RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 PEX13Q92968 403 aa11.91□□□□□ -0.5
NCKIPSD-203ENST00000415281 TRIM56Q9BRZ2 755 aaKnown RBP11.91□□□□□ -0.5
NCKIPSD-203ENST00000415281 SLC7A5P2Q9GIP4 190 aa11.91□□□□□ -0.5
NCKIPSD-203ENST00000415281 SLC26A1Q9H2B4 701 aa11.91□□□□□ -0.5
NCKIPSD-203ENST00000415281 LRRC4CQ9HCJ2 640 aa11.91□□□□□ -0.5
NCKIPSD-203ENST00000415281 SLC6A20Q9NP91 592 aa11.91□□□□□ -0.5
NCKIPSD-203ENST00000415281 EIF2B3Q9NR50 452 aaKnown RBP11.91□□□□□ -0.5
NCKIPSD-203ENST00000415281 STOX2Q9P2F5 926 aaPredicted RBP11.91□□□□□ -0.5
NCKIPSD-203ENST00000415281 RNF14Q9UBS8 474 aa11.91□□□□□ -0.5
NCKIPSD-203ENST00000415281 ERRFI1Q9UJM3 462 aaPredicted RBP11.91□□□□□ -0.5
NCKIPSD-203ENST00000415281 NEU2Q9Y3R4 380 aa11.91□□□□□ -0.5
NCKIPSD-203ENST00000415281 KLK4Q9Y5K2 254 aa11.91□□□□□ -0.5
NCKIPSD-203ENST00000415281 HS3ST3B1Q9Y662 390 aa11.91□□□□□ -0.5
NCKIPSD-203ENST00000415281 DOPEY1Q5JWR5 2465 aa11.91□□□□□ -0.5
NCKIPSD-203ENST00000415281 HEATR5BQ9P2D3 2071 aa11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 LOC105369274A0A096LPK9 316 aa11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 LOC102723532A0A0G2JNH3 316 aa11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 C9J4A7 227 aa11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 CLDN1O95832 211 aa11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 COL8A1P27658 744 aa11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 FOLR3P41439 243 aa11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 EFNA3P52797 238 aa11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 RRADP55042 308 aa11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 KCNJ11Q14654 390 aa11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 SYTL3Q4VX76 610 aa11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 C4orf17Q53FE4 359 aa11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 FASTKD1Q53R41 847 aaKnown RBP11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 FHL5Q5TD97 284 aa11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 VWA5B1Q5TIE3 1220 aa11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 ANKRD22Q5VYY1 191 aa11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 KIRREL2Q6UWL6 708 aa11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 TTLL10Q6ZVT0 673 aa11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 OR4N4Q8N0Y3 316 aa11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 EFCAB3Q8N7B9 438 aa11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 HMGCLL1Q8TB92 370 aa11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 SSC4DQ8WTU2 575 aa11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 SLAMF7Q9NQ25 335 aa11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 CATSPERZQ9NTU4 200 aa11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 ASIC3Q9UHC3 531 aa11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 PCYOX1Q9UHG3 505 aa11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 B3GNT3Q9Y2A9 372 aa11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 PADI2Q9Y2J8 665 aa11.9□□□□□ -0.5
NCKIPSD-203ENST00000415281 CSMD1Q96PZ7 3565 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 CCDC188H7C350 402 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 AGPSO00116 658 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 PRMT5O14744 637 aaPredicted RBP11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 DSCR3O14972 297 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 MAP3K7O43318 606 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 AVILO75366 819 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 AGFG2O95081 481 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 MATN4O95460 622 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 S1PR4O95977 384 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 F7P08709 466 aaPredicted RBP11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 TPSB2P20231 275 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 ALAS2P22557 587 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 RPS3P23396 243 aaKnown RBP eCLIP11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 MMP11P24347 488 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 MGAT1P26572 445 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 BDKRB1P46663 353 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 OR1D4P47884 311 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 NPY2RP49146 381 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 MRPS25P82663 173 aaKnown RBP11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 SARNPP82979 210 aaKnown RBP11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 CDK16Q00536 496 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 DR1Q01658 176 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 NR6A1Q15406 480 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 SF1Q15637 639 aaKnown RBP11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 TPSAB1Q15661 275 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 LRRC8BQ6P9F7 803 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 SHISA6Q6ZSJ9 500 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 NLRP9Q7RTR0 991 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 DCUN1D3Q8IWE4 304 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 AGGF1Q8N302 714 aaeCLIP11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 ARHGEF39Q8N4T4 335 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 PPHLN1Q8NEY8 458 aaKnown RBP11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 LPGAT1Q92604 370 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 MFSD3Q96ES6 412 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 FER1L6-AS2Q96M78 137 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 IP6K3Q96PC2 410 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 KRT12Q99456 494 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 SLC30A3Q99726 388 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 NDC1Q9BTX1 674 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 KIFC1Q9BW19 673 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 CUTCQ9NTM9 273 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 SYBUQ9NX95 663 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 BFARQ9NZS9 450 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 CTSFQ9UBX1 484 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 NDOR1Q9UHB4 597 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 GPN3Q9UHW5 284 aaPredicted RBP11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 SRPK3Q9UPE1 567 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 MED16Q9Y2X0 877 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 PCDHGA10Q9Y5H3 936 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 CROCCQ5TZA2 2017 aa11.89□□□□□ -0.51
NCKIPSD-203ENST00000415281 IGKV1-8A0A0C4DH67 115 aa11.88□□□□□ -0.51
NCKIPSD-203ENST00000415281 A0A1B0GX78 115 aa11.88□□□□□ -0.51
NCKIPSD-203ENST00000415281 TARM1B6A8C7 271 aa11.88□□□□□ -0.51
NCKIPSD-203ENST00000415281 GOLGA8KD6RF30 607 aa11.88□□□□□ -0.51
NCKIPSD-203ENST00000415281 GOLGA8TH3BQL2 631 aa11.88□□□□□ -0.51
NCKIPSD-203ENST00000415281 AP3B1O00203 1094 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms