RNA–Protein interactions for RNA: ENST00000366892.5

PRKN-202, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-202ENST00000366892 SPHK1Q9NYA1 384 aa16.34■□□□□ 0.21
PRKN-202ENST00000366892 PLAGL1Q9UM63 463 aa16.34■□□□□ 0.21
PRKN-202ENST00000366892 PCDHGA6Q9Y5G7 932 aa16.34■□□□□ 0.21
PRKN-202ENST00000366892 TEX264Q9Y6I9 313 aa16.34■□□□□ 0.21
PRKN-202ENST00000366892 MAP3K7O43318 606 aa16.33■□□□□ 0.2
PRKN-202ENST00000366892 CPNE3O75131 537 aaKnown RBP16.33■□□□□ 0.2
PRKN-202ENST00000366892 SLCO2B1O94956 709 aa16.33■□□□□ 0.2
PRKN-202ENST00000366892 ZWINTO95229 277 aa16.33■□□□□ 0.2
PRKN-202ENST00000366892 APOA4P06727 396 aa16.33■□□□□ 0.2
PRKN-202ENST00000366892 CHRM5P08912 532 aaPredicted RBP16.33■□□□□ 0.2
PRKN-202ENST00000366892 PLA2G2AP14555 144 aa16.33■□□□□ 0.2
PRKN-202ENST00000366892 KRT15P19012 456 aa16.33■□□□□ 0.2
PRKN-202ENST00000366892 RPS3P23396 243 aaKnown RBP eCLIP16.33■□□□□ 0.24e-6■■■■■ 40.4
PRKN-202ENST00000366892 GCAP28676 217 aa16.33■□□□□ 0.2
PRKN-202ENST00000366892 MSH2P43246 934 aa16.33■□□□□ 0.2
PRKN-202ENST00000366892 POLE2P56282 527 aa16.33■□□□□ 0.2
PRKN-202ENST00000366892 GPX6P59796 221 aa16.33■□□□□ 0.2
PRKN-202ENST00000366892 NFATC3Q12968 1075 aa16.33■□□□□ 0.2
PRKN-202ENST00000366892 DNASE1L3Q13609 305 aa16.33■□□□□ 0.2
PRKN-202ENST00000366892 ERV3-1Q14264 604 aa16.33■□□□□ 0.2
PRKN-202ENST00000366892 FASTKD3Q14CZ7 662 aaKnown RBP16.33■□□□□ 0.2
PRKN-202ENST00000366892 DEFB109BQ30KR1 87 aa16.33■□□□□ 0.2
PRKN-202ENST00000366892 CYS1Q717R9 158 aa16.33■□□□□ 0.2
PRKN-202ENST00000366892 PIGWQ7Z7B1 504 aa16.33■□□□□ 0.2
PRKN-202ENST00000366892 SDCCAG8Q86SQ7 713 aaPredicted RBP16.33■□□□□ 0.2
PRKN-202ENST00000366892 OR1L3Q8NH93 324 aa16.33■□□□□ 0.2
PRKN-202ENST00000366892 CFAP61Q8NHU2 1237 aa16.33■□□□□ 0.2
PRKN-202ENST00000366892 FLVCR1-AS1Q8TAF5 88 aa16.33■□□□□ 0.2
PRKN-202ENST00000366892 OR2A14Q96R47 310 aa16.33■□□□□ 0.2
PRKN-202ENST00000366892 TWSG1Q9GZX9 223 aa16.33■□□□□ 0.2
PRKN-202ENST00000366892 FANCEQ9HB96 536 aa16.33■□□□□ 0.2
PRKN-202ENST00000366892 LATS2Q9NRM7 1088 aa16.33■□□□□ 0.2
PRKN-202ENST00000366892 CTNNAL1Q9UBT7 734 aa16.33■□□□□ 0.2
PRKN-202ENST00000366892 IKBKGQ9Y6K9 419 aa16.33■□□□□ 0.2
PRKN-202ENST00000366892 SPTBP11277 2137 aa16.32■□□□□ 0.2
PRKN-202ENST00000366892 C21orf140B9A014 251 aa16.32■□□□□ 0.2
PRKN-202ENST00000366892 POC1B-GALNT4F8VUJ3 575 aa16.32■□□□□ 0.2
PRKN-202ENST00000366892 TM9SF1O15321 606 aa16.32■□□□□ 0.2
PRKN-202ENST00000366892 UGT2B7P16662 529 aa16.32■□□□□ 0.2
PRKN-202ENST00000366892 ZNF789Q5FWF6 425 aa16.32■□□□□ 0.2
PRKN-202ENST00000366892 LGSNQ5TDP6 509 aa16.32■□□□□ 0.2
PRKN-202ENST00000366892 ARMC3Q5W041 872 aa16.32■□□□□ 0.2
PRKN-202ENST00000366892 MRNIPQ6NTE8 343 aa16.32■□□□□ 0.2
PRKN-202ENST00000366892 ZNF517Q6ZMY9 492 aaPredicted RBP16.32■□□□□ 0.2
PRKN-202ENST00000366892 CDHR3Q6ZTQ4 885 aa16.32■□□□□ 0.2
PRKN-202ENST00000366892 C3orf62Q6ZUJ4 267 aa16.32■□□□□ 0.2
PRKN-202ENST00000366892 CCDC121Q6ZUS5 278 aa16.32■□□□□ 0.2
PRKN-202ENST00000366892 TRIM73Q86UV7 250 aa16.32■□□□□ 0.2
PRKN-202ENST00000366892 LRRC6Q86X45 466 aa16.32■□□□□ 0.2
PRKN-202ENST00000366892 BIRC8Q96P09 236 aa16.32■□□□□ 0.2
PRKN-202ENST00000366892 PANX3Q96QZ0 392 aa16.32■□□□□ 0.2
PRKN-202ENST00000366892 PAFAH2Q99487 392 aa16.32■□□□□ 0.2
PRKN-202ENST00000366892 NAT9Q9BTE0 207 aa16.32■□□□□ 0.2
PRKN-202ENST00000366892 SLC25A18Q9H1K4 315 aa16.32■□□□□ 0.2
PRKN-202ENST00000366892 ADNPQ9H2P0 1102 aa16.32■□□□□ 0.2
PRKN-202ENST00000366892 FAM60AQ9NP50 221 aa16.32■□□□□ 0.2
PRKN-202ENST00000366892 GNPTGQ9UJJ9 305 aa16.32■□□□□ 0.2
PRKN-202ENST00000366892 ZNF180Q9UJW8 692 aa16.32■□□□□ 0.2
PRKN-202ENST00000366892 MAGEB16A2A368 324 aa16.31■□□□□ 0.2
PRKN-202ENST00000366892 SDR42E2A6NKP2 422 aa16.31■□□□□ 0.2
PRKN-202ENST00000366892 TMEM150CB9EJG8 249 aa16.31■□□□□ 0.2
PRKN-202ENST00000366892 GOLGA8MH3BSY2 632 aa16.31■□□□□ 0.2
PRKN-202ENST00000366892 KDM1AO60341 852 aa16.31■□□□□ 0.2
PRKN-202ENST00000366892 CREG1O75629 220 aa16.31■□□□□ 0.2
PRKN-202ENST00000366892 RECKO95980 971 aa16.31■□□□□ 0.2
PRKN-202ENST00000366892 FURINP09958 794 aa16.31■□□□□ 0.2
PRKN-202ENST00000366892 MAGEA3P43357 314 aa16.31■□□□□ 0.2
PRKN-202ENST00000366892 NAB1Q13506 487 aa16.31■□□□□ 0.2
PRKN-202ENST00000366892 GRB7Q14451 532 aa16.31■□□□□ 0.2
PRKN-202ENST00000366892 TYSND1Q2T9J0 566 aa16.31■□□□□ 0.2
PRKN-202ENST00000366892 CTSL3PQ5NE16 218 aa16.31■□□□□ 0.2
PRKN-202ENST00000366892 KIAA0930Q6ICG6 404 aaPredicted RBP16.31■□□□□ 0.2
PRKN-202ENST00000366892 CASC4Q6P4E1 433 aa16.31■□□□□ 0.2
PRKN-202ENST00000366892 FBF1Q8TES7 1133 aa16.31■□□□□ 0.2
PRKN-202ENST00000366892 APOBEC4Q8WW27 367 aaKnown RBP16.31■□□□□ 0.2
PRKN-202ENST00000366892 LPGAT1Q92604 370 aa16.31■□□□□ 0.2
PRKN-202ENST00000366892 MR1Q95460 341 aa16.31■□□□□ 0.2
PRKN-202ENST00000366892 LRFN5Q96NI6 719 aa16.31■□□□□ 0.2
PRKN-202ENST00000366892 TCF12Q99081 682 aa16.31■□□□□ 0.2
PRKN-202ENST00000366892 TRIM56Q9BRZ2 755 aaKnown RBP16.31■□□□□ 0.2
PRKN-202ENST00000366892 MENTQ9BUN1 341 aa16.31■□□□□ 0.2
PRKN-202ENST00000366892 GPR87Q9BY21 358 aa16.31■□□□□ 0.2
PRKN-202ENST00000366892 SERTAD3Q9UJW9 196 aa16.31■□□□□ 0.2
PRKN-202ENST00000366892 MEN1O00255 615 aa16.3■□□□□ 0.2
PRKN-202ENST00000366892 KPNA5O15131 536 aa16.3■□□□□ 0.2
PRKN-202ENST00000366892 RPN2P04844 631 aa16.3■□□□□ 0.2
PRKN-202ENST00000366892 KLK3P07288 261 aaPredicted RBP16.3■□□□□ 0.2
PRKN-202ENST00000366892 VIMP08670 466 aaKnown RBP16.3■□□□□ 0.2
PRKN-202ENST00000366892 PEBP1P30086 187 aaKnown RBP16.3■□□□□ 0.2
PRKN-202ENST00000366892 FMO4P31512 558 aa16.3■□□□□ 0.2
PRKN-202ENST00000366892 ELK3P41970 407 aa16.3■□□□□ 0.2
PRKN-202ENST00000366892 RAB28P51157 221 aa16.3■□□□□ 0.2
PRKN-202ENST00000366892 KCNAB2Q13303 367 aa16.3■□□□□ 0.2
PRKN-202ENST00000366892 ZIC1Q15915 447 aa16.3■□□□□ 0.2
PRKN-202ENST00000366892 PLEKHS1Q5SXH7 462 aa16.3■□□□□ 0.2
PRKN-202ENST00000366892 NEPROQ6NW34 567 aa16.3■□□□□ 0.2
PRKN-202ENST00000366892 UNC5DQ6UXZ4 953 aa16.3■□□□□ 0.2
PRKN-202ENST00000366892 OTOAQ7RTW8 1153 aa16.3■□□□□ 0.2
PRKN-202ENST00000366892 ANKMY2Q8IV38 441 aa16.3■□□□□ 0.2
PRKN-202ENST00000366892 CYP4X1Q8N118 509 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms