RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 ACOT13Q9NPJ3 140 aa13.41□□□□□ -0.26
MCF2L-204ENST00000375608 GBAP04062 536 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 RPLP0P05388 317 aaKnown RBP13.4□□□□□ -0.26
MCF2L-204ENST00000375608 CKMT1AP12532 417 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 SPNP16150 400 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 TACR1P25103 407 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 CCL23P55773 120 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 SERINC3Q13530 473 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 NFE2Q16621 373 aaPredicted RBP13.4□□□□□ -0.26
MCF2L-204ENST00000375608 TSTQ16762 297 aaKnown RBP13.4□□□□□ -0.26
MCF2L-204ENST00000375608 COQ5Q5HYK3 327 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 TYW3Q6IPR3 259 aaKnown RBP13.4□□□□□ -0.26
MCF2L-204ENST00000375608 KLHDC9Q8NEP7 349 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 NECTIN4Q96NY8 510 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 RAD18Q9NS91 495 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 MOSPD1Q9UJG1 213 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 PPP2R3BQ9Y5P8 575 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 NRXN2Q9P2S2 1712 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 FAM47E-STBD1D6RA91 191 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 E2F3O00716 465 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 UPK1BO75841 260 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 ANXA5P08758 320 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 JUNBP17275 347 aaPredicted RBP13.4□□□□□ -0.26
MCF2L-204ENST00000375608 DGKAP23743 735 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 LIPAP38571 399 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 RPL34P49207 117 aaKnown RBP13.4□□□□□ -0.26
MCF2L-204ENST00000375608 RPIAP49247 311 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 RAB41Q5JT25 222 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 KIAA1614Q5VZ46 1190 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 RGMBQ6NW40 437 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 GALNT12Q8IXK2 581 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 UMODL1-AS1Q8N2C9 162 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 SLC38A4Q969I6 547 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 COPS8Q99627 209 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 NECTIN3Q9NQS3 549 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 SLC6A13Q9NSD5 602 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 VNN3Q9NY84 501 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 NUDT4Q9NZJ9 180 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 RPS6KA6Q9UK32 745 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 RAB23Q9ULC3 237 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 DLGAP4Q9Y2H0 992 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 NOX1Q9Y5S8 564 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 UPK1AO00322 258 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 STX16O14662 325 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 CPNE3O75131 537 aaKnown RBP13.4□□□□□ -0.26
MCF2L-204ENST00000375608 MTX2O75431 263 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 PBLDP30039 288 aaPredicted RBP13.4□□□□□ -0.26
MCF2L-204ENST00000375608 PPP2R2BQ00005 443 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 CAMK2GQ13555 558 aaPredicted RBP13.4□□□□□ -0.26
MCF2L-204ENST00000375608 ZNF792Q3KQV3 632 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 DGKKQ5KSL6 1271 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 C8orf82Q6P1X6 216 aaPredicted RBP13.4□□□□□ -0.26
MCF2L-204ENST00000375608 NEK5Q6P3R8 708 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 VPS37AQ8NEZ2 397 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 CD200R1Q8TD46 325 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 OMA1Q96E52 524 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 CDK5RAP1Q96SZ6 601 aaKnown RBP13.4□□□□□ -0.26
MCF2L-204ENST00000375608 ARNT2Q9HBZ2 717 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 PRDM5Q9NQX1 630 aaPredicted RBP13.4□□□□□ -0.26
MCF2L-204ENST00000375608 ADARB2Q9NS39 739 aaKnown RBP13.4□□□□□ -0.26
MCF2L-204ENST00000375608 TLR6Q9Y2C9 796 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 PRKAB1Q9Y478 270 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 TRPV2Q9Y5S1 764 aa13.4□□□□□ -0.26
MCF2L-204ENST00000375608 MROH6A6NGR9 719 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 SAGE2PA6NJ88 616 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 FZD9O00144 591 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 MMP2P08253 660 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 DNAJA1P31689 397 aaKnown RBP13.39□□□□□ -0.27
MCF2L-204ENST00000375608 DAPP51397 102 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 ST3GAL4Q11206 333 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 CDH18Q13634 790 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 TTLL9Q3SXZ7 439 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 PARP15Q460N3 678 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 SPOUT1Q5T280 376 aaKnown RBP13.39□□□□□ -0.27
MCF2L-204ENST00000375608 FAM131AQ6UXB0 335 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 EIF3MQ7L2H7 374 aaKnown RBP13.39□□□□□ -0.27
MCF2L-204ENST00000375608 RIMKLAQ8IXN7 391 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 CLECL1Q8IZS7 167 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 OR8J3Q8NGG0 315 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 VANGL1Q8TAA9 524 aaPredicted RBP13.39□□□□□ -0.27
MCF2L-204ENST00000375608 C11orf16Q9NQ32 467 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 ANKRD66B4E2M5 251 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 DYRK3O43781 588 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 APOL3O95236 402 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 CLDN9O95484 217 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 RPL9P32969 192 aaKnown RBP13.39□□□□□ -0.27
MCF2L-204ENST00000375608 NPRL3Q12980 569 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 TUSC3Q13454 348 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 NDUFA5Q16718 116 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 UPP1Q16831 310 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 SUSD1Q6UWL2 747 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 PTCHD4Q6ZW05 846 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 GPC2Q8N158 579 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 DEPDC4Q8N2C3 294 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 METTL4Q8N3J2 472 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 ENKURQ8TC29 256 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 TCF25Q9BQ70 676 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 AKIP1Q9NQ31 210 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 DCAF13Q9NV06 445 aaKnown RBP13.39□□□□□ -0.27
MCF2L-204ENST00000375608 KLHL3Q9UH77 587 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms