RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 COL21A1Q96P44 957 aa13.46□□□□□ -0.25
VAPA-202ENST00000400000 EIF3KQ9UBQ5 218 aaKnown RBP13.46□□□□□ -0.25
VAPA-202ENST00000400000 A0A1W2PRB8 838 aa13.46□□□□□ -0.25
VAPA-202ENST00000400000 J3QLW9 94 aa13.46□□□□□ -0.25
VAPA-202ENST00000400000 EDF1O60869 148 aaKnown RBP13.46□□□□□ -0.25
VAPA-202ENST00000400000 ITGA5P08648 1049 aa13.46□□□□□ -0.25
VAPA-202ENST00000400000 ZNF19P17023 458 aa13.46□□□□□ -0.25
VAPA-202ENST00000400000 PSMA1P25786 263 aaKnown RBP13.46□□□□□ -0.25
VAPA-202ENST00000400000 S100A10P60903 97 aa13.46□□□□□ -0.25
VAPA-202ENST00000400000 C4orf46Q504U0 113 aa13.46□□□□□ -0.25
VAPA-202ENST00000400000 PAQR3Q6TCH7 311 aa13.46□□□□□ -0.25
VAPA-202ENST00000400000 NPLOC4Q8TAT6 608 aa13.46□□□□□ -0.25
VAPA-202ENST00000400000 DNAJA4Q8WW22 397 aaPredicted RBP13.46□□□□□ -0.25
VAPA-202ENST00000400000 EZH1Q92800 747 aaPredicted RBP13.46□□□□□ -0.25
VAPA-202ENST00000400000 CRELD1Q96HD1 420 aa13.46□□□□□ -0.25
VAPA-202ENST00000400000 DKKL1Q9UK85 242 aa13.46□□□□□ -0.25
VAPA-202ENST00000400000 UTS2RQ9UKP6 389 aa13.46□□□□□ -0.25
VAPA-202ENST00000400000 REXO2Q9Y3B8 237 aaKnown RBP13.46□□□□□ -0.25
VAPA-202ENST00000400000 CA12O43570 354 aa13.46□□□□□ -0.26
VAPA-202ENST00000400000 SOX14O95416 240 aa13.46□□□□□ -0.26
VAPA-202ENST00000400000 DHFRP00374 187 aa13.46□□□□□ -0.26
VAPA-202ENST00000400000 OR3A3P47888 321 aa13.46□□□□□ -0.26
VAPA-202ENST00000400000 OR3A2P47893 321 aa13.46□□□□□ -0.26
VAPA-202ENST00000400000 PLEKHG6Q3KR16 790 aa13.46□□□□□ -0.26
VAPA-202ENST00000400000 EGFLAMQ63HQ2 1017 aa13.46□□□□□ -0.26
VAPA-202ENST00000400000 TATDN1Q6P1N9 297 aa13.46□□□□□ -0.26
VAPA-202ENST00000400000 ERVK-18Q9QC07 812 aa13.46□□□□□ -0.26
VAPA-202ENST00000400000 C11orf98E9PRG8 122 aa13.46□□□□□ -0.26
VAPA-202ENST00000400000 PLATP00750 562 aa13.46□□□□□ -0.26
VAPA-202ENST00000400000 C1orf61Q13536 156 aa13.46□□□□□ -0.26
VAPA-202ENST00000400000 DSG2Q14126 1118 aa13.46□□□□□ -0.26
VAPA-202ENST00000400000 SIRPB2Q5JXA9 342 aa13.46□□□□□ -0.26
VAPA-202ENST00000400000 TMEM198Q66K66 360 aa13.46□□□□□ -0.26
VAPA-202ENST00000400000 HSDL2Q6YN16 418 aa13.46□□□□□ -0.26
VAPA-202ENST00000400000 PRICKLE1Q96MT3 831 aaPredicted RBP13.46□□□□□ -0.26
VAPA-202ENST00000400000 LGR4Q9BXB1 951 aa13.46□□□□□ -0.26
VAPA-202ENST00000400000 UPK3BL1B0FP48 263 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 UPK3BL2E5RIL1 263 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 ARVCFO00192 962 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 SYN3O14994 580 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 NOL4O94818 638 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 POLR2CP19387 275 aaPredicted RBP13.45□□□□□ -0.26
VAPA-202ENST00000400000 DGKQP52824 942 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 TM9SF2Q99805 663 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 DUSP26Q9BV47 211 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 GABRQQ9UN88 632 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 CLUHO75153 1309 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 MPIP34949 423 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 ILF2Q12905 390 aaKnown RBP13.45□□□□□ -0.26
VAPA-202ENST00000400000 SOWAHAQ2M3V2 549 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 ZNF676Q8N7Q3 588 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 YIPF7Q8N8F6 280 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 OR5T2Q8NGG2 359 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 NFKBIDQ8NI38 313 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 ZNF285Q96NJ3 590 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 SUV39H2Q9H5I1 410 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 SP140LQ9H930 580 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 A0A0G2JLL6 359 aaPredicted RBP13.45□□□□□ -0.26
VAPA-202ENST00000400000 TULP2O00295 520 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 E2F3O00716 465 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 SCDO00767 359 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 MUSKO15146 869 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 PRRT3Q5FWE3 981 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 PRPF38BQ5VTL8 546 aaKnown RBP13.45□□□□□ -0.26
VAPA-202ENST00000400000 PLET1Q6UQ28 207 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 SSX6Q7RTT6 188 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 PRRT2Q7Z6L0 340 aaPredicted RBP13.45□□□□□ -0.26
VAPA-202ENST00000400000 LAPTM4BQ86VI4 370 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 SRFBP1Q8NEF9 429 aaKnown RBP13.45□□□□□ -0.26
VAPA-202ENST00000400000 BRI3BPQ8WY22 251 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 MAGEH1Q9H213 219 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 TLR9Q9NR96 1032 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 PCDHGA6Q9Y5G7 932 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 ITM2AO43736 263 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 ZNF234Q14588 700 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 BMT2Q1RMZ1 405 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 OR4F3Q6IEY1 312 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 CROCCP3Q8IVE0 287 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 OR8S1Q8NH09 359 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 XKR8Q9H6D3 395 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 TMEM165Q9HC07 324 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 CYP11A1P05108 521 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 NUDT17P0C025 328 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 PEX2P28328 305 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 RPS14P62263 151 aaKnown RBP13.45□□□□□ -0.26
VAPA-202ENST00000400000 LCP2Q13094 533 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 ZFP69Q49AA0 526 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 SLC35F1Q5T1Q4 408 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 OGFRL1Q5TC84 451 aaPredicted RBP13.45□□□□□ -0.26
VAPA-202ENST00000400000 JAGN1Q8N5M9 183 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 DENND6BQ8NEG7 585 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 MR1Q95460 341 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 BEX2Q9BXY8 128 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 BEX1Q9HBH7 125 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 FZD3Q9NPG1 666 aa13.45□□□□□ -0.26
VAPA-202ENST00000400000 AIREO43918 545 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 RB1P06400 928 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 MRPL3P09001 348 aaKnown RBP13.44□□□□□ -0.26
VAPA-202ENST00000400000 ASPAP45381 313 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 BLKP51451 505 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms