RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 RNASEH2BQ5TBB1 312 aaKnown RBP18.45■□□□□ 0.54
TRAPPC3-204ENST00000373166 C1orf189Q5VU69 101 aa18.45■□□□□ 0.54
TRAPPC3-204ENST00000373166 RHBDD2Q6NTF9 364 aa18.45■□□□□ 0.54
TRAPPC3-204ENST00000373166 PCGF5Q86SE9 256 aa18.45■□□□□ 0.54
TRAPPC3-204ENST00000373166 KCNMB4Q86W47 210 aa18.45■□□□□ 0.54
TRAPPC3-204ENST00000373166 CREG2Q8IUH2 290 aa18.45■□□□□ 0.54
TRAPPC3-204ENST00000373166 KLHL7Q8IXQ5 586 aa18.45■□□□□ 0.54
TRAPPC3-204ENST00000373166 SLC22A15Q8IZD6 547 aa18.45■□□□□ 0.54
TRAPPC3-204ENST00000373166 KRT222Q8N1A0 295 aa18.45■□□□□ 0.54
TRAPPC3-204ENST00000373166 OR5AR1Q8NGP9 310 aa18.45■□□□□ 0.54
TRAPPC3-204ENST00000373166 GSDMBQ8TAX9 411 aa18.45■□□□□ 0.54
TRAPPC3-204ENST00000373166 PROKR1Q8TCW9 393 aa18.45■□□□□ 0.54
TRAPPC3-204ENST00000373166 TCF12Q99081 682 aa18.45■□□□□ 0.54
TRAPPC3-204ENST00000373166 P2RY12Q9H244 342 aa18.45■□□□□ 0.54
TRAPPC3-204ENST00000373166 ZBTB20Q9HC78 741 aaPredicted RBP18.45■□□□□ 0.54
TRAPPC3-204ENST00000373166 ACTR10Q9NZ32 417 aa18.45■□□□□ 0.54
TRAPPC3-204ENST00000373166 POLG2Q9UHN1 485 aa18.45■□□□□ 0.54
TRAPPC3-204ENST00000373166 SRPK3Q9UPE1 567 aa18.45■□□□□ 0.54
TRAPPC3-204ENST00000373166 MAD1L1Q9Y6D9 718 aa18.45■□□□□ 0.54
TRAPPC3-204ENST00000373166 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.45■□□□□ 0.54
TRAPPC3-204ENST00000373166 PCSK5Q92824 1860 aa18.44■□□□□ 0.54
TRAPPC3-204ENST00000373166 ARHGAP10A1A4S6 786 aa18.44■□□□□ 0.54
TRAPPC3-204ENST00000373166 IQCF5A8MTL0 148 aa18.44■□□□□ 0.54
TRAPPC3-204ENST00000373166 BHMG1C9JSJ3 638 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC3-204ENST00000373166 GOLGA8KD6RF30 607 aa18.44■□□□□ 0.54
TRAPPC3-204ENST00000373166 GOLGA8TH3BQL2 631 aa18.44■□□□□ 0.54
TRAPPC3-204ENST00000373166 DNALI1O14645 258 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC3-204ENST00000373166 ATXN8OSP0DMR3 200 aa18.44■□□□□ 0.54
TRAPPC3-204ENST00000373166 POU3F2P20265 443 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC3-204ENST00000373166 ACADLP28330 430 aa18.44■□□□□ 0.54
TRAPPC3-204ENST00000373166 SHMT2P34897 504 aa18.44■□□□□ 0.54
TRAPPC3-204ENST00000373166 MAGEA3P43357 314 aa18.44■□□□□ 0.54
TRAPPC3-204ENST00000373166 ANKRD20A4Q4UJ75 823 aa18.44■□□□□ 0.54
TRAPPC3-204ENST00000373166 DNAJC21Q5F1R6 531 aaKnown RBP18.44■□□□□ 0.54
TRAPPC3-204ENST00000373166 SYDE1Q6ZW31 735 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC3-204ENST00000373166 TBC1D21Q8IYX1 336 aa18.44■□□□□ 0.54
TRAPPC3-204ENST00000373166 OR5K2Q8NHB8 316 aa18.44■□□□□ 0.54
TRAPPC3-204ENST00000373166 GBP5Q96PP8 586 aa18.44■□□□□ 0.54
TRAPPC3-204ENST00000373166 WDR77Q9BQA1 342 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC3-204ENST00000373166 TRIM56Q9BRZ2 755 aaKnown RBP18.44■□□□□ 0.54
TRAPPC3-204ENST00000373166 OSGIN2Q9Y236 505 aa18.44■□□□□ 0.54
TRAPPC3-204ENST00000373166 VPS9D1Q9Y2B5 631 aa18.44■□□□□ 0.54
TRAPPC3-204ENST00000373166 H3BMM5 538 aa18.43■□□□□ 0.54
TRAPPC3-204ENST00000373166 CCDC188H7C350 402 aa18.43■□□□□ 0.54
TRAPPC3-204ENST00000373166 KPNA5O15131 536 aa18.43■□□□□ 0.54
TRAPPC3-204ENST00000373166 RPN2P04844 631 aa18.43■□□□□ 0.54
TRAPPC3-204ENST00000373166 AOAHP28039 575 aa18.43■□□□□ 0.54
TRAPPC3-204ENST00000373166 DR1Q01658 176 aa18.43■□□□□ 0.54
TRAPPC3-204ENST00000373166 AIMP2Q13155 320 aaKnown RBP18.43■□□□□ 0.54
TRAPPC3-204ENST00000373166 THOC5Q13769 683 aaKnown RBP18.43■□□□□ 0.54
TRAPPC3-204ENST00000373166 ZRSR2Q15696 482 aaKnown RBP18.43■□□□□ 0.54
TRAPPC3-204ENST00000373166 SP5Q6BEB4 398 aaPredicted RBP18.43■□□□□ 0.54
TRAPPC3-204ENST00000373166 ZNF470Q6ECI4 717 aa18.43■□□□□ 0.54
TRAPPC3-204ENST00000373166 NEPROQ6NW34 567 aa18.43■□□□□ 0.54
TRAPPC3-204ENST00000373166 SPESP1Q6UW49 350 aa18.43■□□□□ 0.54
TRAPPC3-204ENST00000373166 PPP1R32Q7Z5V6 425 aa18.43■□□□□ 0.54
TRAPPC3-204ENST00000373166 ADGRF3Q8IZF5 1079 aa18.43■□□□□ 0.54
TRAPPC3-204ENST00000373166 C19orf47Q8N9M1 422 aaKnown RBP18.43■□□□□ 0.54
TRAPPC3-204ENST00000373166 LPGAT1Q92604 370 aa18.43■□□□□ 0.54
TRAPPC3-204ENST00000373166 NACC2Q96BF6 587 aa18.43■□□□□ 0.54
TRAPPC3-204ENST00000373166 XKR8Q9H6D3 395 aa18.43■□□□□ 0.54
TRAPPC3-204ENST00000373166 RUBCNLQ9H714 662 aa18.43■□□□□ 0.54
TRAPPC3-204ENST00000373166 FAM60AQ9NP50 221 aa18.43■□□□□ 0.54
TRAPPC3-204ENST00000373166 TXLNGQ9NUQ3 528 aa18.43■□□□□ 0.54
TRAPPC3-204ENST00000373166 RNF14Q9UBS8 474 aa18.43■□□□□ 0.54
TRAPPC3-204ENST00000373166 ICKQ9UPZ9 632 aa18.43■□□□□ 0.54
TRAPPC3-204ENST00000373166 CDYLQ9Y232 598 aa18.43■□□□□ 0.54
TRAPPC3-204ENST00000373166 TDRKHQ9Y2W6 561 aaKnown RBP18.43■□□□□ 0.54
TRAPPC3-204ENST00000373166 OTOGQ6ZRI0 2925 aa18.43■□□□□ 0.54
TRAPPC3-204ENST00000373166 AGPSO00116 658 aa18.42■□□□□ 0.54
TRAPPC3-204ENST00000373166 MASP2O00187 686 aa18.42■□□□□ 0.54
TRAPPC3-204ENST00000373166 GPC4O75487 556 aa18.42■□□□□ 0.54
TRAPPC3-204ENST00000373166 USP1O94782 785 aa18.42■□□□□ 0.54
TRAPPC3-204ENST00000373166 ESR1P03372 595 aa18.42■□□□□ 0.54
TRAPPC3-204ENST00000373166 PRF1P14222 555 aa18.42■□□□□ 0.54
TRAPPC3-204ENST00000373166 ITGA3P26006 1051 aa18.42■□□□□ 0.54
TRAPPC3-204ENST00000373166 NKAIN1Q4KMZ8 207 aa18.42■□□□□ 0.54
TRAPPC3-204ENST00000373166 UNC5DQ6UXZ4 953 aa18.42■□□□□ 0.54
TRAPPC3-204ENST00000373166 OTOAQ7RTW8 1153 aa18.42■□□□□ 0.54
TRAPPC3-204ENST00000373166 CILP2Q8IUL8 1156 aa18.42■□□□□ 0.54
TRAPPC3-204ENST00000373166 PPP4R1Q8TF05 950 aa18.42■□□□□ 0.54
TRAPPC3-204ENST00000373166 NRTNQ99748 197 aa18.42■□□□□ 0.54
TRAPPC3-204ENST00000373166 SPRTNQ9H040 489 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC3-204ENST00000373166 INTS10Q9NVR2 710 aaKnown RBP18.42■□□□□ 0.54
TRAPPC3-204ENST00000373166 NOVA2Q9UNW9 492 aaKnown RBP18.42■□□□□ 0.54
TRAPPC3-204ENST00000373166 H3BMH7 237 aa18.41■□□□□ 0.54
TRAPPC3-204ENST00000373166 ZSCAN9O15535 394 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC3-204ENST00000373166 EDN3P14138 238 aa18.41■□□□□ 0.54
TRAPPC3-204ENST00000373166 FMO4P31512 558 aa18.41■□□□□ 0.54
TRAPPC3-204ENST00000373166 ADARP55265 1226 aaKnown RBP18.41■□□□□ 0.54
TRAPPC3-204ENST00000373166 RIPPLY3P57055 190 aa18.41■□□□□ 0.54
TRAPPC3-204ENST00000373166 SLC9A5Q14940 896 aa18.41■□□□□ 0.54
TRAPPC3-204ENST00000373166 HIF1AQ16665 826 aa18.41■□□□□ 0.54
TRAPPC3-204ENST00000373166 LONRF1Q17RB8 773 aa18.41■□□□□ 0.54
TRAPPC3-204ENST00000373166 CTSL3PQ5NE16 218 aa18.41■□□□□ 0.54
TRAPPC3-204ENST00000373166 MRPL14Q6P1L8 145 aaKnown RBP18.41■□□□□ 0.54
TRAPPC3-204ENST00000373166 VRK3Q8IV63 474 aa18.41■□□□□ 0.54
TRAPPC3-204ENST00000373166 LMNTD2Q8IXW0 634 aa18.41■□□□□ 0.54
TRAPPC3-204ENST00000373166 DNAJB14Q8TBM8 379 aa18.41■□□□□ 0.54
TRAPPC3-204ENST00000373166 GRHL3Q8TE85 626 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms