RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 SLC30A4O14863 429 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 INHAP05111 366 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 GTF2E2P29084 291 aaKnown RBP10.51□□□□□ -0.73
CCDC40-204ENST00000397545 CBX2Q14781 532 aaPredicted RBP10.51□□□□□ -0.73
CCDC40-204ENST00000397545 HLA-DQA1Q5Y7H0 255 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 C1orf52Q8N6N3 182 aaKnown RBP10.51□□□□□ -0.73
CCDC40-204ENST00000397545 ZNF784Q8NCA9 323 aaPredicted RBP10.51□□□□□ -0.73
CCDC40-204ENST00000397545 OR8H1Q8NGG4 311 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 ZIC5Q96T25 663 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 AIF1LQ9BQI0 150 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 ABCB8Q9NUT2 735 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 ZIM2Q9NZV7 527 aa10.51□□□□□ -0.73
CCDC40-204ENST00000397545 LCHNA4D1U4 455 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 MEIS3P2A8K0S8 358 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 HCN1O60741 890 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 SNNO75324 88 aaPredicted RBP10.5□□□□□ -0.73
CCDC40-204ENST00000397545 DHFRP00374 187 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 RLN1P04808 185 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 NUP62P37198 522 aaPredicted RBP10.5□□□□□ -0.73
CCDC40-204ENST00000397545 ALDH3A2P51648 485 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 RAB39AQ14964 217 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 PTCHD3Q3KNS1 767 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 CYP27C1Q4G0S4 372 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 CLEC12AQ5QGZ9 265 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 MARVELD2Q8N4S9 558 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.5□□□□□ -0.73
CCDC40-204ENST00000397545 POP5Q969H6 163 aaKnown RBP10.5□□□□□ -0.73
CCDC40-204ENST00000397545 ZFP3Q96NJ6 502 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 PAAF1Q9BRP4 392 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 OR51V1Q9H2C8 321 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 THG1LQ9NWX6 298 aaKnown RBP10.5□□□□□ -0.73
CCDC40-204ENST00000397545 EBF1Q9UH73 591 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 FBXW2Q9UKT8 454 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 FZD4Q9ULV1 537 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 PCDHGB3Q9Y5G1 929 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 ZNF780BQ9Y6R6 833 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 CCL16O15467 120 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 OR1F1O43749 312 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 INMTO95050 263 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 GCAP28676 217 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 ACLYP53396 1101 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 LSAMPQ13449 338 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 TNFAIP8L3Q5GJ75 292 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 TECRLQ5HYJ1 363 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 MS4A13Q5J8X5 152 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 MARCH8Q5T0T0 291 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.5□□□□□ -0.738e-6■■■■■ 27.9
CCDC40-204ENST00000397545 ZNF544Q6NX49 715 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 POMZP3Q6PJE2 187 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 GOLGA7Q7Z5G4 137 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 ADGRG6Q86SQ4 1221 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 AUTS2Q8WXX7 1259 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 TIFAQ96CG3 184 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 SLC29A1Q99808 456 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 GAL3ST1Q99999 423 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 SMOXQ9NWM0 555 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 ZNF451Q9Y4E5 1061 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 SPIN1Q9Y657 262 aaPredicted RBP10.5□□□□□ -0.73
CCDC40-204ENST00000397545 PARP14Q460N5 1801 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 STATHP02808 62 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 ADH1AP07327 375 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 C8BP07358 591 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 SUZ12Q15022 739 aaKnown RBP10.5□□□□□ -0.73
CCDC40-204ENST00000397545 TYSND1Q2T9J0 566 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 ZNF789Q5FWF6 425 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 TXNDC8Q6A555 127 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 METTL3Q86U44 580 aaKnown RBP10.5□□□□□ -0.73
CCDC40-204ENST00000397545 CNIH3Q8TBE1 160 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 COL21A1Q96P44 957 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 TBX5Q99593 518 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 VPS29Q9UBQ0 182 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 FAM92AA1XBS5 289 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 PIRO00625 290 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 SLC9A3R1O14745 358 aaPredicted RBP10.5□□□□□ -0.73
CCDC40-204ENST00000397545 SLC22A1O15245 554 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 GRM6O15303 877 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 PCDH7O60245 1069 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 SEMA3DO95025 777 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 DHRS4L1P0CG22 281 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 LAMP2P13473 410 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 KCNE1P15382 129 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 VEGFBP49765 207 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 LBX1P52954 281 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 TUBA4AP68366 448 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 UNC50Q53HI1 259 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 RBM48Q5RL73 367 aaKnown RBP10.5□□□□□ -0.73
CCDC40-204ENST00000397545 TMEM236Q5W0B7 351 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 FRG2Q64ET8 278 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 SNX20Q7Z614 316 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 FAM98AQ8NCA5 519 aaKnown RBP10.5□□□□□ -0.73
CCDC40-204ENST00000397545 ING5Q8WYH8 240 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 SLC38A4Q969I6 547 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 TRNT1Q96Q11 434 aaKnown RBP10.5□□□□□ -0.73
CCDC40-204ENST00000397545 FRG2BQ96QU4 278 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 LMAN2LQ9H0V9 348 aa10.5□□□□□ -0.73
CCDC40-204ENST00000397545 LCTP09848 1927 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 FAM172BPA6NC97 362 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 SOCS2O14508 198 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 DCLK1O15075 740 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 KHDRBS3O75525 346 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms