RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.24□□□□□ -0.616e-7■■■■□ 26.5
SOD1-202ENST00000389995 ODF2Q5BJF6 829 aa11.24□□□□□ -0.61
SOD1-202ENST00000389995 WASHC2DQ5SRD0 308 aa11.24□□□□□ -0.61
SOD1-202ENST00000389995 FCRLBQ6BAA4 426 aa11.24□□□□□ -0.61
SOD1-202ENST00000389995 FRMPD2BQ6IN97 320 aa11.24□□□□□ -0.61
SOD1-202ENST00000389995 RANBP10Q6VN20 620 aa11.24□□□□□ -0.61
SOD1-202ENST00000389995 NEK10Q6ZWH5 1172 aa11.24□□□□□ -0.61
SOD1-202ENST00000389995 H2AFVQ71UI9 128 aa11.24□□□□□ -0.61
SOD1-202ENST00000389995 TTC29Q8NA56 475 aaPredicted RBP11.24□□□□□ -0.61
SOD1-202ENST00000389995 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.24□□□□□ -0.61
SOD1-202ENST00000389995 SLC35G2Q8TBE7 412 aa11.24□□□□□ -0.61
SOD1-202ENST00000389995 IQCDQ96DY2 449 aa11.24□□□□□ -0.61
SOD1-202ENST00000389995 VPS50Q96JG6 964 aa11.24□□□□□ -0.61
SOD1-202ENST00000389995 MAGED4Q96JG8 741 aa11.24□□□□□ -0.61
SOD1-202ENST00000389995 SPOCK3Q9BQ16 436 aa11.24□□□□□ -0.61
SOD1-202ENST00000389995 TMUB1Q9BVT8 246 aa11.24□□□□□ -0.61
SOD1-202ENST00000389995 YIPF2Q9BWQ6 316 aa11.24□□□□□ -0.61
SOD1-202ENST00000389995 ENKD1Q9H0I2 346 aa11.24□□□□□ -0.61
SOD1-202ENST00000389995 TSPY26PQ9H489 355 aa11.24□□□□□ -0.61
SOD1-202ENST00000389995 IMPACTQ9P2X3 320 aa11.24□□□□□ -0.61
SOD1-202ENST00000389995 ZNF282Q9UDV7 671 aaPredicted RBP11.24□□□□□ -0.61
SOD1-202ENST00000389995 ZC3H7BQ9UGR2 993 aaKnown RBP11.24□□□□□ -0.61
SOD1-202ENST00000389995 POLG2Q9UHN1 485 aa11.24□□□□□ -0.61
SOD1-202ENST00000389995 PHF3Q92576 2039 aaKnown RBP11.24□□□□□ -0.61
SOD1-202ENST00000389995 RTTNQ86VV8 2226 aa11.24□□□□□ -0.61
SOD1-202ENST00000389995 LOC105369274A0A096LPK9 316 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 IGHV1-45A0A0A0MS14 117 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 TRBV5-4A0A0C4DH59 114 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 LOC102723532A0A0G2JNH3 316 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 KRT87PA6NCN2 255 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 OR5H15A6NDH6 313 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 NPIPA5E9PKD4 350 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 LIN7AO14910 233 aaPredicted RBP11.23□□□□□ -0.61
SOD1-202ENST00000389995 BMP10O95393 424 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 CRTAMO95727 393 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 AP2A1O95782 977 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 EIF2S1P05198 315 aaKnown RBP11.23□□□□□ -0.61
SOD1-202ENST00000389995 PSMB4P28070 264 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 PSMB5P28074 263 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 NR2C2P49116 596 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 EFNA3P52797 238 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 EMP2P54851 167 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 GEMP55040 296 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 ZBED6P86452 979 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 SF1Q15637 639 aaKnown RBP11.23□□□□□ -0.61
SOD1-202ENST00000389995 SYTL3Q4VX76 610 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 ZNF766Q5HY98 468 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 VSIG1Q86XK7 387 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 SPPL2CQ8IUH8 684 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 VRK3Q8IV63 474 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 OR4N4Q8N0Y3 316 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 CFAP61Q8NHU2 1237 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 SUN3Q8TAQ9 357 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 DENND1AQ8TEH3 1009 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 HEXDCQ8WVB3 486 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 SYN2Q92777 582 aaPredicted RBP11.23□□□□□ -0.61
SOD1-202ENST00000389995 P3H4Q92791 437 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 QKIQ96PU8 341 aaKnown RBP eCLIP11.23□□□□□ -0.61
SOD1-202ENST00000389995 MENTQ9BUN1 341 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 GBA3Q9H227 469 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 GSX1Q9H4S2 264 aaPredicted RBP11.23□□□□□ -0.61
SOD1-202ENST00000389995 KLHL1Q9NR64 748 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 ANKRD10Q9NXR5 420 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 STMN3Q9NZ72 180 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 NPIPA1Q9UND3 350 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 ZNF835Q9Y2P0 537 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 LUC7L2Q9Y383 392 aaKnown RBP11.23□□□□□ -0.61
SOD1-202ENST00000389995 JMJD1CQ15652 2540 aa11.23□□□□□ -0.61
SOD1-202ENST00000389995 A0A0J9YVX5 310 aa11.22□□□□□ -0.61
SOD1-202ENST00000389995 SLC5A10A0PJK1 596 aa11.22□□□□□ -0.61
SOD1-202ENST00000389995 FITM1A5D6W6 292 aa11.22□□□□□ -0.61
SOD1-202ENST00000389995 OR51F1A6NGY5 319 aa11.22□□□□□ -0.61
SOD1-202ENST00000389995 A8MUI8 341 aa11.22□□□□□ -0.61
SOD1-202ENST00000389995 IDSB3KWA1 339 aa11.22□□□□□ -0.61
SOD1-202ENST00000389995 CBFA2T2O43439 604 aa11.22□□□□□ -0.61
SOD1-202ENST00000389995 TPH1P17752 444 aa11.22□□□□□ -0.61
SOD1-202ENST00000389995 CD9P21926 228 aa11.22□□□□□ -0.61
SOD1-202ENST00000389995 FBLP22087 321 aaKnown RBP11.22□□□□□ -0.61
SOD1-202ENST00000389995 RBL1P28749 1068 aa11.22□□□□□ -0.61
SOD1-202ENST00000389995 YBX1P67809 324 aaKnown RBP11.22□□□□□ -0.61
SOD1-202ENST00000389995 GRB7Q14451 532 aa11.22□□□□□ -0.61
SOD1-202ENST00000389995 PCOLCEQ15113 449 aa11.22□□□□□ -0.61
SOD1-202ENST00000389995 FAM214AQ32MH5 1076 aa11.22□□□□□ -0.61
SOD1-202ENST00000389995 GPR33Q49SQ1 333 aa11.22□□□□□ -0.61
SOD1-202ENST00000389995 ZC3H12BQ5HYM0 836 aaKnown RBP11.22□□□□□ -0.61
SOD1-202ENST00000389995 TCTE1Q5JU00 501 aa11.22□□□□□ -0.61
SOD1-202ENST00000389995 ABHD17BQ5VST6 288 aa11.22□□□□□ -0.61
SOD1-202ENST00000389995 DENND5AQ6IQ26 1287 aa11.22□□□□□ -0.61
SOD1-202ENST00000389995 EML6Q6ZMW3 1958 aa11.22□□□□□ -0.61
SOD1-202ENST00000389995 SHISA5Q8N114 240 aa11.22□□□□□ -0.61
SOD1-202ENST00000389995 ACBD4Q8NC06 268 aa11.22□□□□□ -0.61
SOD1-202ENST00000389995 AGAP11Q8TF27 550 aa11.22□□□□□ -0.61
SOD1-202ENST00000389995 SDCCAG3Q96C92 435 aa11.22□□□□□ -0.61
SOD1-202ENST00000389995 GPR137Q96N19 417 aa11.22□□□□□ -0.61
SOD1-202ENST00000389995 ZNF285Q96NJ3 590 aa11.22□□□□□ -0.61
SOD1-202ENST00000389995 SIGLEC12Q96PQ1 595 aa11.22□□□□□ -0.61
SOD1-202ENST00000389995 GPAMQ9HCL2 828 aa11.22□□□□□ -0.61
SOD1-202ENST00000389995 PIH1D1Q9NWS0 290 aaKnown RBP11.22□□□□□ -0.61
SOD1-202ENST00000389995 CAPN11Q9UMQ6 739 aa11.22□□□□□ -0.61
SOD1-202ENST00000389995 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.22□□□□□ -0.612e-12■■□□□ 14.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms