RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 SERPINA1P01009 418 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 CDK4P11802 303 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 ZNF30P17039 623 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 CYP2A7P20853 494 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 WEE1P30291 646 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 CTSCP53634 463 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 EPHA5P54756 1037 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 ABRQ12979 859 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 SP140Q13342 867 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 TMEM259Q4ZIN3 620 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 PLPP4Q5VZY2 271 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 NOXRED1Q6NXP6 359 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 ZDHHC13Q8IUH4 622 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 ERI1Q8IV48 349 aaKnown RBP15□□□□□ -0.01
UPF3B-202ENST00000345865 LEMD2Q8NC56 503 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 PHF12Q96QT6 1004 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 IFT80Q9P2H3 777 aaPredicted RBP15□□□□□ -0.01
UPF3B-202ENST00000345865 CHD9Q3L8U1 2897 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 TMX2-CTNND1H3BSU7 103 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 RETP07949 1114 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 JUPP14923 745 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 PRKACGP22612 351 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 PIGAP37287 484 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 AP1S2P56377 157 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 PPP2R2BQ00005 443 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 CCNYL2Q5T2Q4 361 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 ADNP2Q6IQ32 1131 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 KIAA0907Q7Z7F0 614 aaPredicted RBP14.99□□□□□ -0.01
UPF3B-202ENST00000345865 CHPFQ8IZ52 775 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 OR7A2PQ8NGA2 310 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 NCLNQ969V3 563 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 ISOC1Q96CN7 298 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 FAM120BQ96EK7 910 aaKnown RBP14.99□□□□□ -0.01
UPF3B-202ENST00000345865 ITCHQ96J02 903 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 MBOAT4Q96T53 435 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 OSBPL10Q9BXB5 764 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 AMBRA1Q9C0C7 1298 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 A0A1W2PQ67 120 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 CARNS1A5YM72 827 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 C16orf96A6NNT2 1141 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 E7EQ34 232 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 CLGNO14967 610 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 TSPAN6O43657 245 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 RHOP08100 348 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 RECQLP46063 649 aaPredicted RBP14.99□□□□□ -0.01
UPF3B-202ENST00000345865 PREPP48147 710 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 DCDC1P59894 354 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 ZNF77Q15935 545 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 AP1ARQ63HQ0 302 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 ELMSAN1Q6PJG2 1045 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 KCTD8Q6ZWB6 473 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 GPR180Q86V85 440 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 RASGEF1AQ8N9B8 481 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 DDHD1Q8NEL9 900 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 WDR20Q8TBZ3 569 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 ASZ1Q8WWH4 475 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 SGCDQ92629 289 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 FBXL8Q96CD0 374 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 MTERF1Q99551 399 aaKnown RBP14.99□□□□□ -0.01
UPF3B-202ENST00000345865 SAGE1Q9NXZ1 904 aa14.99□□□□□ -0.01
UPF3B-202ENST00000345865 KIAA0100Q14667 2235 aaKnown RBP14.99□□□□□ -0.01
UPF3B-202ENST00000345865 YY2O15391 372 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 SCN2BO60939 215 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 SYN1P17600 705 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 HLCSP50747 726 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 WNT3P56703 355 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 RAB39AQ14964 217 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 UGT8Q16880 541 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 CES5AQ6NT32 575 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 DOK6Q6PKX4 331 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 NEK10Q6ZWH5 1172 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 TMEM132CQ8N3T6 1108 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 CLP1Q92989 425 aaKnown RBP14.98□□□□□ -0.01
UPF3B-202ENST00000345865 C12orf43Q96C57 262 aaKnown RBP14.98□□□□□ -0.01
UPF3B-202ENST00000345865 PAWRQ96IZ0 340 aaKnown RBP14.98□□□□□ -0.01
UPF3B-202ENST00000345865 OR4K3Q96R72 315 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 OSBPL6Q9BZF3 934 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 REXO4Q9GZR2 422 aaKnown RBP14.98□□□□□ -0.01
UPF3B-202ENST00000345865 POLR1BQ9H9Y6 1135 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 THG1LQ9NWX6 298 aaKnown RBP14.98□□□□□ -0.01
UPF3B-202ENST00000345865 TMED5Q9Y3A6 229 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 SERTM1A2A2V5 107 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 ZBBXA8MT70 800 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 RFXANKO14593 260 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 PER2O15055 1255 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 GSTM1P09488 218 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 CYP2A6P11509 494 aaPredicted RBP14.98□□□□□ -0.01
UPF3B-202ENST00000345865 POLR2EP19388 210 aaKnown RBP14.98□□□□□ -0.01
UPF3B-202ENST00000345865 ESRRGP62508 458 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 HTRA4P83105 476 aaPredicted RBP14.98□□□□□ -0.01
UPF3B-202ENST00000345865 IRF8Q02556 426 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 GSTM4Q03013 218 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 MTAPQ13126 283 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 CBX2Q14781 532 aaPredicted RBP14.98□□□□□ -0.01
UPF3B-202ENST00000345865 SPESP1Q6UW49 350 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 TECPR1Q7Z6L1 1165 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 THOC6Q86W42 341 aaKnown RBP14.98□□□□□ -0.01
UPF3B-202ENST00000345865 TRAM1L1Q8N609 369 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 DNAJB8Q8NHS0 232 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 FCRL1Q96LA6 429 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms