RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 KIRREL2Q6UWL6 708 aa13.82□□□□□ -0.2
PAF1-202ENST00000416728 LRRC6Q86X45 466 aa13.82□□□□□ -0.2
PAF1-202ENST00000416728 METTL27Q8N6F8 245 aaPredicted RBP13.82□□□□□ -0.2
PAF1-202ENST00000416728 OTUD6BQ8N6M0 293 aa13.82□□□□□ -0.2
PAF1-202ENST00000416728 PPP4R1Q8TF05 950 aa13.82□□□□□ -0.2
PAF1-202ENST00000416728 FOPNLQ96NB1 174 aa13.82□□□□□ -0.2
PAF1-202ENST00000416728 AGAP4Q96P64 663 aa13.82□□□□□ -0.2
PAF1-202ENST00000416728 BARD1Q99728 777 aaKnown RBP13.82□□□□□ -0.2
PAF1-202ENST00000416728 MIPEPQ99797 713 aa13.82□□□□□ -0.2
PAF1-202ENST00000416728 P2RY12Q9H244 342 aa13.82□□□□□ -0.2
PAF1-202ENST00000416728 EIF2B3Q9NR50 452 aaKnown RBP13.82□□□□□ -0.2
PAF1-202ENST00000416728 ENAMQ9NRM1 1142 aa13.82□□□□□ -0.2
PAF1-202ENST00000416728 SEMA3GQ9NS98 782 aa13.82□□□□□ -0.2
PAF1-202ENST00000416728 RUVBL2Q9Y230 463 aaKnown RBP13.82□□□□□ -0.2
PAF1-202ENST00000416728 NTNG1Q9Y2I2 539 aa13.82□□□□□ -0.2
PAF1-202ENST00000416728 NFS1Q9Y697 457 aa13.82□□□□□ -0.2
PAF1-202ENST00000416728 FITM1A5D6W6 292 aa13.81□□□□□ -0.2
PAF1-202ENST00000416728 WIPF3A6NGB9 483 aa13.81□□□□□ -0.2
PAF1-202ENST00000416728 CTSVO60911 334 aa13.81□□□□□ -0.2
PAF1-202ENST00000416728 RPS3P23396 243 aaKnown RBP eCLIP13.81□□□□□ -0.2
PAF1-202ENST00000416728 PSMB5P28074 263 aa13.81□□□□□ -0.2
PAF1-202ENST00000416728 RPL22P35268 128 aaKnown RBP13.81□□□□□ -0.2
PAF1-202ENST00000416728 CCNFP41002 786 aa13.81□□□□□ -0.2
PAF1-202ENST00000416728 EIF3BP55884 814 aaKnown RBP13.81□□□□□ -0.2
PAF1-202ENST00000416728 BASP1P80723 227 aaKnown RBP13.81□□□□□ -0.2
PAF1-202ENST00000416728 HIF1AQ16665 826 aa13.81□□□□□ -0.2
PAF1-202ENST00000416728 WASHC2DQ5SRD0 308 aa13.81□□□□□ -0.2
PAF1-202ENST00000416728 CNSTQ6PJW8 725 aa13.81□□□□□ -0.2
PAF1-202ENST00000416728 PARP9Q8IXQ6 854 aa13.81□□□□□ -0.2
PAF1-202ENST00000416728 OR2L3Q8NG85 312 aa13.81□□□□□ -0.2
PAF1-202ENST00000416728 HMGCLL1Q8TB92 370 aa13.81□□□□□ -0.2
PAF1-202ENST00000416728 MAGEC3Q8TD91 643 aa13.81□□□□□ -0.2
PAF1-202ENST00000416728 COG1Q8WTW3 980 aa13.81□□□□□ -0.2
PAF1-202ENST00000416728 CRB3Q9BUF7 120 aa13.81□□□□□ -0.2
PAF1-202ENST00000416728 TSGA10Q9BZW7 698 aa13.81□□□□□ -0.2
PAF1-202ENST00000416728 IL22Q9GZX6 179 aa13.81□□□□□ -0.2
PAF1-202ENST00000416728 EPS8L2Q9H6S3 715 aa13.81□□□□□ -0.2
PAF1-202ENST00000416728 TREX1Q9NSU2 369 aa13.81□□□□□ -0.2
PAF1-202ENST00000416728 GUCA1BQ9UMX6 200 aa13.81□□□□□ -0.2
PAF1-202ENST00000416728 NOVA2Q9UNW9 492 aaKnown RBP13.81□□□□□ -0.2
PAF1-202ENST00000416728 CSAG2Q9Y5P2 127 aa13.81□□□□□ -0.2
PAF1-202ENST00000416728 MAU2Q9Y6X3 613 aa13.81□□□□□ -0.2
PAF1-202ENST00000416728 A0A0J9YVX5 310 aa13.8□□□□□ -0.2
PAF1-202ENST00000416728 HYKKA2RU49 373 aa13.8□□□□□ -0.2
PAF1-202ENST00000416728 KRT87PA6NCN2 255 aa13.8□□□□□ -0.2
PAF1-202ENST00000416728 VSTM2BA6NLU5 285 aa13.8□□□□□ -0.2
PAF1-202ENST00000416728 AP3B1O00203 1094 aa13.8□□□□□ -0.2
PAF1-202ENST00000416728 CLDN1O95832 211 aa13.8□□□□□ -0.2
PAF1-202ENST00000416728 OCA2Q04671 838 aa13.8□□□□□ -0.2
PAF1-202ENST00000416728 CCSMST1Q4G0I0 132 aa13.8□□□□□ -0.2
PAF1-202ENST00000416728 FRMPD2BQ6IN97 320 aa13.8□□□□□ -0.2
PAF1-202ENST00000416728 IGFL2Q6UWQ7 119 aa13.8□□□□□ -0.2
PAF1-202ENST00000416728 ST6GALNAC3Q8NDV1 305 aa13.8□□□□□ -0.2
PAF1-202ENST00000416728 OR11G2Q8NGC1 345 aa13.8□□□□□ -0.2
PAF1-202ENST00000416728 DNAJB14Q8TBM8 379 aa13.8□□□□□ -0.2
PAF1-202ENST00000416728 LHPPQ9H008 270 aa13.8□□□□□ -0.2
PAF1-202ENST00000416728 ZNF304Q9HCX3 659 aa13.8□□□□□ -0.2
PAF1-202ENST00000416728 BFARQ9NZS9 450 aa13.8□□□□□ -0.2
PAF1-202ENST00000416728 SPATA7Q9P0W8 599 aa13.8□□□□□ -0.2
PAF1-202ENST00000416728 ZC3H7BQ9UGR2 993 aaKnown RBP13.8□□□□□ -0.2
PAF1-202ENST00000416728 KLK4Q9Y5K2 254 aa13.8□□□□□ -0.2
PAF1-202ENST00000416728 UNC79Q9P2D8 2635 aa13.79□□□□□ -0.2
PAF1-202ENST00000416728 EIF2S1P05198 315 aaKnown RBP13.79□□□□□ -0.2
PAF1-202ENST00000416728 ERVK-10P10266 1014 aa13.79□□□□□ -0.2
PAF1-202ENST00000416728 COL8A1P27658 744 aa13.79□□□□□ -0.2
PAF1-202ENST00000416728 NMBRP28336 390 aa13.79□□□□□ -0.2
PAF1-202ENST00000416728 NPY2RP49146 381 aa13.79□□□□□ -0.2
PAF1-202ENST00000416728 CARSP49589 748 aaKnown RBP13.79□□□□□ -0.2
PAF1-202ENST00000416728 NAA25Q14CX7 972 aa13.79□□□□□ -0.2
PAF1-202ENST00000416728 RPS6KA1Q15418 735 aa13.79□□□□□ -0.2
PAF1-202ENST00000416728 CCNG2Q16589 344 aa13.79□□□□□ -0.2
PAF1-202ENST00000416728 MRNIPQ6NTE8 343 aa13.79□□□□□ -0.2
PAF1-202ENST00000416728 PRMT9Q6P2P2 845 aa13.79□□□□□ -0.2
PAF1-202ENST00000416728 C4orf22Q6V702 233 aa13.79□□□□□ -0.2
PAF1-202ENST00000416728 RNF44Q7L0R7 432 aa13.79□□□□□ -0.2
PAF1-202ENST00000416728 SDCCAG8Q86SQ7 713 aaPredicted RBP13.79□□□□□ -0.2
PAF1-202ENST00000416728 DTWD1Q8N5C7 304 aa13.79□□□□□ -0.2
PAF1-202ENST00000416728 SPC24Q8NBT2 197 aa13.79□□□□□ -0.2
PAF1-202ENST00000416728 OR2A1Q8NGT9 310 aa13.79□□□□□ -0.2
PAF1-202ENST00000416728 STT3BQ8TCJ2 826 aa13.79□□□□□ -0.2
PAF1-202ENST00000416728 MIEF2Q96C03 454 aa13.79□□□□□ -0.2
PAF1-202ENST00000416728 THOC3Q96J01 351 aaKnown RBP13.79□□□□□ -0.2
PAF1-202ENST00000416728 CNDP1Q96KN2 507 aa13.79□□□□□ -0.2
PAF1-202ENST00000416728 ZNF282Q9UDV7 671 aaPredicted RBP13.79□□□□□ -0.2
PAF1-202ENST00000416728 TSR3Q9UJK0 312 aaKnown RBP13.79□□□□□ -0.2
PAF1-202ENST00000416728 HIVEP3Q5T1R4 2406 aa13.79□□□□□ -0.2
PAF1-202ENST00000416728 NBPF19A0A087WUL8 3843 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 LOC105369274A0A096LPK9 316 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 LOC102723532A0A0G2JNH3 316 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 A0A1W2PPV9 198 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 MAP2K7O14733 419 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 PFDN6O15212 129 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 NRP2O60462 931 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 VAPBO95292 243 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 MED26O95402 600 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 ACPPP15309 386 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 CMPK1P30085 196 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 FMO4P31512 558 aa13.78□□□□□ -0.2
PAF1-202ENST00000416728 TSFMP43897 325 aaKnown RBP13.78□□□□□ -0.2
PAF1-202ENST00000416728 KLC1Q07866 573 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms