RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 C12orf66Q96MD2 445 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 NSUN5Q96P11 429 aaKnown RBP5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 TEFMQ96QE5 360 aaKnown RBP5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 GAS2L1Q99501 681 aaPredicted RBP5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 CHID1Q9BWS9 393 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 KLHL25Q9H0H3 589 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 PCDHAC1Q9H158 963 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 FBRSL1Q9HCM7 1045 aaKnown RBP5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 CCNB1IP1Q9NPC3 277 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 CD320Q9NPF0 282 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 DNAJB9Q9UBS3 223 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 ACSL5Q9ULC5 683 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 HS3ST2Q9Y278 367 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 SH3GLB1Q9Y371 365 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 RNF11Q9Y3C5 154 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 A0A1B0GVG6 124 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 GSAPA4D1B5 854 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 TTC34A8MYJ7 566 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 H7C0S8 307 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 OR1F1O43749 312 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 UGT2B11O75310 529 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 RPS17P08708 135 aaKnown RBP5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 HPGDP15428 266 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 GABRB3P28472 473 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 HOXA9P31269 272 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 PRKAG1P54619 331 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 SEC13P55735 322 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 MTPNP58546 118 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 CYP4F2P78329 520 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 PPP1R3AQ16821 1122 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 EIF3MQ7L2H7 374 aaKnown RBP5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 BNIPLQ7Z465 357 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 ZFAND4Q86XD8 727 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 OFCC1Q8IZS5 231 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 MINDY1Q8N5J2 469 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 TRPV3Q8NET8 790 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 SHKBP1Q8TBC3 707 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 PTERQ96BW5 349 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 PRR11Q96HE9 360 aaPredicted RBP5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 EBPLQ9BY08 206 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 FBRSQ9HAH7 460 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 RDH14Q9HBH5 336 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 SCHIP1Q9P0W5 487 aaPredicted RBP5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 RPS6KB2Q9UBS0 482 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 MRPS33Q9Y291 106 aaKnown RBP5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 ACTL7AQ9Y615 435 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 LOC285556D6RIA3 1793 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 ADAMDEC1O15204 470 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 SLC31A1O15431 190 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 BCL10O95999 233 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 FABP3P05413 133 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 THRBP10828 461 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 HLA-EP13747 358 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 EPCAMP16422 314 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 ST13P50502 369 aaKnown RBP5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 PGGT1BP53609 377 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 DIO3P55073 304 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 ABHD18Q0P651 414 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 ZNHIT3Q15649 155 aaPredicted RBP5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 C11orf91Q3C1V1 193 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 ZIK1Q3SY52 487 aaPredicted RBP5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 NADK2Q4G0N4 442 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 C2orf27AQ580R0 203 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 SFT2D3Q587I9 215 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 EOGTQ5NDL2 527 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 OGFOD2Q6N063 350 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 BLOC1S3Q6QNY0 202 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 RSPO2Q6UXX9 243 aaPredicted RBP5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 NEK10Q6ZWH5 1172 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 C16orf62Q7Z3J2 963 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 ANKRD46Q86W74 232 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 NUDT13Q86X67 352 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 PIANPQ8IYJ0 282 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 OR8J3Q8NGG0 315 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 MAPK15Q8TD08 544 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 ZBED6CLQ96FA7 236 aaPredicted RBP5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 AHCYL2Q96HN2 611 aaKnown RBP5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 LRCH3Q96II8 777 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 SLC12A9Q9BXP2 914 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 SYNDIG1Q9H7V2 258 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 TRIM39Q9HCM9 518 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 EXOSC4Q9NPD3 245 aaKnown RBP5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 EXD2Q9NVH0 621 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 THUMPD1Q9NXG2 353 aaKnown RBP5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 FBXL12Q9NXK8 326 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 CLDND1Q9NY35 253 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 GOLGA4Q13439 2230 aaKnown RBP5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 PARP14Q460N5 1801 aa5.18□□□□□ -1.58
SMNDC1-202ENST00000369603 MYO9BQ13459 2157 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 NPIPB15A6NHN6 443 aaPredicted RBP5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 H3BN98 237 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 MUSKO15146 869 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 OR6B1O95007 311 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 KAT7O95251 611 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 APOA1P02647 267 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 SLC35G6P0C7Q6 338 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 CD9P21926 228 aa5.17□□□□□ -1.58
SMNDC1-202ENST00000369603 TIE1P35590 1138 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms