RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 TRAF3Q13114 568 aa26.16■■□□□ 1.78
SSBP4-202ENST00000348495 PRAMEF13Q5VWM6 474 aa26.16■■□□□ 1.78
SSBP4-202ENST00000348495 LCTLQ6UWM7 567 aa26.16■■□□□ 1.78
SSBP4-202ENST00000348495 DBX2Q6ZNG2 339 aa26.16■■□□□ 1.78
SSBP4-202ENST00000348495 ZNF438Q7Z4V0 828 aa26.16■■□□□ 1.78
SSBP4-202ENST00000348495 CUZD1Q86UP6 607 aa26.16■■□□□ 1.78
SSBP4-202ENST00000348495 SNX31Q8N9S9 440 aa26.16■■□□□ 1.78
SSBP4-202ENST00000348495 AGAP11Q8TF27 550 aa26.16■■□□□ 1.78
SSBP4-202ENST00000348495 PCBD2Q9H0N5 130 aa26.16■■□□□ 1.78
SSBP4-202ENST00000348495 TNFRSF12AQ9NP84 129 aa26.16■■□□□ 1.78
SSBP4-202ENST00000348495 GPRC5BQ9NZH0 403 aa26.16■■□□□ 1.78
SSBP4-202ENST00000348495 EPB41L3Q9Y2J2 1087 aaPredicted RBP26.16■■□□□ 1.78
SSBP4-202ENST00000348495 OTOGLQ3ZCN5 2332 aa26.16■■□□□ 1.78
SSBP4-202ENST00000348495 GMNCA6NCL1 334 aa26.15■■□□□ 1.78
SSBP4-202ENST00000348495 SIGLEC6O43699 453 aa26.15■■□□□ 1.78
SSBP4-202ENST00000348495 NUDT21O43809 227 aaKnown RBP26.15■■□□□ 1.78
SSBP4-202ENST00000348495 LMNAP02545 664 aaKnown RBP26.15■■□□□ 1.78
SSBP4-202ENST00000348495 CHRM5P08912 532 aaPredicted RBP26.15■■□□□ 1.78
SSBP4-202ENST00000348495 PRDX3P30048 256 aaKnown RBP26.15■■□□□ 1.78
SSBP4-202ENST00000348495 NTMT1Q9BV86 223 aa26.15■■□□□ 1.78
SSBP4-202ENST00000348495 LDHAL6BQ9BYZ2 381 aaPredicted RBP26.15■■□□□ 1.78
SSBP4-202ENST00000348495 SHCBP1LQ9BZQ2 653 aa26.15■■□□□ 1.78
SSBP4-202ENST00000348495 FGFR1OP2Q9NVK5 253 aa26.15■■□□□ 1.78
SSBP4-202ENST00000348495 SPHK1Q9NYA1 384 aa26.15■■□□□ 1.78
SSBP4-202ENST00000348495 RAP2CQ9Y3L5 183 aa26.15■■□□□ 1.78
SSBP4-202ENST00000348495 RNF215Q9Y6U7 377 aa26.15■■□□□ 1.78
SSBP4-202ENST00000348495 LY6G6EA0A0G2JKS1 128 aa26.14■■□□□ 1.78
SSBP4-202ENST00000348495 PRAMEF4O60810 478 aa26.14■■□□□ 1.78
SSBP4-202ENST00000348495 LRP3O75074 770 aa26.14■■□□□ 1.78
SSBP4-202ENST00000348495 OTCP00480 354 aa26.14■■□□□ 1.78
SSBP4-202ENST00000348495 PKNOX1P55347 436 aa26.14■■□□□ 1.78
SSBP4-202ENST00000348495 SPEM2Q0P670 501 aa26.14■■□□□ 1.78
SSBP4-202ENST00000348495 PRKAA1Q13131 559 aa26.14■■□□□ 1.78
SSBP4-202ENST00000348495 TSTA3Q13630 321 aaPredicted RBP26.14■■□□□ 1.78
SSBP4-202ENST00000348495 PRAMEF9Q5VWM5 478 aa26.14■■□□□ 1.78
SSBP4-202ENST00000348495 SYVN1Q86TM6 617 aa26.14■■□□□ 1.78
SSBP4-202ENST00000348495 ZNF781Q8N8C0 355 aa26.14■■□□□ 1.78
SSBP4-202ENST00000348495 OR2A1Q8NGT9 310 aa26.14■■□□□ 1.78
SSBP4-202ENST00000348495 APOLD1Q96LR9 279 aa26.14■■□□□ 1.78
SSBP4-202ENST00000348495 TBC1D10AQ9BXI6 508 aa26.14■■□□□ 1.78
SSBP4-202ENST00000348495 ILKAPQ9H0C8 392 aaPredicted RBP26.14■■□□□ 1.78
SSBP4-202ENST00000348495 MID1IP1Q9NPA3 183 aa26.14■■□□□ 1.78
SSBP4-202ENST00000348495 SH2B3Q9UQQ2 575 aa26.14■■□□□ 1.78
SSBP4-202ENST00000348495 STK38LQ9Y2H1 464 aa26.14■■□□□ 1.78
SSBP4-202ENST00000348495 KCNE2Q9Y6J6 123 aa26.14■■□□□ 1.78
SSBP4-202ENST00000348495 U3KQA8 63 aa26.14■■□□□ 1.78
SSBP4-202ENST00000348495 ESRRBO95718 433 aa26.14■■□□□ 1.77
SSBP4-202ENST00000348495 GLB1P16278 677 aa26.14■■□□□ 1.77
SSBP4-202ENST00000348495 MPSTP25325 297 aa26.14■■□□□ 1.77
SSBP4-202ENST00000348495 RBBP7Q16576 425 aa26.14■■□□□ 1.77
SSBP4-202ENST00000348495 EID2Q8N6I1 236 aa26.14■■□□□ 1.77
SSBP4-202ENST00000348495 NEIL2Q969S2 332 aa26.14■■□□□ 1.77
SSBP4-202ENST00000348495 HAUS8Q9BT25 410 aa26.14■■□□□ 1.77
SSBP4-202ENST00000348495 SEMA4GQ9NTN9 838 aa26.14■■□□□ 1.77
SSBP4-202ENST00000348495 ABCF3Q9NUQ8 709 aa26.14■■□□□ 1.77
SSBP4-202ENST00000348495 LRIT1Q9P2V4 623 aa26.14■■□□□ 1.77
SSBP4-202ENST00000348495 TAC3Q9UHF0 121 aa26.14■■□□□ 1.77
SSBP4-202ENST00000348495 ZDHHC2Q9UIJ5 367 aa26.14■■□□□ 1.77
SSBP4-202ENST00000348495 OR6C74A6NCV1 312 aa26.13■■□□□ 1.77
SSBP4-202ENST00000348495 CDX4O14627 284 aaPredicted RBP26.13■■□□□ 1.77
SSBP4-202ENST00000348495 PSMB5P28074 263 aa26.13■■□□□ 1.77
SSBP4-202ENST00000348495 CCNG1P51959 295 aa26.13■■□□□ 1.77
SSBP4-202ENST00000348495 ERVPABLB-1P60509 514 aa26.13■■□□□ 1.77
SSBP4-202ENST00000348495 E2F2Q14209 437 aa26.13■■□□□ 1.77
SSBP4-202ENST00000348495 NR1D2Q14995 579 aa26.13■■□□□ 1.77
SSBP4-202ENST00000348495 CSRP2Q16527 193 aa26.13■■□□□ 1.77
SSBP4-202ENST00000348495 GPRIN3Q6ZVF9 776 aa26.13■■□□□ 1.77
SSBP4-202ENST00000348495 FLVCR1-AS1Q8TAF5 88 aa26.13■■□□□ 1.77
SSBP4-202ENST00000348495 SLC38A3Q99624 504 aa26.13■■□□□ 1.77
SSBP4-202ENST00000348495 PADI4Q9UM07 663 aa26.13■■□□□ 1.77
SSBP4-202ENST00000348495 PCDHB11Q9Y5F2 797 aa26.13■■□□□ 1.77
SSBP4-202ENST00000348495 PCM1Q15154 2024 aa26.12■■□□□ 1.77
SSBP4-202ENST00000348495 WFS1O76024 890 aa26.12■■□□□ 1.77
SSBP4-202ENST00000348495 GNAZP19086 355 aa26.12■■□□□ 1.77
SSBP4-202ENST00000348495 BIRC2Q13490 618 aa26.12■■□□□ 1.77
SSBP4-202ENST00000348495 KIR2DS3Q14952 304 aa26.12■■□□□ 1.77
SSBP4-202ENST00000348495 THEMIS2Q5TEJ8 643 aa26.12■■□□□ 1.77
SSBP4-202ENST00000348495 LETMD1Q6P1Q0 360 aa26.12■■□□□ 1.77
SSBP4-202ENST00000348495 CRLF3Q8IUI8 442 aa26.12■■□□□ 1.77
SSBP4-202ENST00000348495 CDK15Q96Q40 435 aa26.12■■□□□ 1.77
SSBP4-202ENST00000348495 ACAT2Q9BWD1 397 aa26.12■■□□□ 1.77
SSBP4-202ENST00000348495 EPN3Q9H201 632 aa26.12■■□□□ 1.77
SSBP4-202ENST00000348495 PNPOQ9NVS9 261 aa26.12■■□□□ 1.77
SSBP4-202ENST00000348495 GOLGA4Q13439 2230 aaKnown RBP26.12■■□□□ 1.77
SSBP4-202ENST00000348495 RHPN2P1A8MT19 583 aa26.11■■□□□ 1.77
SSBP4-202ENST00000348495 E7EQ34 232 aa26.11■■□□□ 1.77
SSBP4-202ENST00000348495 FGF4P08620 206 aa26.11■■□□□ 1.77
SSBP4-202ENST00000348495 MYF5P13349 255 aa26.11■■□□□ 1.77
SSBP4-202ENST00000348495 YBX1P67809 324 aaKnown RBP26.11■■□□□ 1.77
SSBP4-202ENST00000348495 SUZ12Q15022 739 aaKnown RBP26.11■■□□□ 1.77
SSBP4-202ENST00000348495 SLCO4C1Q6ZQN7 724 aa26.11■■□□□ 1.77
SSBP4-202ENST00000348495 DCBLD1Q8N8Z6 715 aa26.11■■□□□ 1.77
SSBP4-202ENST00000348495 OR4F6Q8NGB9 312 aa26.11■■□□□ 1.77
SSBP4-202ENST00000348495 ATP6V1E2Q96A05 226 aa26.11■■□□□ 1.77
SSBP4-202ENST00000348495 GRAMD1AQ96CP6 724 aa26.11■■□□□ 1.77
SSBP4-202ENST00000348495 WDR34Q96EX3 536 aa26.11■■□□□ 1.77
SSBP4-202ENST00000348495 PARD6AQ9NPB6 346 aa26.11■■□□□ 1.77
SSBP4-202ENST00000348495 RXFP3Q9NSD7 469 aa26.11■■□□□ 1.77
SSBP4-202ENST00000348495 NCDNQ9UBB6 729 aa26.11■■□□□ 1.77
SSBP4-202ENST00000348495 DYRK1BQ9Y463 629 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms