RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 PRDX3P30048 256 aaKnown RBP16.89■□□□□ 0.29
CHGA-202ENST00000334654 HPDP32754 393 aaPredicted RBP16.89■□□□□ 0.29
CHGA-202ENST00000334654 LSSP48449 732 aa16.89■□□□□ 0.29
CHGA-202ENST00000334654 PRKAA2P54646 552 aa16.89■□□□□ 0.29
CHGA-202ENST00000334654 GFERP55789 205 aa16.89■□□□□ 0.29
CHGA-202ENST00000334654 ILKQ13418 452 aa16.89■□□□□ 0.29
CHGA-202ENST00000334654 KLHL35Q6PF15 583 aa16.89■□□□□ 0.29
CHGA-202ENST00000334654 WDR74Q6RFH5 385 aaPredicted RBP16.89■□□□□ 0.29
CHGA-202ENST00000334654 ALYREFQ86V81 257 aaKnown RBP16.89■□□□□ 0.29
CHGA-202ENST00000334654 C10orf107Q8IVU9 208 aa16.89■□□□□ 0.29
CHGA-202ENST00000334654 MECRQ9BV79 373 aa16.89■□□□□ 0.29
CHGA-202ENST00000334654 C1QTNF3Q9BXJ4 246 aa16.89■□□□□ 0.29
CHGA-202ENST00000334654 SLC32A1Q9H598 525 aa16.89■□□□□ 0.29
CHGA-202ENST00000334654 CCDC177Q9NQR7 707 aaPredicted RBP16.89■□□□□ 0.29
CHGA-202ENST00000334654 POMT2Q9UKY4 750 aa16.89■□□□□ 0.29
CHGA-202ENST00000334654 SH2B3Q9UQQ2 575 aa16.89■□□□□ 0.29
CHGA-202ENST00000334654 SLC22A14Q9Y267 594 aa16.89■□□□□ 0.29
CHGA-202ENST00000334654 PCDHGA1Q9Y5H4 931 aa16.89■□□□□ 0.29
CHGA-202ENST00000334654 MN1Q10571 1320 aaPredicted RBP16.89■□□□□ 0.29
CHGA-202ENST00000334654 SPAARA0A1B0GVQ0 90 aa16.88■□□□□ 0.29
CHGA-202ENST00000334654 ISM1B1AKI9 464 aa16.88■□□□□ 0.29
CHGA-202ENST00000334654 CAPN5O15484 640 aaPredicted RBP16.88■□□□□ 0.29
CHGA-202ENST00000334654 DUX1O43812 170 aa16.88■□□□□ 0.29
CHGA-202ENST00000334654 BPGMP07738 259 aa16.88■□□□□ 0.29
CHGA-202ENST00000334654 EPORP19235 508 aa16.88■□□□□ 0.29
CHGA-202ENST00000334654 IMPDH1P20839 514 aa16.88■□□□□ 0.29
CHGA-202ENST00000334654 ALDH3A1P30838 453 aa16.88■□□□□ 0.29
CHGA-202ENST00000334654 PLA2G5P39877 138 aa16.88■□□□□ 0.29
CHGA-202ENST00000334654 RSPO4Q2I0M5 234 aaPredicted RBP16.88■□□□□ 0.29
CHGA-202ENST00000334654 CAPN13Q6MZZ7 669 aaPredicted RBP16.88■□□□□ 0.29
CHGA-202ENST00000334654 LCTLQ6UWM7 567 aa16.88■□□□□ 0.29
CHGA-202ENST00000334654 RPS27LQ71UM5 84 aaKnown RBP16.88■□□□□ 0.29
CHGA-202ENST00000334654 THOC6Q86W42 341 aaKnown RBP16.88■□□□□ 0.29
CHGA-202ENST00000334654 FAM20CQ8IXL6 584 aa16.88■□□□□ 0.29
CHGA-202ENST00000334654 ANKRD42Q8N9B4 389 aa16.88■□□□□ 0.29
CHGA-202ENST00000334654 CCDC63Q8NA47 563 aa16.88■□□□□ 0.29
CHGA-202ENST00000334654 MDM1Q8TC05 714 aa16.88■□□□□ 0.29
CHGA-202ENST00000334654 MED8Q96G25 268 aa16.88■□□□□ 0.29
CHGA-202ENST00000334654 AHCYL2Q96HN2 611 aaKnown RBP16.88■□□□□ 0.29
CHGA-202ENST00000334654 TMEM237Q96Q45 408 aa16.88■□□□□ 0.29
CHGA-202ENST00000334654 ACAT2Q9BWD1 397 aa16.88■□□□□ 0.29
CHGA-202ENST00000334654 PITPNM3Q9BZ71 974 aa16.88■□□□□ 0.29
CHGA-202ENST00000334654 ACSS2Q9NR19 701 aa16.88■□□□□ 0.29
CHGA-202ENST00000334654 PDP2Q9P2J9 529 aa16.88■□□□□ 0.29
CHGA-202ENST00000334654 TAC3Q9UHF0 121 aa16.88■□□□□ 0.29
CHGA-202ENST00000334654 GSAPA4D1B5 854 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 C2orf74A8MZ97 194 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 E2F3O00716 465 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 ZW10O43264 779 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 KIF1CO43896 1103 aaKnown RBP16.87■□□□□ 0.29
CHGA-202ENST00000334654 PRAMEF4O60810 478 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 RFPL3O75679 317 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 WDR47O94967 919 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 CPNE6O95741 557 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 RPS17P08708 135 aaKnown RBP16.87■□□□□ 0.29
CHGA-202ENST00000334654 CEACAM1P13688 526 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 CCND1P24385 295 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 EEF1DP29692 281 aaKnown RBP16.87■□□□□ 0.29
CHGA-202ENST00000334654 SERPINB4P48594 390 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 DNAJB13P59910 316 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 PPP2R2AP63151 447 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 UNC50Q53HI1 259 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 HSP90B2PQ58FF3 399 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 ZNF678Q5SXM1 525 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 PRAMEF9Q5VWM5 478 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 METTL2BQ6P1Q9 378 aaKnown RBP16.87■□□□□ 0.29
CHGA-202ENST00000334654 TMEM71Q6P5X7 295 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 SPESP1Q6UW49 350 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 SLC22A9Q8IVM8 553 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 OR6Y1Q8NGX8 325 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 SLC22A18Q96BI1 424 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 FAM122AQ96E09 287 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 L3HYPDHQ96EM0 354 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 SELENOSQ9BQE4 189 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 CNOT10Q9H9A5 744 aaKnown RBP16.87■□□□□ 0.29
CHGA-202ENST00000334654 ZBTB26Q9HCK0 441 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 MLXIPLQ9NP71 852 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 SEMA5BQ9P283 1151 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 MID2Q9UJV3 735 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 PCTPQ9UKL6 214 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 CDV3Q9UKY7 258 aaKnown RBP16.87■□□□□ 0.29
CHGA-202ENST00000334654 PCDHB11Q9Y5F2 797 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 TNPO3Q9Y5L0 923 aaKnown RBP16.87■□□□□ 0.29
CHGA-202ENST00000334654 KNTC1P50748 2209 aa16.87■□□□□ 0.29
CHGA-202ENST00000334654 IGKV1-8A0A0C4DH67 115 aa16.86■□□□□ 0.29
CHGA-202ENST00000334654 K7EPI3 171 aa16.86■□□□□ 0.29
CHGA-202ENST00000334654 MATN2O00339 956 aa16.86■□□□□ 0.29
CHGA-202ENST00000334654 CCNT2O60583 730 aaKnown RBP16.86■□□□□ 0.29
CHGA-202ENST00000334654 HERVK_113P63132 956 aa16.86■□□□□ 0.29
CHGA-202ENST00000334654 PRDX1Q06830 199 aaKnown RBP16.86■□□□□ 0.29
CHGA-202ENST00000334654 PRKAA1Q13131 559 aa16.86■□□□□ 0.29
CHGA-202ENST00000334654 TSTA3Q13630 321 aaPredicted RBP16.86■□□□□ 0.29
CHGA-202ENST00000334654 CLPPQ16740 277 aaPredicted RBP16.86■□□□□ 0.29
CHGA-202ENST00000334654 SLC5A12Q1EHB4 618 aa16.86■□□□□ 0.29
CHGA-202ENST00000334654 PRAMEF13Q5VWM6 474 aa16.86■□□□□ 0.29
CHGA-202ENST00000334654 KIAA1614Q5VZ46 1190 aa16.86■□□□□ 0.29
CHGA-202ENST00000334654 CES4AQ5XG92 561 aa16.86■□□□□ 0.29
CHGA-202ENST00000334654 ICE2Q659A1 982 aa16.86■□□□□ 0.29
CHGA-202ENST00000334654 IRGCQ6NXR0 463 aa16.86■□□□□ 0.29
CHGA-202ENST00000334654 TRIM73Q86UV7 250 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms