RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 RNF215Q9Y6U7 377 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 WDR81Q562E7 1941 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 METTL18O95568 372 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 SNAP29O95721 258 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 IFNA17P01571 189 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 SLC2A2P11168 524 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-203ENST00000381196 ERVK-21P61565 698 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 HERVK_113P63132 956 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 PGM5Q15124 567 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 KLHL26Q53HC5 615 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 ZNF470Q6ECI4 717 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 NEPROQ6NW34 567 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 FAM124AQ86V42 546 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 RALGPS2Q86X27 583 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-203ENST00000381196 ZSWIM2Q8NEG5 633 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 SLC38A4Q969I6 547 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 ATXN7L3BQ96GX2 97 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 ERVK-6Q9BXR3 956 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 ISYNA1Q9NPH2 558 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 ARL8BQ9NVJ2 186 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 LYARQ9NX58 379 aaKnown RBP4.78□□□□□ -1.64
PTPRD-203ENST00000381196 COL20A1Q9P218 1284 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 HCN4Q9Y3Q4 1203 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 ZNF175Q9Y473 711 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 SCN3AQ9NY46 2000 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 C17orf113A0A1B0GUU1 675 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 CDK4P11802 303 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 MATN1P21941 496 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 SCNN1BP51168 640 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 SCNN1GP51170 649 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 SLC12A3P55017 1021 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 ACTBP60709 375 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 RAB8AP61006 207 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 POLR2LP62875 67 aaKnown RBP4.78□□□□□ -1.64
PTPRD-203ENST00000381196 ACTG1P63261 375 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 ALDH6A1Q02252 535 aaKnown RBP4.78□□□□□ -1.64
PTPRD-203ENST00000381196 ZNF211Q13398 564 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-203ENST00000381196 RSU1Q15404 277 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 TGFBIQ15582 683 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 DACT2Q5SW24 774 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 GPRIN3Q6ZVF9 776 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 AMIGO2Q86SJ2 522 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 CAND1Q86VP6 1230 aaKnown RBP4.78□□□□□ -1.64
PTPRD-203ENST00000381196 PDZD9Q8IXQ8 264 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 CYP2W1Q8TAV3 490 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 PGLYRP2Q96PD5 576 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 GPR20Q99678 358 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 THUMPD3Q9BV44 507 aaKnown RBP4.78□□□□□ -1.64
PTPRD-203ENST00000381196 C2orf49Q9BVC5 232 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-203ENST00000381196 DPY30Q9C005 99 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 SDCBP2Q9H190 292 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 MEPEQ9NQ76 525 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-203ENST00000381196 KLK4Q9Y5K2 254 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 INMTO95050 263 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 NFATC1O95644 943 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 EGFP01133 1207 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 IL1AP01583 271 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 C9P02748 559 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 ALPPL2P10696 532 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 JUPP14923 745 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 HTR1EP28566 365 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 FEN1P39748 380 aaKnown RBP4.78□□□□□ -1.64
PTPRD-203ENST00000381196 CREB5Q02930 508 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 TCEA2Q15560 299 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 BAK1Q16611 211 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 ZNF57Q68EA5 555 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-203ENST00000381196 TPGS1Q6ZTW0 290 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 TCTE3Q8IZS6 198 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 CBR4Q8N4T8 237 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 TSTD1Q8NFU3 115 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 NTAN1Q96AB6 310 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 ZNF599Q96NL3 588 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 ELOVL6Q9H5J4 265 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 CAPN8A6NHC0 703 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 NT5C1B-RDH14C9J2C7 533 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 SLC2A4P14672 509 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 TAP2Q03519 686 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 IRF5Q13568 498 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 NOMO1Q15155 1222 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 TBC1D25Q3MII6 688 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 SETMARQ53H47 684 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-203ENST00000381196 ULK3Q6PHR2 472 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 OTOP2Q7RTS6 562 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 TPRA1Q86W33 373 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 EPHX4Q8IUS5 362 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 HJURPQ8NCD3 748 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-203ENST00000381196 GRIN3AQ8TCU5 1115 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 NSMAFQ92636 917 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 TFAP2CQ92754 450 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 ELF4Q99607 663 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-203ENST00000381196 REEP4Q9H6H4 257 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 ZDHHC6Q9H6R6 413 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 CLDND1Q9NY35 253 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 FKBP7Q9Y680 259 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 PDCD11Q14690 1871 aaKnown RBP4.78□□□□□ -1.64
PTPRD-203ENST00000381196 FER1L6Q2WGJ9 1857 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 TTC3P53804 2025 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 TPP1O14773 563 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 CPNE6O95741 557 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 ATF4P18848 351 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms