RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 MAGEE2Q8TD90 523 aaPredicted RBP21.98■■□□□ 1.11
LDB1-201ENST00000361198 HCAR2Q8TDS4 363 aa21.98■■□□□ 1.11
LDB1-201ENST00000361198 WFIKKN2Q8TEU8 576 aa21.98■■□□□ 1.11
LDB1-201ENST00000361198 AP2M1Q96CW1 435 aa21.98■■□□□ 1.11
LDB1-201ENST00000361198 NSMCE2Q96MF7 247 aa21.98■■□□□ 1.11
LDB1-201ENST00000361198 WRAP53Q9BUR4 548 aaKnown RBP21.98■■□□□ 1.11
LDB1-201ENST00000361198 EBF1Q9UH73 591 aa21.98■■□□□ 1.11
LDB1-201ENST00000361198 SLC27A6Q9Y2P4 619 aa21.98■■□□□ 1.11
LDB1-201ENST00000361198 TCF20Q9UGU0 1960 aaKnown RBP21.98■■□□□ 1.11
LDB1-201ENST00000361198 NUP210Q8TEM1 1887 aaPredicted RBP21.98■■□□□ 1.11
LDB1-201ENST00000361198 OTOL1A6NHN0 477 aaPredicted RBP21.97■■□□□ 1.11
LDB1-201ENST00000361198 KCNH1O95259 989 aa21.97■■□□□ 1.11
LDB1-201ENST00000361198 CDH1P12830 882 aa21.97■■□□□ 1.11
LDB1-201ENST00000361198 SLC6A11P48066 632 aa21.97■■□□□ 1.11
LDB1-201ENST00000361198 PFN3P60673 137 aa21.97■■□□□ 1.11
LDB1-201ENST00000361198 ABRQ12979 859 aa21.97■■□□□ 1.11
LDB1-201ENST00000361198 ERAP2Q6P179 960 aa21.97■■□□□ 1.11
LDB1-201ENST00000361198 GLB1L3Q8NCI6 653 aaPredicted RBP21.97■■□□□ 1.11
LDB1-201ENST00000361198 ZNF420Q8TAQ5 688 aaPredicted RBP21.97■■□□□ 1.11
LDB1-201ENST00000361198 FOXJ1Q92949 421 aa21.97■■□□□ 1.11
LDB1-201ENST00000361198 VPS35Q96QK1 796 aa21.97■■□□□ 1.11
LDB1-201ENST00000361198 DOK1Q99704 481 aa21.97■■□□□ 1.11
LDB1-201ENST00000361198 CLMPQ9H6B4 373 aa21.97■■□□□ 1.11
LDB1-201ENST00000361198 DNAJC11Q9NVH1 559 aa21.97■■□□□ 1.11
LDB1-201ENST00000361198 SNX6Q9UNH7 406 aa21.97■■□□□ 1.11
LDB1-201ENST00000361198 DLGAP4Q9Y2H0 992 aa21.97■■□□□ 1.11
LDB1-201ENST00000361198 DFNA5O60443 496 aa21.97■■□□□ 1.11
LDB1-201ENST00000361198 SNAP29O95721 258 aa21.97■■□□□ 1.11
LDB1-201ENST00000361198 PGRP06401 933 aa21.97■■□□□ 1.11
LDB1-201ENST00000361198 HLA-EP13747 358 aa21.97■■□□□ 1.11
LDB1-201ENST00000361198 MAPKAPK3Q16644 382 aa21.97■■□□□ 1.11
LDB1-201ENST00000361198 LDLRAP1Q5SW96 308 aa21.97■■□□□ 1.11
LDB1-201ENST00000361198 ETFBKMTQ8IXQ9 262 aa21.97■■□□□ 1.11
LDB1-201ENST00000361198 C12orf43Q96C57 262 aaKnown RBP21.97■■□□□ 1.11
LDB1-201ENST00000361198 SEPHS2Q99611 448 aa21.97■■□□□ 1.11
LDB1-201ENST00000361198 NTN4Q9HB63 628 aa21.97■■□□□ 1.11
LDB1-201ENST00000361198 GALNT8Q9NY28 637 aa21.97■■□□□ 1.11
LDB1-201ENST00000361198 TRANK1O15050 2925 aa21.97■■□□□ 1.11
LDB1-201ENST00000361198 GRXCR1A8MXD5 290 aa21.96■■□□□ 1.11
LDB1-201ENST00000361198 RB1P06400 928 aa21.96■■□□□ 1.11
LDB1-201ENST00000361198 GSTM1P09488 218 aa21.96■■□□□ 1.11
LDB1-201ENST00000361198 PREPP48147 710 aa21.96■■□□□ 1.11
LDB1-201ENST00000361198 GSTM4Q03013 218 aa21.96■■□□□ 1.11
LDB1-201ENST00000361198 TMEM115Q12893 351 aaPredicted RBP21.96■■□□□ 1.11
LDB1-201ENST00000361198 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.96■■□□□ 1.11
LDB1-201ENST00000361198 TBPL2Q6SJ96 375 aa21.96■■□□□ 1.11
LDB1-201ENST00000361198 HOMEZQ8IX15 550 aa21.96■■□□□ 1.11
LDB1-201ENST00000361198 C7orf61Q8IZ16 206 aa21.96■■□□□ 1.11
LDB1-201ENST00000361198 OFCC1Q8IZS5 231 aa21.96■■□□□ 1.11
LDB1-201ENST00000361198 DTWD1Q8N5C7 304 aa21.96■■□□□ 1.11
LDB1-201ENST00000361198 LZICQ8WZA0 190 aa21.96■■□□□ 1.11
LDB1-201ENST00000361198 RNF145Q96MT1 663 aa21.96■■□□□ 1.11
LDB1-201ENST00000361198 CXorf21Q9HAI6 301 aa21.96■■□□□ 1.11
LDB1-201ENST00000361198 DPP7Q9UHL4 492 aa21.96■■□□□ 1.11
LDB1-201ENST00000361198 HEMK1Q9Y5R4 338 aaPredicted RBP21.96■■□□□ 1.11
LDB1-201ENST00000361198 A0A0J9YVX5 310 aa21.96■■□□□ 1.11
LDB1-201ENST00000361198 ARHGEF33A8MVX0 844 aa21.96■■□□□ 1.11
LDB1-201ENST00000361198 UPK1AO00322 258 aa21.96■■□□□ 1.11
LDB1-201ENST00000361198 SPINT1O43278 529 aa21.96■■□□□ 1.11
LDB1-201ENST00000361198 IL6P05231 212 aa21.96■■□□□ 1.11
LDB1-201ENST00000361198 OR8J3Q8NGG0 315 aa21.96■■□□□ 1.11
LDB1-201ENST00000361198 FAM83CQ9BQN1 747 aa21.96■■□□□ 1.11
LDB1-201ENST00000361198 CDC14AQ9UNH5 594 aa21.96■■□□□ 1.11
LDB1-201ENST00000361198 COQ6Q9Y2Z9 468 aa21.96■■□□□ 1.11
LDB1-201ENST00000361198 QSOX1O00391 747 aa21.95■■□□□ 1.1
LDB1-201ENST00000361198 WNT9AO14904 365 aa21.95■■□□□ 1.1
LDB1-201ENST00000361198 AREL1O15033 823 aa21.95■■□□□ 1.1
LDB1-201ENST00000361198 MT-ND1P03886 318 aa21.95■■□□□ 1.1
LDB1-201ENST00000361198 GALNT13Q8IUC8 556 aa21.95■■□□□ 1.1
LDB1-201ENST00000361198 TMEM159Q96B96 161 aa21.95■■□□□ 1.1
LDB1-201ENST00000361198 FBXL8Q96CD0 374 aa21.95■■□□□ 1.1
LDB1-201ENST00000361198 VPS50Q96JG6 964 aa21.95■■□□□ 1.1
LDB1-201ENST00000361198 PCDHGA11Q9Y5H2 935 aa21.95■■□□□ 1.1
LDB1-201ENST00000361198 GMEB1Q9Y692 573 aa21.95■■□□□ 1.1
LDB1-201ENST00000361198 LRRK1Q38SD2 2015 aa21.95■■□□□ 1.1
LDB1-201ENST00000361198 H0Y858 1186 aa21.95■■□□□ 1.1
LDB1-201ENST00000361198 ATG13O75143 517 aa21.95■■□□□ 1.1
LDB1-201ENST00000361198 PSIP1O75475 530 aaKnown RBP21.95■■□□□ 1.1
LDB1-201ENST00000361198 POU2F2P09086 479 aa21.95■■□□□ 1.1
LDB1-201ENST00000361198 DCKP27707 260 aa21.95■■□□□ 1.1
LDB1-201ENST00000361198 HALP42357 657 aa21.95■■□□□ 1.1
LDB1-201ENST00000361198 PRLHRP49683 370 aa21.95■■□□□ 1.1
LDB1-201ENST00000361198 RPS14P62263 151 aaKnown RBP21.95■■□□□ 1.1
LDB1-201ENST00000361198 CHIT1Q13231 466 aa21.95■■□□□ 1.1
LDB1-201ENST00000361198 PMS2P3Q13401 168 aa21.95■■□□□ 1.1
LDB1-201ENST00000361198 SYTL3Q4VX76 610 aa21.95■■□□□ 1.1
LDB1-201ENST00000361198 FAM78AQ5JUQ0 283 aa21.95■■□□□ 1.1
LDB1-201ENST00000361198 CCNYL2Q5T2Q4 361 aa21.95■■□□□ 1.1
LDB1-201ENST00000361198 PNPT1Q8TCS8 783 aaKnown RBP21.95■■□□□ 1.1
LDB1-201ENST00000361198 ZNF583Q96ND8 569 aa21.95■■□□□ 1.1
LDB1-201ENST00000361198 V9GYQ6 96 aa21.95■■□□□ 1.1
LDB1-201ENST00000361198 TRIM64BA6NI03 449 aa21.94■■□□□ 1.1
LDB1-201ENST00000361198 CA3P07451 260 aa21.94■■□□□ 1.1
LDB1-201ENST00000361198 HLCSP50747 726 aa21.94■■□□□ 1.1
LDB1-201ENST00000361198 LBX1P52954 281 aa21.94■■□□□ 1.1
LDB1-201ENST00000361198 GAB4Q2WGN9 574 aa21.94■■□□□ 1.1
LDB1-201ENST00000361198 CCSMST1Q4G0I0 132 aa21.94■■□□□ 1.1
LDB1-201ENST00000361198 FAM109BQ6ICB4 259 aaPredicted RBP21.94■■□□□ 1.1
LDB1-201ENST00000361198 DNAJC14Q6Y2X3 702 aaPredicted RBP21.94■■□□□ 1.1
LDB1-201ENST00000361198 SFTPA1Q8IWL2 248 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms