RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 HNRNPLLQ8WVV9 542 aaKnown RBP14.68□□□□□ -0.06
UBE3B-201ENST00000340074 CCDC138Q96M89 665 aa14.68□□□□□ -0.06
UBE3B-201ENST00000340074 MIPEPQ99797 713 aa14.68□□□□□ -0.06
UBE3B-201ENST00000340074 CHRNA10Q9GZZ6 450 aa14.68□□□□□ -0.06
UBE3B-201ENST00000340074 FANCEQ9HB96 536 aa14.68□□□□□ -0.06
UBE3B-201ENST00000340074 ABCF3Q9NUQ8 709 aa14.68□□□□□ -0.06
UBE3B-201ENST00000340074 INTS7Q9NVH2 962 aaKnown RBP14.68□□□□□ -0.06
UBE3B-201ENST00000340074 STOX2Q9P2F5 926 aaPredicted RBP14.68□□□□□ -0.06
UBE3B-201ENST00000340074 TMEM184BQ9Y519 407 aaPredicted RBP14.68□□□□□ -0.06
UBE3B-201ENST00000340074 CCDC88CQ9P219 2028 aa14.68□□□□□ -0.06
UBE3B-201ENST00000340074 SEC16AO15027 2179 aa14.68□□□□□ -0.06
UBE3B-201ENST00000340074 TEX51A0A1B0GUA7 166 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 NPEPPSL1A6NEC2 478 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 CDC7O00311 574 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 HCRTR1O43613 425 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 RAD1O60671 282 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 KIAA0754O94854 1291 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 FKBP9O95302 570 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 HIST1H2AGP0C0S8 130 aaPredicted RBP14.67□□□□□ -0.06
UBE3B-201ENST00000340074 MYBL2P10244 700 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 HIST1H2ADP20671 130 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 RPA3P35244 121 aaPredicted RBP14.67□□□□□ -0.06
UBE3B-201ENST00000340074 GRIA3P42263 894 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 PMS2P54278 862 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 TLE3Q04726 772 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 DEFB110Q30KQ9 67 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 MROH9Q5TGP6 573 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 FIGLAQ6QHK4 219 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 TIPARPQ7Z3E1 657 aaKnown RBP14.67□□□□□ -0.06
UBE3B-201ENST00000340074 CMC1Q7Z7K0 106 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 OR1L3Q8NH93 324 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 UHMK1Q8TAS1 419 aaKnown RBP14.67□□□□□ -0.06
UBE3B-201ENST00000340074 ANKRD7Q92527 254 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 NKD1Q969G9 470 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 HIST1H2AHQ96KK5 128 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 HIST1H2AJQ99878 128 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 H2AFJQ9BTM1 129 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 TRIM54Q9BYV2 358 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 UNKQ9C0B0 810 aaKnown RBP14.67□□□□□ -0.06
UBE3B-201ENST00000340074 ARL15Q9NXU5 204 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 TAC3Q9UHF0 121 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 PTPRQQ9UMZ3 2332 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 ITPR1Q14643 2758 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 MGAQ8IWI9 3026 aa14.67□□□□□ -0.06
UBE3B-201ENST00000340074 A0A087WUV0 522 aaPredicted RBP14.66□□□□□ -0.06
UBE3B-201ENST00000340074 HMX2A2RU54 273 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 PABPN1LA6NDY0 278 aaKnown RBP14.66□□□□□ -0.06
UBE3B-201ENST00000340074 SLU7O95391 586 aaKnown RBP14.66□□□□□ -0.06
UBE3B-201ENST00000340074 DLGAP3O95886 979 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 NTRK1P04629 796 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 CCDC166P0CW27 439 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 CMPK1P30085 196 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 GMPRP36959 345 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 GABRA4P48169 554 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 SRSF6Q13247 344 aaKnown RBP14.66□□□□□ -0.06
UBE3B-201ENST00000340074 BMPR2Q13873 1038 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 PPP1R3AQ16821 1122 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 PRAMEF17Q5VTA0 474 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 FCRL6Q6DN72 434 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 C19orf48Q6RUI8 117 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 AGTRAPQ6RW13 159 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 RAPH1Q70E73 1250 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 TRMT10CQ7L0Y3 403 aaKnown RBP14.66□□□□□ -0.06
UBE3B-201ENST00000340074 TMEM126BQ8IUX1 230 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 CACNA2D3Q8IZS8 1091 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 NLGN4XQ8N0W4 816 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 SPATA6LQ8N4H0 392 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 DNAJC22Q8N4W6 341 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 EIF1ADQ8N9N8 165 aaKnown RBP14.66□□□□□ -0.06
UBE3B-201ENST00000340074 NLGN4YQ8NFZ3 816 aaPredicted RBP14.66□□□□□ -0.06
UBE3B-201ENST00000340074 OR8K5Q8NH50 307 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 N4BP2L2Q92802 583 aaPredicted RBP14.66□□□□□ -0.06
UBE3B-201ENST00000340074 FCRL4Q96PJ5 515 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 TXLNGYQ9BZA5 131 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 DERL2Q9GZP9 239 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 ANKZF1Q9H8Y5 726 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 UTP6Q9NYH9 597 aaKnown RBP14.66□□□□□ -0.06
UBE3B-201ENST00000340074 NOVA2Q9UNW9 492 aaKnown RBP14.66□□□□□ -0.06
UBE3B-201ENST00000340074 SSUH2Q9Y2M2 353 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 CACNA1BQ00975 2339 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 TARM1B6A8C7 271 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 POC1B-GALNT4F8VUJ3 575 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 RIPK2O43353 540 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 SCRG1O75711 98 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 GUCA1CO95843 209 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 INHBAP08476 426 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 ENO2P09104 434 aaPredicted RBP14.66□□□□□ -0.06
UBE3B-201ENST00000340074 DEKP35659 375 aaKnown RBP14.66□□□□□ -0.06
UBE3B-201ENST00000340074 ATP1A2P50993 1020 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 ITGA1P56199 1179 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 AP1S2P56377 157 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 TBPL1P62380 186 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 TSNQ15631 228 aaKnown RBP14.66□□□□□ -0.06
UBE3B-201ENST00000340074 THEMIS2Q5TEJ8 643 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 BROXQ5VW32 411 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 ICE2Q659A1 982 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 VASH2Q86V25 355 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 IL22RA1Q8N6P7 574 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 GALNT6Q8NCL4 622 aa14.66□□□□□ -0.06
UBE3B-201ENST00000340074 SLC44A1Q8WWI5 657 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms