RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 NT5DC2Q9H857 520 aa16.68■□□□□ 0.26
VPS13B-201ENST00000355155 LIMD1Q9UGP4 676 aa16.68■□□□□ 0.26
VPS13B-201ENST00000355155 PCDHGA11Q9Y5H2 935 aa16.68■□□□□ 0.26
VPS13B-201ENST00000355155 E7EQ34 232 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 MAP3K7O43318 606 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 DNAJA2O60884 412 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 FUCA1P04066 466 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 C8BP07358 591 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 ITPKAP23677 461 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 TBPL1P62380 186 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 IRF8Q02556 426 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 TRIM25Q14258 630 aaKnown RBP16.67■□□□□ 0.26
VPS13B-201ENST00000355155 RCN1Q15293 331 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 CRTC3Q6UUV7 619 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 TMEM92Q6UXU6 159 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 WASH2PQ6VEQ5 465 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 FAM3CQ92520 227 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 ZUFSPQ96AP4 578 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 PYCR2Q96C36 320 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 REPS1Q96D71 796 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 HAUS8Q9BT25 410 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 WASH6PQ9NQA3 447 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 CCDC154A6NI56 674 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 H3BQ06 376 aaPredicted RBP16.67■□□□□ 0.26
VPS13B-201ENST00000355155 FFAR3O14843 346 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 GPR42O15529 346 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 APBB3O95704 486 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 PAK4O96013 591 aaPredicted RBP16.67■□□□□ 0.26
VPS13B-201ENST00000355155 NDUFV2P19404 249 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 LEXMQ3ZCV2 418 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 VPS26BQ4G0F5 336 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 RIMKLAQ8IXN7 391 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 PCBD2Q9H0N5 130 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 PELI2Q9HAT8 420 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 MAPRE3Q9UPY8 281 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 MAN2B2Q9Y2E5 1009 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 NEUROG3Q9Y4Z2 214 aa16.67■□□□□ 0.26
VPS13B-201ENST00000355155 POLR3HQ9Y535 204 aaPredicted RBP16.67■□□□□ 0.26
VPS13B-201ENST00000355155 TNFRSF10CO14798 259 aa16.66■□□□□ 0.26
VPS13B-201ENST00000355155 CASQ2O14958 399 aaPredicted RBP16.66■□□□□ 0.26
VPS13B-201ENST00000355155 SORBS2O94875 1100 aaKnown RBP16.66■□□□□ 0.26
VPS13B-201ENST00000355155 IL6P05231 212 aa16.66■□□□□ 0.26
VPS13B-201ENST00000355155 SLC2A4P14672 509 aa16.66■□□□□ 0.26
VPS13B-201ENST00000355155 XRCC1P18887 633 aaPredicted RBP16.66■□□□□ 0.26
VPS13B-201ENST00000355155 SLC6A2P23975 617 aa16.66■□□□□ 0.26
VPS13B-201ENST00000355155 CLNS1AP54105 237 aaKnown RBP16.66■□□□□ 0.26
VPS13B-201ENST00000355155 SLC44A4Q53GD3 710 aa16.66■□□□□ 0.26
VPS13B-201ENST00000355155 EP400NLQ6ZTU2 488 aa16.66■□□□□ 0.26
VPS13B-201ENST00000355155 PTRH1Q86Y79 214 aaKnown RBP16.66■□□□□ 0.26
VPS13B-201ENST00000355155 C1orf50Q9BV19 199 aa16.66■□□□□ 0.26
VPS13B-201ENST00000355155 L3MBTL1Q9Y468 752 aa16.66■□□□□ 0.26
VPS13B-201ENST00000355155 LRRC42Q9Y546 428 aa16.66■□□□□ 0.26
VPS13B-201ENST00000355155 HS3ST3A1Q9Y663 406 aa16.66■□□□□ 0.26
VPS13B-201ENST00000355155 H3BNX3 289 aa16.66■□□□□ 0.26
VPS13B-201ENST00000355155 C1GALT1C1LP0DN25 315 aa16.66■□□□□ 0.26
VPS13B-201ENST00000355155 ANPEPP15144 967 aa16.66■□□□□ 0.26
VPS13B-201ENST00000355155 HOXB9P17482 250 aaPredicted RBP16.66■□□□□ 0.26
VPS13B-201ENST00000355155 NUDT1P36639 197 aa16.66■□□□□ 0.26
VPS13B-201ENST00000355155 CCR5P51681 352 aa16.66■□□□□ 0.26
VPS13B-201ENST00000355155 EEFSECP57772 596 aaKnown RBP16.66■□□□□ 0.26
VPS13B-201ENST00000355155 RPL38P63173 70 aaKnown RBP16.66■□□□□ 0.26
VPS13B-201ENST00000355155 CPSF6Q16630 551 aaKnown RBP eCLIP16.66■□□□□ 0.26
VPS13B-201ENST00000355155 IMPG1Q17R60 797 aa16.66■□□□□ 0.26
VPS13B-201ENST00000355155 IER5LQ5T953 404 aa16.66■□□□□ 0.26
VPS13B-201ENST00000355155 SUSD1Q6UWL2 747 aa16.66■□□□□ 0.26
VPS13B-201ENST00000355155 DLEU7Q6UYE1 221 aa16.66■□□□□ 0.26
VPS13B-201ENST00000355155 RPLP0P6Q8NHW5 317 aa16.66■□□□□ 0.26
VPS13B-201ENST00000355155 TFGQ92734 400 aaPredicted RBP16.66■□□□□ 0.26
VPS13B-201ENST00000355155 TMEM125Q96AQ2 219 aa16.66■□□□□ 0.26
VPS13B-201ENST00000355155 GMEB1Q9Y692 573 aa16.66■□□□□ 0.26
VPS13B-201ENST00000355155 BCKDHAP12694 445 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 GABRG2P18507 467 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 HALP42357 657 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 YPEL5P62699 121 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 BNIP2Q12982 314 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 XKR6Q5GH73 641 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 GALNT18Q6P9A2 607 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 SLC15A3Q8IY34 581 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 LRCH3Q96II8 777 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 INSM2Q96T92 566 aaPredicted RBP16.65■□□□□ 0.26
VPS13B-201ENST00000355155 PCOLCE2Q9UKZ9 415 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 AP3M1Q9Y2T2 418 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 PRORSD1PA6NEY8 169 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 PPP2CBP62714 309 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 PPP2CAP67775 309 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 MS4A2Q01362 244 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 HMGCS1Q01581 520 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 MTAPQ13126 283 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 TDGQ13569 410 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 PAGE3Q5JUK9 113 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 C6orf10Q5SRN2 563 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 NXPE4Q6UWF7 544 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 SLC6A17Q9H1V8 727 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 CCDC177Q9NQR7 707 aaPredicted RBP16.65■□□□□ 0.26
VPS13B-201ENST00000355155 GPR27Q9NS67 375 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 ADGRE2Q9UHX3 823 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 DYRK1BQ9Y463 629 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 CACNB4O00305 520 aaPredicted RBP16.65■□□□□ 0.26
VPS13B-201ENST00000355155 SERPINB1P30740 379 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 PIK3CBP42338 1070 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms