RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 TMEM80Q96HE8 168 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 MKKSQ9NPJ1 570 aaPredicted RBP18.96■□□□□ 0.63
HDAC4-201ENST00000345617 HSD3B2P26439 372 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 PBX1P40424 430 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 TPGS1Q6ZTW0 290 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 ENDOVQ8N8Q3 282 aaKnown RBP18.96■□□□□ 0.63
HDAC4-201ENST00000345617 HCN2Q9UL51 889 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 ISM1B1AKI9 464 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 KLRC4O43908 158 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 TAF1AQ15573 450 aaPredicted RBP18.96■□□□□ 0.63
HDAC4-201ENST00000345617 SCGB2B2Q4G0G5 96 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 NCEH1Q6PIU2 408 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 ZNF565Q8N9K5 539 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 POTEKPQ9BYX7 375 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 TBC1D14Q9P2M4 693 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 MT-ND5P03915 603 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 PBX3P40426 434 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 NDST2P52849 883 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 MAD2L1BPQ15013 274 aaPredicted RBP18.96■□□□□ 0.63
HDAC4-201ENST00000345617 BRSK1Q8TDC3 778 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 TCTEX1D2Q8WW35 142 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 MSANTD3Q96H12 275 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 CCDC32Q9BV29 185 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 SLC7A8Q9UHI5 535 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 CHMP24386 653 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 CYP4V2Q6ZWL3 525 aaPredicted RBP18.96■□□□□ 0.63
HDAC4-201ENST00000345617 SSX6Q7RTT6 188 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 OR10G2Q8NGC3 310 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 BCAS2O75934 225 aaPredicted RBP18.96■□□□□ 0.63
HDAC4-201ENST00000345617 CYP3A5P20815 502 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 TAS2R40P59535 323 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 SP140Q13342 867 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 MEDAGQ5VYS4 303 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 NXPE1Q8N323 547 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 OR4K2Q8NGD2 314 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 SHKBP1Q8TBC3 707 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 CPT1BQ92523 772 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 ZBTB26Q9HCK0 441 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 C19orf12Q9NSK7 152 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 GRIN3BO60391 1043 aa18.96■□□□□ 0.62
HDAC4-201ENST00000345617 GJA1P17302 382 aa18.96■□□□□ 0.62
HDAC4-201ENST00000345617 ITPKAP23677 461 aa18.96■□□□□ 0.62
HDAC4-201ENST00000345617 SLC18A2Q05940 514 aa18.96■□□□□ 0.62
HDAC4-201ENST00000345617 ZNF676Q8N7Q3 588 aa18.96■□□□□ 0.62
HDAC4-201ENST00000345617 GATAD2BQ8WXI9 593 aa18.96■□□□□ 0.62
HDAC4-201ENST00000345617 SLC35G5Q96KT7 338 aa18.96■□□□□ 0.62
HDAC4-201ENST00000345617 SH3PXD2BA1X283 911 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 GABRDO14764 452 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 MSCO60682 206 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 IFNA10P01566 189 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 ICAM3P32942 547 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 ARFRP1Q13795 201 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 RFTN1Q14699 578 aaPredicted RBP18.95■□□□□ 0.62
HDAC4-201ENST00000345617 NIPA2Q8N8Q9 360 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 PGLYRP2Q96PD5 576 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 ATF5Q9Y2D1 282 aaPredicted RBP18.95■□□□□ 0.62
HDAC4-201ENST00000345617 HSD11B1P28845 292 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 YBEYP58557 167 aaPredicted RBP18.95■□□□□ 0.62
HDAC4-201ENST00000345617 TLR1Q15399 786 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 RPLP0P6Q8NHW5 317 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 POC1BQ8TC44 478 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 TAS2R9Q9NYW1 312 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 PABPC4LP0CB38 370 aaKnown RBP18.95■□□□□ 0.62
HDAC4-201ENST00000345617 CAV3P56539 151 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 RAP1GAP2Q684P5 730 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 UBQLNLQ8IYU4 475 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 WDSUB1Q8N9V3 476 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 FAM46DQ8NEK8 389 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 TAS2R8Q9NYW2 309 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 ARL5CA6NH57 179 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 GBE1Q04446 702 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 ZNF641Q96N77 438 aaPredicted RBP18.95■□□□□ 0.62
HDAC4-201ENST00000345617 EPYCQ99645 322 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 BRINP2Q9C0B6 783 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 SDCBP2Q9H190 292 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 SLC7A4O43246 635 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 RFPL1O75677 317 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 GABBR2O75899 941 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 DNASE1L3Q13609 305 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 BTG3Q14201 252 aaPredicted RBP18.95■□□□□ 0.62
HDAC4-201ENST00000345617 CADM2Q8N3J6 435 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 DUSP26Q9BV47 211 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 DUOX1Q9NRD9 1551 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 A0A1W2PRQ8 180 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 H1F0P07305 194 aaKnown RBP18.95■□□□□ 0.62
HDAC4-201ENST00000345617 BTBD16Q32M84 506 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 MAELQ96JY0 434 aaKnown RBP18.95■□□□□ 0.62
HDAC4-201ENST00000345617 B3GALT2O43825 422 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 SSX4O60224 188 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 HPRP00739 348 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 VARSP26640 1264 aaKnown RBP18.95■□□□□ 0.62
HDAC4-201ENST00000345617 MRPS6P82932 125 aaKnown RBP18.95■□□□□ 0.62
HDAC4-201ENST00000345617 RFWD3Q6PCD5 774 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 OR5B12Q96R08 314 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 SLC6A16Q9GZN6 736 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 ABI3Q9P2A4 366 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 WASF3Q9UPY6 502 aa18.95■□□□□ 0.62
HDAC4-201ENST00000345617 KLHL33A6NCF5 533 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 CD47Q08722 323 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 SCARB2Q14108 478 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms