RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 CHST15Q7LFX5 561 aaPredicted RBP11.08□□□□□ -0.64
C4orf3-201ENST00000399075 R3HCC1LQ7Z5L2 792 aaKnown RBP11.08□□□□□ -0.64
C4orf3-201ENST00000399075 GTF2IRD2Q86UP8 949 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 PGBD3Q8N328 593 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 TBC1D15Q8TC07 691 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 FBLIM1Q8WUP2 373 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 ASIC4Q96FT7 647 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 PYURFQ96I23 114 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 PHF12Q96QT6 1004 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 NDEL1Q9GZM8 345 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 GABARAPL1Q9H0R8 117 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 GPN2Q9H9Y4 310 aaPredicted RBP11.08□□□□□ -0.64
C4orf3-201ENST00000399075 PRMT3O60678 531 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 PEX14O75381 377 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 SERPINA1P01009 418 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 INHBBP09529 407 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 ITGAMP11215 1152 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 SDC1P18827 310 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 CCNA2P20248 432 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 RYKP34925 604 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 IST1P53990 364 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 RAD23AP54725 363 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 AP1S2P56377 157 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 PTSQ03393 145 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 NFATC3Q12968 1075 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 MTAPQ13126 283 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 KCNAB2Q13303 367 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 ZNF829Q3KNS6 432 aaPredicted RBP11.07□□□□□ -0.64
C4orf3-201ENST00000399075 FGD3Q5JSP0 725 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 ELMSAN1Q6PJG2 1045 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 SPESP1Q6UW49 350 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 NEK10Q6ZWH5 1172 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 BBS7Q8IWZ6 715 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 GPR65Q8IYL9 337 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 PHACTR4Q8IZ21 702 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 SPARTQ8N0X7 666 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 CLHC1Q8NHS4 586 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 CSGALNACT1Q8TDX6 532 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 MRPS31Q92665 395 aaKnown RBP11.07□□□□□ -0.64
C4orf3-201ENST00000399075 BORCS5Q969J3 196 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 ZNF566Q969W8 418 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 ZNF641Q96N77 438 aaPredicted RBP11.07□□□□□ -0.64
C4orf3-201ENST00000399075 NAA50Q9GZZ1 169 aaKnown RBP11.07□□□□□ -0.64
C4orf3-201ENST00000399075 SUV39H2Q9H5I1 410 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 TBCCD1Q9NVR7 557 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 CFAP97Q9P2B7 532 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 CLEC4EQ9ULY5 219 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 CARNS1A5YM72 827 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 GFYI3L273 518 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 B4GAT1O43505 415 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 CCNDBP1O95273 360 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 HIST1H2AGP0C0S8 130 aaPredicted RBP11.07□□□□□ -0.64
C4orf3-201ENST00000399075 HIST1H2ADP20671 130 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 MATN1P21941 496 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 PIGAP37287 484 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 NEK2P51955 445 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 ABRQ12979 859 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 ZNF691Q5VV52 312 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 C22orf39Q6P5X5 142 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 SERPINA11Q86U17 422 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 RAVER1Q8IY67 606 aaKnown RBP11.07□□□□□ -0.64
C4orf3-201ENST00000399075 CHPFQ8IZ52 775 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 NETO1Q8TDF5 533 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 SNX19Q92543 992 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 HIST1H2AHQ96KK5 128 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 HIST1H2AJQ99878 128 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 H2AFJQ9BTM1 129 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 CEP44Q9C0F1 390 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 ADNPQ9H2P0 1102 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 UTS2RQ9UKP6 389 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 PPT2Q9UMR5 302 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 SAMD4AQ9UPU9 718 aaKnown RBP11.07□□□□□ -0.64
C4orf3-201ENST00000399075 LOC100130705A0A1B0GUX0 176 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 KPNA5O15131 536 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 AOC2O75106 756 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 LHCGRP22888 699 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 TPD52P55327 224 aaPredicted RBP11.07□□□□□ -0.64
C4orf3-201ENST00000399075 CD47Q08722 323 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 ZXDCQ2QGD7 858 aaPredicted RBP11.07□□□□□ -0.64
C4orf3-201ENST00000399075 ANKRD26P1Q6NSI1 321 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 SHQ1Q6PI26 577 aaKnown RBP11.07□□□□□ -0.64
C4orf3-201ENST00000399075 DET1Q7L5Y6 550 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 DDX53Q86TM3 631 aaKnown RBP11.07□□□□□ -0.64
C4orf3-201ENST00000399075 RASGRP3Q8IV61 690 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 NELL1Q92832 810 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 PALMDQ9NP74 551 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 DNAJC11Q9NVH1 559 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 ATAD3AQ9NVI7 634 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 TMEFF2Q9UIK5 374 aaPredicted RBP11.07□□□□□ -0.64
C4orf3-201ENST00000399075 ORC6Q9Y5N6 252 aa11.07□□□□□ -0.64
C4orf3-201ENST00000399075 PABPN1LA6NDY0 278 aaKnown RBP11.06□□□□□ -0.64
C4orf3-201ENST00000399075 A8MX80 341 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 NOBOXO60393 691 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 UGDHO60701 494 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 PQBP1O60828 265 aaKnown RBP11.06□□□□□ -0.64
C4orf3-201ENST00000399075 CKMP06732 381 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 CCDC159P0C7I6 412 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 IL7RP16871 459 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 AMD1P17707 334 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 CYP2A7P20853 494 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms