RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 SGO1Q5FBB7 561 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 PNCKQ6P2M8 343 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 USP43Q70EL4 1123 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 TTC9BQ8N6N2 239 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 BEND7Q8N7W2 519 aaPredicted RBP17.17■□□□□ 0.34
SDCBP-202ENST00000413219 OR10Q1Q8NGQ4 319 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 HHIPQ96QV1 700 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 KIF17Q9P2E2 1029 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 SLCO3A1Q9UIG8 710 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 POU2F3Q9UKI9 436 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 SNPHO15079 494 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 TLR5O60602 858 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 PRPH2P23942 346 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 MAPK1P28482 360 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 GDF5P43026 501 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 TRPC1P48995 793 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 ITGA1P56199 1179 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 PRKCDQ05655 676 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 ELP6Q0PNE2 266 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 ABRQ12979 859 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 SLC13A2Q13183 592 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 LAPTM4AQ15012 233 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 TBCEQ15813 527 aaPredicted RBP17.16■□□□□ 0.34
SDCBP-202ENST00000413219 MLIPQ5VWP3 458 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 DOK6Q6PKX4 331 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 CCDC71Q8IV32 467 aaPredicted RBP17.16■□□□□ 0.34
SDCBP-202ENST00000413219 RBFAQ8N0V3 343 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 AMER2Q8N7J2 671 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 POC5Q8NA72 575 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 ATAD1Q8NBU5 361 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 SPATA17Q96L03 361 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 ACPTQ9BZG2 426 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 HOXD1Q9GZZ0 328 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.16■□□□□ 0.348e-21■■■■■ 43.8
SDCBP-202ENST00000413219 CCSER2Q9H7U1 834 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 PLCXD1Q9NUJ7 323 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 CCDC59Q9P031 241 aaKnown RBP17.16■□□□□ 0.34
SDCBP-202ENST00000413219 PNMA8BQ9ULN7 279 aaPredicted RBP17.16■□□□□ 0.34
SDCBP-202ENST00000413219 DLGAP4Q9Y2H0 992 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 SAMHD1Q9Y3Z3 626 aaKnown RBP17.16■□□□□ 0.34
SDCBP-202ENST00000413219 MYADML2A6NDP7 307 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 ASNA1O43681 348 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 B4GALT3O60512 393 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 CLDN9O95484 217 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 RHOCP08134 193 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 HMGCLP35914 325 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 CTSKP43235 329 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 SLC11A2P49281 568 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 DSC1Q08554 894 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 NPRL3Q12980 569 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 STEAP3Q658P3 488 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 NCEH1Q6PIU2 408 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 AHSA2Q719I0 299 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 EIF3MQ7L2H7 374 aaKnown RBP17.16■□□□□ 0.34
SDCBP-202ENST00000413219 ZNF551Q7Z340 670 aaPredicted RBP17.16■□□□□ 0.34
SDCBP-202ENST00000413219 CPA6Q8N4T0 437 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 ATG16L2Q8NAA4 619 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 APOL5Q9BWW9 433 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 GABARAPL3Q9BY60 117 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 REEP1Q9H902 201 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 RNF6Q9Y252 685 aa17.16■□□□□ 0.34
SDCBP-202ENST00000413219 NPIPB8E9PQR5 432 aa17.15■□□□□ 0.34
SDCBP-202ENST00000413219 RFXANKO14593 260 aa17.15■□□□□ 0.34
SDCBP-202ENST00000413219 SYN3O14994 580 aa17.15■□□□□ 0.34
SDCBP-202ENST00000413219 PCDHGA12O60330 932 aa17.15■□□□□ 0.34
SDCBP-202ENST00000413219 ACPPP15309 386 aa17.15■□□□□ 0.34
SDCBP-202ENST00000413219 LIPAP38571 399 aa17.15■□□□□ 0.34
SDCBP-202ENST00000413219 THPOP40225 353 aa17.15■□□□□ 0.34
SDCBP-202ENST00000413219 CDKN2CP42773 168 aa17.15■□□□□ 0.34
SDCBP-202ENST00000413219 RPP38P78345 283 aaKnown RBP17.15■□□□□ 0.34
SDCBP-202ENST00000413219 VMACQ2NL98 169 aa17.15■□□□□ 0.34
SDCBP-202ENST00000413219 LRIT3Q3SXY7 679 aa17.15■□□□□ 0.34
SDCBP-202ENST00000413219 COLEC12Q5KU26 742 aa17.15■□□□□ 0.34
SDCBP-202ENST00000413219 FAM171A1Q5VUB5 890 aa17.15■□□□□ 0.34
SDCBP-202ENST00000413219 SERPINA9Q86WD7 417 aa17.15■□□□□ 0.34
SDCBP-202ENST00000413219 ZBTB2Q8N680 514 aa17.15■□□□□ 0.34
SDCBP-202ENST00000413219 APH1BQ8WW43 257 aa17.15■□□□□ 0.34
SDCBP-202ENST00000413219 HTRA1Q92743 480 aa17.15■□□□□ 0.34
SDCBP-202ENST00000413219 PROX1Q92786 737 aa17.15■□□□□ 0.34
SDCBP-202ENST00000413219 NELL1Q92832 810 aa17.15■□□□□ 0.34
SDCBP-202ENST00000413219 HRASLS5Q96KN8 279 aa17.15■□□□□ 0.34
SDCBP-202ENST00000413219 EHD1Q9H4M9 534 aa17.15■□□□□ 0.34
SDCBP-202ENST00000413219 SCN10AQ9Y5Y9 1956 aa17.14■□□□□ 0.34
SDCBP-202ENST00000413219 GPR39O43194 453 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 TBX1O43435 398 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 DYRK3O43781 588 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 STK16O75716 305 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 KCNK2O95069 426 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 EPHA2P29317 976 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 KDELR2P33947 212 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 TGFBR1P36897 503 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 VLDLRP98155 873 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 CREMQ03060 361 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 FPGSQ05932 587 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 CDKL4Q5MAI5 379 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 CBLL1Q75N03 491 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 CHST9Q7L1S5 443 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 ZZZ3Q8IYH5 903 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 ENTHD1Q8IYW4 607 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 KBTBD8Q8NFY9 601 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms