RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 PPP1R14CQ8TAE6 165 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 HMGCLL1Q8TB92 370 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 MCOLN3Q8TDD5 553 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 JPH3Q8WXH2 748 aaPredicted RBP6.62□□□□□ -1.35
CPS1-202ENST00000417946 PYCR2Q96C36 320 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 C12orf66Q96MD2 445 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 CAMK1GQ96NX5 476 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 EGFL8Q99944 293 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 ELAC2Q9BQ52 826 aaKnown RBP6.62□□□□□ -1.35
CPS1-202ENST00000417946 EBF4Q9BQW3 602 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 LRFN3Q9BTN0 628 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 TRMOQ9BU70 441 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 KRTAP4-6Q9BYQ5 205 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 KCNH6Q9H252 994 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 SPNS1Q9H2V7 528 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 XKR8Q9H6D3 395 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 NOL11Q9H8H0 719 aaKnown RBP6.62□□□□□ -1.35
CPS1-202ENST00000417946 SYNPO2LQ9H987 977 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 CAPN10Q9HC96 672 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 PRM3Q9NNZ6 103 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 NPHS2Q9NP85 383 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 TIMMDC1Q9NPL8 285 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 FSCN3Q9NQT6 498 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 IMP3Q9NV31 184 aaKnown RBP6.62□□□□□ -1.35
CPS1-202ENST00000417946 INTS7Q9NVH2 962 aaKnown RBP6.62□□□□□ -1.35
CPS1-202ENST00000417946 DNAJC28Q9NX36 388 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 WWOXQ9NZC7 414 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 SPATA7Q9P0W8 599 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 KLHL14Q9P2G3 628 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 APOBEC3BQ9UH17 382 aaKnown RBP6.62□□□□□ -1.35
CPS1-202ENST00000417946 ASF1AQ9Y294 204 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.62□□□□□ -1.35
CPS1-202ENST00000417946 SNX11Q9Y5W9 270 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 PTGDR2Q9Y5Y4 395 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 USH1CQ9Y6N9 552 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 MUC6Q6W4X9 2439 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 RP1P56715 2156 aa6.62□□□□□ -1.35
CPS1-202ENST00000417946 MDC1Q14676 2089 aaKnown RBP6.62□□□□□ -1.35
CPS1-202ENST00000417946 COL27A1Q8IZC6 1860 aaPredicted RBP6.62□□□□□ -1.35
CPS1-202ENST00000417946 ADAMTS20P59510 1910 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 PATE3B3GLJ2 98 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 E7EQ34 232 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 BTN3A3O00478 584 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 SDHDO14521 159 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 RRP9O43818 475 aaKnown RBP6.61□□□□□ -1.35
CPS1-202ENST00000417946 NRP2O60462 931 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 CCNT2O60583 730 aaKnown RBP6.61□□□□□ -1.35
CPS1-202ENST00000417946 OR4F21O95013 312 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 ESRRBO95718 433 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 S100BP04271 92 aaPredicted RBP6.61□□□□□ -1.35
CPS1-202ENST00000417946 FGF4P08620 206 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 FBXO45P0C2W1 286 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 NPPBP16860 134 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 PSMB5P28074 263 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 RXRGP48443 463 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 HNMTP50135 292 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 RPL14P50914 215 aaKnown RBP6.61□□□□□ -1.35
CPS1-202ENST00000417946 PNLIPRP1P54315 467 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 INHBCP55103 352 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 BTKQ06187 659 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 ASPHQ12797 758 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 ILF3Q12906 894 aaKnown RBP eCLIP6.61□□□□□ -1.35
CPS1-202ENST00000417946 NAE1Q13564 534 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 SLC9B1Q4ZJI4 515 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 PRRT3Q5FWE3 981 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 XKR7Q5GH72 579 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 SH2D4BQ5SQS7 431 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.61□□□□□ -1.35
CPS1-202ENST00000417946 CLEC6AQ6EIG7 209 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 TTC23LQ6PF05 361 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 EPGNQ6UW88 154 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 SLCO4C1Q6ZQN7 724 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 GPRIN3Q6ZVF9 776 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 RAB44Q7Z6P3 723 aaPredicted RBP6.61□□□□□ -1.35
CPS1-202ENST00000417946 THOC6Q86W42 341 aaKnown RBP6.61□□□□□ -1.35
CPS1-202ENST00000417946 WDR75Q8IWA0 830 aaKnown RBP6.61□□□□□ -1.35
CPS1-202ENST00000417946 TBC1D21Q8IYX1 336 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 SLC25A45Q8N413 288 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 L3MBTL4Q8NA19 623 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 OR4F6Q8NGB9 312 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 OR52E1Q8NGJ3 308 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 PIWIL2Q8TC59 973 aaKnown RBP6.61□□□□□ -1.35
CPS1-202ENST00000417946 AGR3Q8TD06 166 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 BCAS4Q8TDM0 211 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 SLC37A2Q8TED4 501 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 STON2Q8WXE9 905 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 RAD51AP1Q96B01 352 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 SKA1Q96BD8 255 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 GRAMD1AQ96CP6 724 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 WDR34Q96EX3 536 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 SEC16BQ96JE7 1060 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 MAELQ96JY0 434 aaKnown RBP6.61□□□□□ -1.35
CPS1-202ENST00000417946 C3orf30Q96M34 536 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 FOPNLQ96NB1 174 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 NTMT1Q9BV86 223 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 TMEM120AQ9BXJ8 343 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 GSDMCQ9BYG8 508 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 TRIT1Q9H3H1 467 aaKnown RBP6.61□□□□□ -1.35
CPS1-202ENST00000417946 SLC32A1Q9H598 525 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 ZNF385DQ9H6B1 395 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms