RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 UFM1P61960 85 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 ARF5P84085 180 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 DAB2P98082 770 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 RAPSNQ13702 412 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 CLCA4Q14CN2 919 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 ARMC12Q5T9G4 340 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 TTC23Q5W5X9 447 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-204ENST00000394164 HACD2Q6Y1H2 254 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 ANKS3Q6ZW76 656 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 SYVN1Q86TM6 617 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 PARP16Q8N5Y8 322 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 STAG3L4Q8TBR4 150 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 FUBP1Q96AE4 644 aaKnown RBP9.72□□□□□ -0.85
PSEN1-204ENST00000394164 FYTTD1Q96QD9 318 aaKnown RBP9.72□□□□□ -0.85
PSEN1-204ENST00000394164 VPS35Q96QK1 796 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 PSKH2Q96QS6 385 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 TRIB3Q96RU7 358 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 VN1R3Q9BXE9 311 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.72□□□□□ -0.85
PSEN1-204ENST00000394164 RIBC2Q9H4K1 309 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 PRM3Q9NNZ6 103 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 TRPM5Q9NZQ8 1165 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 CRNNQ9UBG3 495 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-204ENST00000394164 TRMT6Q9UJA5 497 aaKnown RBP9.72□□□□□ -0.85
PSEN1-204ENST00000394164 OAS3Q9Y6K5 1087 aaKnown RBP9.72□□□□□ -0.85
PSEN1-204ENST00000394164 A0A0X1KG70 313 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 FAM92AA1XBS5 289 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 ZW10O43264 779 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 RECQL5O94762 991 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-204ENST00000394164 RPLP2P05387 115 aaKnown RBP9.72□□□□□ -0.85
PSEN1-204ENST00000394164 LPOP22079 712 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-204ENST00000394164 MASP1P48740 699 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 TPRG1LQ5T0D9 272 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 PRMT9Q6P2P2 845 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 NPAS4Q8IUM7 802 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 UBE2J2Q8N2K1 259 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 PHF10Q8WUB8 498 aaKnown RBP9.72□□□□□ -0.85
PSEN1-204ENST00000394164 UBE2FQ969M7 185 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 MTFMTQ96DP5 389 aaKnown RBP9.72□□□□□ -0.85
PSEN1-204ENST00000394164 ZNF300Q96RE9 604 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-204ENST00000394164 MGME1Q9BQP7 344 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 MAGEH1Q9H213 219 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 CCDC177Q9NQR7 707 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-204ENST00000394164 AFF4Q9UHB7 1163 aaKnown RBP9.72□□□□□ -0.85
PSEN1-204ENST00000394164 SNX8Q9Y5X2 465 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 XIRP2A4UGR9 3374 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 SCN5AQ14524 2016 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 ASPDHA6ND91 283 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 ST13P50502 369 aaKnown RBP9.72□□□□□ -0.85
PSEN1-204ENST00000394164 CDH4P55283 916 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 KCNK10P57789 538 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 SNRPD2P62316 118 aaKnown RBP9.72□□□□□ -0.85
PSEN1-204ENST00000394164 ZXDBP98169 803 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 CHRNB3Q05901 458 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 ZNF404Q494X3 552 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 BCL7AQ4VC05 210 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 PXDC1Q5TGL8 231 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 ANKS6Q68DC2 871 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 LAIR1Q6GTX8 287 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 SULT1C3Q6IMI6 304 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 NEK10Q6ZWH5 1172 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 ZNF438Q7Z4V0 828 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 TMEM179BQ7Z7N9 219 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 ZNF540Q8NDQ6 660 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 CCDC120Q96HB5 630 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 TBCDQ9BTW9 1192 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 RUBCNLQ9H714 662 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 NLE1Q9NVX2 485 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-204ENST00000394164 ZNF225Q9UK10 706 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 CLEC4EQ9ULY5 219 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 WBP11Q9Y2W2 641 aaKnown RBP9.72□□□□□ -0.85
PSEN1-204ENST00000394164 PCDHGA10Q9Y5H3 936 aa9.72□□□□□ -0.85
PSEN1-204ENST00000394164 MYOFQ9NZM1 2061 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 USP34Q70CQ2 3546 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 A0A0G2JMP0 313 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 AGAP5A6NIR3 686 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 KDELR3O43731 214 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 VPS26AO75436 327 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 APOA1P02647 267 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 CYBBP04839 570 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 PKMP14618 531 aaKnown RBP9.71□□□□□ -0.85
PSEN1-204ENST00000394164 AZGP1P25311 298 aaKnown RBP9.71□□□□□ -0.85
PSEN1-204ENST00000394164 HTR6P50406 440 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 CYP4F8P98187 520 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 CD83Q01151 205 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 RING1Q06587 406 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 CDK5R2Q13319 367 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 TP53BP2Q13625 1128 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 CDH18Q13634 790 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 SLC14A2Q15849 920 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 CRY1Q16526 586 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 CTSL3PQ5NE16 218 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 CES5AQ6NT32 575 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 ERAP2Q6P179 960 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 MBOAT1Q6ZNC8 495 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 GPSM1Q86YR5 675 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 APCDD1Q8J025 514 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 DTWD1Q8N5C7 304 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 FNDC5Q8NAU1 212 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms