000421670 KIR2DS3Q14952 304 aa15.16■□□□□ 0.02
DDX55-203ENST00000421670 FAM92BQ6ZTR7 304 aa15.16■□□□□ 0.02
DDX55-203ENST00000421670 GLRX5Q86SX6 157 aa15.16■□□□□ 0.02
DDX55-203ENST00000421670 ALYREFQ86V81 257 aaKnown RBP15.16■□□□□ 0.02
DDX55-203ENST00000421670 THOC6Q86W42 341 aaKnown RBP15.16■□□□□ 0.02
DDX55-203ENST00000421670 SLC22A9Q8IVM8 553 aa15.16■□□□□ 0.02
DDX55-203ENST00000421670 OR2A1Q8NGT9 310 aa15.16■□□□□ 0.02
DDX55-203ENST00000421670 FAM122AQ96E09 287 aa15.16■□□□□ 0.02
DDX55-203ENST00000421670 OR2A14Q96R47 310 aa15.16■□□□□ 0.02
DDX55-203ENST00000421670 GFM1Q96RP9 751 aaKnown RBP15.16■□□□□ 0.02
DDX55-203ENST00000421670 MIPEPQ99797 713 aa15.16■□□□□ 0.02
DDX55-203ENST00000421670 PITPNM3Q9BZ71 974 aa15.16■□□□□ 0.02
DDX55-203ENST00000421670 ABCG4Q9H172 646 aa15.16■□□□□ 0.02
DDX55-203ENST00000421670 OXSMQ9NWU1 459 aa15.16■□□□□ 0.02
DDX55-203ENST00000421670 NKIRAS1Q9NYS0 192 aa15.16■□□□□ 0.02
DDX55-203ENST00000421670 OPTCQ9UBM4 332 aa15.16■□□□□ 0.02
DDX55-203ENST00000421670 POMT2Q9UKY4 750 aa15.16■□□□□ 0.02
DDX55-203ENST00000421670 E2F3O00716 465 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 KIF1CO43896 1103 aaKnown RBP15.15■□□□□ 0.02
DDX55-203ENST00000421670 CPNE6O95741 557 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 BPGMP07738 259 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 DHRS4L1P0CG22 281 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 HOXB3P14651 431 aaPredicted RBP15.15■□□□□ 0.02
DDX55-203ENST00000421670 CCND1P24385 295 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 OAS2P29728 719 aaKnown RBP15.15■□□□□ 0.02
DDX55-203ENST00000421670 PRDX3P30048 256 aaKnown RBP15.15■□□□□ 0.02
DDX55-203ENST00000421670 SLC18A1P54219 525 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 PRKAA2P54646 552 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 HERVK_113P63132 956 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 SF1Q15637 639 aaKnown RBP15.15■□□□□ 0.02
DDX55-203ENST00000421670 RSPO4Q2I0M5 234 aaPredicted RBP15.15■□□□□ 0.02
DDX55-203ENST00000421670 ZNF678Q5SXM1 525 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 HHATQ5VTY9 493 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 LIPMQ5VYY2 423 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 SPESP1Q6UW49 350 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 LRRC70Q7Z2Q7 622 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 RAB44Q7Z6P3 723 aaPredicted RBP15.15■□□□□ 0.02
DDX55-203ENST00000421670 KLHDC8AQ8IYD2 350 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 NSUN5Q96P11 429 aaKnown RBP15.15■□□□□ 0.02
DDX55-203ENST00000421670 ERVK-6Q9BXR3 956 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 PCTPQ9UKL6 214 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 PCDHB11Q9Y5F2 797 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 ENTPD2Q9Y5L3 495 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 MN1Q10571 1320 aaPredicted RBP15.15■□□□□ 0.02
DDX55-203ENST00000421670 KIF26BQ2KJY2 2108 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 D6RAR5 112 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 K7EPI3 171 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 MATN2O00339 956 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 NTN3O00634 580 aaPredicted RBP15.15■□□□□ 0.02
DDX55-203ENST00000421670 RPS17P08708 135 aaKnown RBP15.15■□□□□ 0.02
DDX55-203ENST00000421670 NPPBP16860 134 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 PLA2G5P39877 138 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 LSSP48449 732 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 NOVA1P51513 510 aaKnown RBP15.15■□□□□ 0.02
DDX55-203ENST00000421670 CLDN6P56747 220 aa15.15■□□□□ 0.02
DDX55-203ENST00000421670 SIM1P81133 766 aaPredicted RBP15.15■□□□□ 0.02
DDX55-203ENST00000421670 SPIDRQ14159 915 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms