RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 SLC5A10A0PJK1 596 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 TBC1D3FA6NER0 549 aaPredicted RBP17.1■□□□□ 0.33
NPAS3-202ENST00000356141 TBC1D3LB9A6J9 549 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 H0Y8X5 98 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 CATP04040 527 aaKnown RBP17.1■□□□□ 0.33
NPAS3-202ENST00000356141 TBC1D3HP0C7X1 549 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 CKMT2P17540 419 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 COL9A1P20849 921 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 ATP6V1C1P21283 382 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 GRIA2P42262 883 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 GSK3BP49841 420 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 TBPL1P62380 186 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 ILF2Q12905 390 aaKnown RBP17.1■□□□□ 0.33
NPAS3-202ENST00000356141 PPP1R8Q12972 351 aaKnown RBP17.1■□□□□ 0.33
NPAS3-202ENST00000356141 GTF2H3Q13889 308 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 LRRC23Q53EV4 343 aaPredicted RBP17.1■□□□□ 0.33
NPAS3-202ENST00000356141 AGBL4Q5VU57 503 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 TBC1D3GQ6DHY5 549 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 TBC1D3CQ6IPX1 549 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 OGFOD2Q6N063 350 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 PLD3Q8IV08 490 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 TBC1D3Q8IZP1 549 aaPredicted RBP17.1■□□□□ 0.33
NPAS3-202ENST00000356141 CIB1Q99828 191 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 INPP5KQ9BT40 448 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 XKR8Q9H6D3 395 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 SGK2Q9HBY8 427 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 EIF3LQ9Y262 564 aaKnown RBP17.1■□□□□ 0.33
NPAS3-202ENST00000356141 NUP210Q8TEM1 1887 aaPredicted RBP17.09■□□□□ 0.33
NPAS3-202ENST00000356141 SAC3D1A6NKF1 404 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 MAGEB17A8MXT2 336 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 VPS4BO75351 444 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 KRT6AP02538 564 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 FUCA1P04066 466 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 KRT6BP04259 564 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 LINGO3P0C6S8 592 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 SLC6A12P48065 614 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 KRT6CP48668 564 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 EMX2Q04743 252 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 EIF4HQ15056 248 aaKnown RBP17.09■□□□□ 0.33
NPAS3-202ENST00000356141 TLR1Q15399 786 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 SAMD4BQ5PRF9 694 aaKnown RBP17.09■□□□□ 0.33
NPAS3-202ENST00000356141 EFL1Q7Z2Z2 1120 aaKnown RBP17.09■□□□□ 0.33
NPAS3-202ENST00000356141 GALNT10Q86SR1 603 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 C10orf111Q8N326 155 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 JADE3Q92613 823 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 SLCO4A1Q96BD0 722 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 FOPNLQ96NB1 174 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 KCTD14Q9BQ13 255 aaPredicted RBP17.09■□□□□ 0.33
NPAS3-202ENST00000356141 ALG2Q9H553 416 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 CD300AQ9UGN4 299 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 PEX1O43933 1283 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 GSTM1P09488 218 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 HNF4AP41235 474 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 GSTM4Q03013 218 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 GBX1Q14549 363 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 ZFAND4Q86XD8 727 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 OR7A2PQ8NGA2 310 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 NTMT1Q9BV86 223 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 SORBS1Q9BX66 1292 aaKnown RBP17.09■□□□□ 0.33
NPAS3-202ENST00000356141 DZANK1Q9NVP4 752 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 C1orf109Q9NX04 203 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 EPS15L1Q9UBC2 864 aa17.09■□□□□ 0.33
NPAS3-202ENST00000356141 PDLIM1O00151 329 aa17.08■□□□□ 0.33
NPAS3-202ENST00000356141 MATN4O95460 622 aa17.08■□□□□ 0.33
NPAS3-202ENST00000356141 TGFB1P01137 390 aa17.08■□□□□ 0.33
NPAS3-202ENST00000356141 ATP4BP51164 291 aa17.08■□□□□ 0.33
NPAS3-202ENST00000356141 PHC1P78364 1004 aa17.08■□□□□ 0.33
NPAS3-202ENST00000356141 TMEM196Q5HYL7 178 aa17.08■□□□□ 0.33
NPAS3-202ENST00000356141 RBM12BQ8IXT5 1001 aaKnown RBP17.08■□□□□ 0.33
NPAS3-202ENST00000356141 TMEM125Q96AQ2 219 aa17.08■□□□□ 0.33
NPAS3-202ENST00000356141 OR52E6Q96RD3 313 aa17.08■□□□□ 0.33
NPAS3-202ENST00000356141 BRINP2Q9C0B6 783 aa17.08■□□□□ 0.33
NPAS3-202ENST00000356141 GPRC5BQ9NZH0 403 aa17.08■□□□□ 0.33
NPAS3-202ENST00000356141 LIMD1Q9UGP4 676 aa17.08■□□□□ 0.33
NPAS3-202ENST00000356141 VPS4AQ9UN37 437 aa17.08■□□□□ 0.33
NPAS3-202ENST00000356141 ZFR2Q9UPR6 939 aaKnown RBP17.08■□□□□ 0.33
NPAS3-202ENST00000356141 FAM234BA2RU67 622 aa17.08■□□□□ 0.32
NPAS3-202ENST00000356141 C1orf105O95561 183 aa17.08■□□□□ 0.32
NPAS3-202ENST00000356141 KLF8O95600 359 aaPredicted RBP17.08■□□□□ 0.32
NPAS3-202ENST00000356141 ATXN8OSP0DMR3 200 aa17.08■□□□□ 0.32
NPAS3-202ENST00000356141 CDKN2CP42773 168 aa17.08■□□□□ 0.32
NPAS3-202ENST00000356141 FRG2Q64ET8 278 aa17.08■□□□□ 0.32
NPAS3-202ENST00000356141 OR10A6Q8NH74 314 aa17.08■□□□□ 0.32
NPAS3-202ENST00000356141 CSGALNACT1Q8TDX6 532 aa17.08■□□□□ 0.32
NPAS3-202ENST00000356141 PPP3R2Q96LZ3 170 aa17.08■□□□□ 0.32
NPAS3-202ENST00000356141 FRG2BQ96QU4 278 aa17.08■□□□□ 0.32
NPAS3-202ENST00000356141 KLHL4Q9C0H6 718 aa17.08■□□□□ 0.32
NPAS3-202ENST00000356141 TRIM39Q9HCM9 518 aa17.08■□□□□ 0.32
NPAS3-202ENST00000356141 GID8Q9NWU2 228 aa17.08■□□□□ 0.32
NPAS3-202ENST00000356141 LEF1Q9UJU2 399 aaPredicted RBP17.08■□□□□ 0.32
NPAS3-202ENST00000356141 TMCO1Q9UM00 188 aa17.08■□□□□ 0.32
NPAS3-202ENST00000356141 DTNAQ9Y4J8 743 aa17.08■□□□□ 0.32
NPAS3-202ENST00000356141 AP4S1Q9Y587 144 aa17.08■□□□□ 0.32
NPAS3-202ENST00000356141 OR52A4PA6NMU1 304 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 ANKRD28O15084 1053 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 ARPC2O15144 300 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 LILRB5O75023 590 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 LTBRP36941 435 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 IRF4Q15306 451 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 C6orf52Q5T4I8 152 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms