RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 ZNF20P17024 532 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 ZNF84P51523 738 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 RAB39AQ14964 217 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 KPNB1Q14974 876 aaKnown RBP7.76□□□□□ -1.17
USP47-203ENST00000399455 RNF111Q6ZNA4 994 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 LDB1Q86U70 411 aaPredicted RBP7.76□□□□□ -1.17
USP47-203ENST00000399455 PACS2Q86VP3 889 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 DAW1Q8N136 415 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 OR8H2Q8N162 312 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 PRELID2Q8N945 189 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 SNIP1Q8TAD8 396 aaKnown RBP7.76□□□□□ -1.17
USP47-203ENST00000399455 CPT1BQ92523 772 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 NR4A3Q92570 626 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 FCRL4Q96PJ5 515 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 UHRF1Q96T88 793 aaPredicted RBP7.76□□□□□ -1.17
USP47-203ENST00000399455 C1QTNF1Q9BXJ1 281 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 NOD2Q9HC29 1040 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 MAGEE1Q9HCI5 957 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 PIGVQ9NUD9 493 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 NLE1Q9NVX2 485 aaPredicted RBP7.76□□□□□ -1.17
USP47-203ENST00000399455 ASB6Q9NWX5 421 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 NRAPQ86VF7 1730 aa7.76□□□□□ -1.17
USP47-203ENST00000399455 TRIM38O00635 465 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 ASNA1O43681 348 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 SDC3O75056 442 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 ADRB3P13945 408 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 SRP54P61011 504 aaKnown RBP7.75□□□□□ -1.17
USP47-203ENST00000399455 RTP2Q5QGT7 225 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 ZNF57Q68EA5 555 aaPredicted RBP7.75□□□□□ -1.17
USP47-203ENST00000399455 FIBINQ8TAL6 211 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 FRS2Q8WU20 508 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 SLC35F5Q8WV83 523 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 CDC6Q99741 560 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 TMED5Q9Y3A6 229 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 PCDHGB1Q9Y5G3 927 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 SESN1Q9Y6P5 492 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 DNAJC25-GNG10A0A024R161 153 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 KIAA0355O15063 1070 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 PAK4O96013 591 aaPredicted RBP7.75□□□□□ -1.17
USP47-203ENST00000399455 NR2F6P10588 404 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 COX4I1P13073 169 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 PCYT1AP49585 367 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 GALK1P51570 392 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 ALG1LQ6GMV1 187 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 TMPPEQ6ZT21 453 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 USP53Q70EK8 1073 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 ADGRD2Q7Z7M1 963 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 NRROSQ86YC3 692 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 LIX1LQ8IVB5 337 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 MYLIPQ8WY64 445 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 AP3S1Q92572 193 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 ADAP2Q9NPF8 381 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.75□□□□□ -1.17
USP47-203ENST00000399455 SPATA7Q9P0W8 599 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 C3orf18Q9UK00 162 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 ANKRD36CQ5JPF3 1778 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 TRIM64A6NGJ6 449 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 H0YC42 278 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 STX16-NPEPL1H3BU86 382 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 STX16O14662 325 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 MPZL2O60487 215 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 BANF1O75531 89 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 IDH2P48735 452 aaKnown RBP7.75□□□□□ -1.17
USP47-203ENST00000399455 RIN1Q13671 783 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 TMEM44Q2T9K0 475 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 GPRC6AQ5T6X5 926 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 TMCO2Q7Z6W1 182 aaPredicted RBP7.75□□□□□ -1.17
USP47-203ENST00000399455 NXNL1Q96CM4 212 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 PCYT2Q99447 389 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 GPATCH1Q9BRR8 931 aaKnown RBP7.75□□□□□ -1.17
USP47-203ENST00000399455 TMEM184CQ9NVA4 438 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 DMAC2Q9NW81 257 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 WRAP73Q9P2S5 460 aaPredicted RBP7.75□□□□□ -1.17
USP47-203ENST00000399455 B4GALT6Q9UBX8 382 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 ZNF180Q9UJW8 692 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 PLAGL1Q9UM63 463 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 ITGB4P16144 1822 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 PAPPA2Q9BXP8 1791 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 KIAA0319Q5VV43 1072 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 CYP2R1Q6VVX0 501 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 DHRSXQ8N5I4 330 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 CPSF7Q8N684 471 aaKnown RBP7.75□□□□□ -1.17
USP47-203ENST00000399455 SNX33Q8WV41 574 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 SGCDQ92629 289 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 FGF13Q92913 245 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 DSN1Q9H410 356 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 EPB41L1Q9H4G0 881 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 A0A0J9YYE9 177 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 A8MVJ9 347 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 J3KR12 359 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 PRAMEF12O95522 483 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 MPC1LP0DKB6 136 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 PRKCHP24723 683 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 TERF2Q15554 542 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 GLYATL1Q969I3 302 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 KIAA1191Q96A73 305 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 TRIB3Q96RU7 358 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 TRIM39Q9HCM9 518 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 HPF1Q9NWY4 346 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 EIF2B4Q9UI10 523 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms