RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 MMP11P24347 488 aa13.54□□□□□ -0.24
LINC01006-202ENST00000418309 PSMB5P28074 263 aa13.54□□□□□ -0.24
LINC01006-202ENST00000418309 CCNFP41002 786 aa13.54□□□□□ -0.24
LINC01006-202ENST00000418309 OR1D4P47884 311 aa13.54□□□□□ -0.24
LINC01006-202ENST00000418309 AIMP2Q13155 320 aaKnown RBP13.54□□□□□ -0.24
LINC01006-202ENST00000418309 TRIP13Q15645 432 aaPredicted RBP13.54□□□□□ -0.24
LINC01006-202ENST00000418309 KCTD19Q17RG1 926 aaPredicted RBP13.54□□□□□ -0.24
LINC01006-202ENST00000418309 CCSMST1Q4G0I0 132 aa13.54□□□□□ -0.24
LINC01006-202ENST00000418309 C4orf17Q53FE4 359 aa13.54□□□□□ -0.24
LINC01006-202ENST00000418309 WASHC2DQ5SRD0 308 aa13.54□□□□□ -0.24
LINC01006-202ENST00000418309 LRRC8BQ6P9F7 803 aa13.54□□□□□ -0.24
LINC01006-202ENST00000418309 SHISA6Q6ZSJ9 500 aa13.54□□□□□ -0.24
LINC01006-202ENST00000418309 SSC4DQ8WTU2 575 aa13.54□□□□□ -0.24
LINC01006-202ENST00000418309 FKBP10Q96AY3 582 aa13.54□□□□□ -0.24
LINC01006-202ENST00000418309 SNRNP40Q96DI7 357 aaKnown RBP13.54□□□□□ -0.24
LINC01006-202ENST00000418309 KIFC1Q9BW19 673 aa13.54□□□□□ -0.24
LINC01006-202ENST00000418309 SOX17Q9H6I2 414 aaPredicted RBP13.54□□□□□ -0.24
LINC01006-202ENST00000418309 ZC3H7BQ9UGR2 993 aaKnown RBP13.54□□□□□ -0.24
LINC01006-202ENST00000418309 FBXL4Q9UKA2 621 aa13.54□□□□□ -0.24
LINC01006-202ENST00000418309 CRYL1Q9Y2S2 319 aa13.54□□□□□ -0.24
LINC01006-202ENST00000418309 MAU2Q9Y6X3 613 aa13.54□□□□□ -0.24
LINC01006-202ENST00000418309 FAM169AQ9Y6X4 670 aa13.54□□□□□ -0.24
LINC01006-202ENST00000418309 PCM1Q15154 2024 aa13.54□□□□□ -0.24
LINC01006-202ENST00000418309 A0A0J9YVX5 310 aa13.53□□□□□ -0.24
LINC01006-202ENST00000418309 H3BMM5 538 aa13.53□□□□□ -0.24
LINC01006-202ENST00000418309 PRICKLE3O43900 615 aaPredicted RBP13.53□□□□□ -0.24
LINC01006-202ENST00000418309 SRPX2O60687 465 aaPredicted RBP13.53□□□□□ -0.24
LINC01006-202ENST00000418309 CTSVO60911 334 aa13.53□□□□□ -0.24
LINC01006-202ENST00000418309 NIPSNAP2O75323 286 aa13.53□□□□□ -0.24
LINC01006-202ENST00000418309 ALOX12BO75342 701 aa13.53□□□□□ -0.24
LINC01006-202ENST00000418309 CCDC175P0C221 793 aa13.53□□□□□ -0.24
LINC01006-202ENST00000418309 CXCR5P32302 372 aa13.53□□□□□ -0.24
LINC01006-202ENST00000418309 GCGRP47871 477 aa13.53□□□□□ -0.24
LINC01006-202ENST00000418309 GLRBP48167 497 aa13.53□□□□□ -0.24
LINC01006-202ENST00000418309 VPS41P49754 854 aa13.53□□□□□ -0.24
LINC01006-202ENST00000418309 SARNPP82979 210 aaKnown RBP13.53□□□□□ -0.24
LINC01006-202ENST00000418309 CDK16Q00536 496 aa13.53□□□□□ -0.24
LINC01006-202ENST00000418309 TSTA3Q13630 321 aaPredicted RBP13.53□□□□□ -0.24
LINC01006-202ENST00000418309 NKG7Q16617 165 aa13.53□□□□□ -0.24
LINC01006-202ENST00000418309 CTSL3PQ5NE16 218 aa13.53□□□□□ -0.24
LINC01006-202ENST00000418309 RNF187Q5TA31 235 aaPredicted RBP13.53□□□□□ -0.24
LINC01006-202ENST00000418309 IRAK1BP1Q5VVH5 260 aa13.53□□□□□ -0.24
LINC01006-202ENST00000418309 CASC4Q6P4E1 433 aa13.53□□□□□ -0.24
LINC01006-202ENST00000418309 IGFL3Q6UXB1 125 aa13.53□□□□□ -0.24
LINC01006-202ENST00000418309 OR2L3Q8NG85 312 aa13.53□□□□□ -0.24
LINC01006-202ENST00000418309 NACC2Q96BF6 587 aa13.53□□□□□ -0.24
LINC01006-202ENST00000418309 BIRC8Q96P09 236 aa13.53□□□□□ -0.24
LINC01006-202ENST00000418309 ACAT2Q9BWD1 397 aa13.53□□□□□ -0.24
LINC01006-202ENST00000418309 WDR54Q9H977 334 aa13.53□□□□□ -0.24
LINC01006-202ENST00000418309 MRM3Q9HC36 420 aaKnown RBP13.53□□□□□ -0.24
LINC01006-202ENST00000418309 SLC6A20Q9NP91 592 aa13.53□□□□□ -0.24
LINC01006-202ENST00000418309 HOMER3Q9NSC5 361 aa13.53□□□□□ -0.24
LINC01006-202ENST00000418309 ASF1BQ9NVP2 202 aa13.53□□□□□ -0.24
LINC01006-202ENST00000418309 IL1RAPL1Q9NZN1 696 aa13.53□□□□□ -0.24
LINC01006-202ENST00000418309 SOX13Q9UN79 622 aa13.53□□□□□ -0.24
LINC01006-202ENST00000418309 TCRBV7S3A2A0A539 114 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 HYKKA2RU49 373 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 E5RI56 91 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 AVILO75366 819 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 ERVK-10P10266 1014 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 PAMP19021 973 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 TPSB2P20231 275 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 ARNTP27540 789 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 CMPK1P30085 196 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 SOX8P57073 446 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 FASTKQ14296 549 aaKnown RBP13.52□□□□□ -0.25
LINC01006-202ENST00000418309 NR6A1Q15406 480 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 TPSAB1Q15661 275 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 RBBP7Q16576 425 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 PRAMEF13Q5VWM6 474 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 FRMPD2BQ6IN97 320 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 COX15Q7KZN9 410 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 PARP9Q8IXQ6 854 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 TRIM58Q8NG06 486 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 OR2A1Q8NGT9 310 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 HMGCLL1Q8TB92 370 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 LPGAT1Q92604 370 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 VPS50Q96JG6 964 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 TCF12Q99081 682 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 ZBTB20Q9HC78 741 aaPredicted RBP13.52□□□□□ -0.25
LINC01006-202ENST00000418309 ZNF304Q9HCX3 659 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 SPATA7Q9P0W8 599 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 SAMD15Q9P1V8 674 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 STOX2Q9P2F5 926 aaPredicted RBP13.52□□□□□ -0.25
LINC01006-202ENST00000418309 CTSFQ9UBX1 484 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 PLEKHB1Q9UF11 243 aaPredicted RBP13.52□□□□□ -0.25
LINC01006-202ENST00000418309 NXT1Q9UKK6 140 aaKnown RBP13.52□□□□□ -0.25
LINC01006-202ENST00000418309 COPG1Q9Y678 874 aaKnown RBP13.52□□□□□ -0.25
LINC01006-202ENST00000418309 MDC1Q14676 2089 aaKnown RBP13.52□□□□□ -0.25
LINC01006-202ENST00000418309 ICE1Q9Y2F5 2266 aa13.52□□□□□ -0.25
LINC01006-202ENST00000418309 SPENQ96T58 3664 aaKnown RBP13.51□□□□□ -0.25
LINC01006-202ENST00000418309 LOC105369274A0A096LPK9 316 aa13.51□□□□□ -0.25
LINC01006-202ENST00000418309 LOC102723532A0A0G2JNH3 316 aa13.51□□□□□ -0.25
LINC01006-202ENST00000418309 FITM1A5D6W6 292 aa13.51□□□□□ -0.25
LINC01006-202ENST00000418309 SOCS6O14544 535 aa13.51□□□□□ -0.25
LINC01006-202ENST00000418309 ONECUT2O95948 504 aa13.51□□□□□ -0.25
LINC01006-202ENST00000418309 ESR1P03372 595 aa13.51□□□□□ -0.25
LINC01006-202ENST00000418309 OCA2Q04671 838 aa13.51□□□□□ -0.25
LINC01006-202ENST00000418309 GPS1Q13098 491 aa13.51□□□□□ -0.25
LINC01006-202ENST00000418309 ELOAQ14241 798 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms