RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 GRHL3Q8TE85 626 aa13.62□□□□□ -0.23
RPP40-201ENST00000319533 FAR1Q8WVX9 515 aa13.62□□□□□ -0.23
RPP40-201ENST00000319533 C1orf54Q8WWF1 131 aa13.62□□□□□ -0.23
RPP40-201ENST00000319533 PEX13Q92968 403 aa13.62□□□□□ -0.23
RPP40-201ENST00000319533 ZUFSPQ96AP4 578 aa13.62□□□□□ -0.23
RPP40-201ENST00000319533 TRIM56Q9BRZ2 755 aaKnown RBP13.62□□□□□ -0.23
RPP40-201ENST00000319533 LHPPQ9H008 270 aa13.62□□□□□ -0.23
RPP40-201ENST00000319533 SLC2A6Q9UGQ3 507 aa13.62□□□□□ -0.23
RPP40-201ENST00000319533 DIDO1Q9BTC0 2240 aaKnown RBP13.62□□□□□ -0.23
RPP40-201ENST00000319533 RASGRF2O14827 1237 aa13.61□□□□□ -0.23
RPP40-201ENST00000319533 ZSCAN12O43309 604 aa13.61□□□□□ -0.23
RPP40-201ENST00000319533 SRPX2O60687 465 aaPredicted RBP13.61□□□□□ -0.23
RPP40-201ENST00000319533 ADRA1DP25100 572 aa13.61□□□□□ -0.23
RPP40-201ENST00000319533 MCM3P25205 808 aa13.61□□□□□ -0.23
RPP40-201ENST00000319533 AOAHP28039 575 aa13.61□□□□□ -0.23
RPP40-201ENST00000319533 HSPA14Q0VDF9 509 aa13.61□□□□□ -0.23
RPP40-201ENST00000319533 Q0VFX4 171 aa13.61□□□□□ -0.23
RPP40-201ENST00000319533 SNX1Q13596 522 aa13.61□□□□□ -0.23
RPP40-201ENST00000319533 SEMA3AQ14563 771 aa13.61□□□□□ -0.23
RPP40-201ENST00000319533 ZNF169Q14929 603 aaPredicted RBP13.61□□□□□ -0.23
RPP40-201ENST00000319533 TLR1Q15399 786 aa13.61□□□□□ -0.23
RPP40-201ENST00000319533 OASLQ15646 514 aaKnown RBP13.61□□□□□ -0.23
RPP40-201ENST00000319533 FAM214AQ32MH5 1076 aa13.61□□□□□ -0.23
RPP40-201ENST00000319533 TUBB8Q3ZCM7 444 aa13.61□□□□□ -0.23
RPP40-201ENST00000319533 RPUSD3Q6P087 351 aaKnown RBP13.61□□□□□ -0.23
RPP40-201ENST00000319533 LMNTD1Q8N9Z9 388 aa13.61□□□□□ -0.23
RPP40-201ENST00000319533 OR11G2Q8NGC1 345 aa13.61□□□□□ -0.23
RPP40-201ENST00000319533 OR4L1Q8NH43 312 aa13.61□□□□□ -0.23
RPP40-201ENST00000319533 HMGCLL1Q8TB92 370 aa13.61□□□□□ -0.23
RPP40-201ENST00000319533 LKAAEAR1Q8TD35 194 aa13.61□□□□□ -0.23
RPP40-201ENST00000319533 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.61□□□□□ -0.23
RPP40-201ENST00000319533 VPS50Q96JG6 964 aa13.61□□□□□ -0.23
RPP40-201ENST00000319533 IL17FQ96PD4 163 aa13.61□□□□□ -0.23
RPP40-201ENST00000319533 LMF1Q96S06 567 aa13.61□□□□□ -0.23
RPP40-201ENST00000319533 TSSK1BQ9BXA7 367 aa13.61□□□□□ -0.23
RPP40-201ENST00000319533 CTSFQ9UBX1 484 aa13.61□□□□□ -0.23
RPP40-201ENST00000319533 E7EVH7 732 aa13.6□□□□□ -0.23
RPP40-201ENST00000319533 LRRTM2O43300 516 aa13.6□□□□□ -0.23
RPP40-201ENST00000319533 CEP104O60308 925 aa13.6□□□□□ -0.23
RPP40-201ENST00000319533 CTSVO60911 334 aa13.6□□□□□ -0.23
RPP40-201ENST00000319533 ALOX12BO75342 701 aa13.6□□□□□ -0.23
RPP40-201ENST00000319533 GAS8O95995 478 aa13.6□□□□□ -0.23
RPP40-201ENST00000319533 FGGP02679 453 aa13.6□□□□□ -0.23
RPP40-201ENST00000319533 APOA4P06727 396 aa13.6□□□□□ -0.23
RPP40-201ENST00000319533 PPARGP37231 505 aaPredicted RBP13.6□□□□□ -0.23
RPP40-201ENST00000319533 GRIA3P42263 894 aa13.6□□□□□ -0.23
RPP40-201ENST00000319533 CSE1LP55060 971 aaKnown RBP13.6□□□□□ -0.23
RPP40-201ENST00000319533 SF1Q15637 639 aaKnown RBP13.6□□□□□ -0.23
RPP40-201ENST00000319533 CCNG2Q16589 344 aa13.6□□□□□ -0.23
RPP40-201ENST00000319533 CROCCQ5TZA2 2017 aa13.6□□□□□ -0.23
RPP40-201ENST00000319533 IRAK1BP1Q5VVH5 260 aa13.6□□□□□ -0.23
RPP40-201ENST00000319533 NLRP9Q7RTR0 991 aa13.6□□□□□ -0.23
RPP40-201ENST00000319533 PARP9Q8IXQ6 854 aa13.6□□□□□ -0.23
RPP40-201ENST00000319533 TAB3Q8N5C8 712 aaPredicted RBP13.6□□□□□ -0.23
RPP40-201ENST00000319533 C2orf73Q8N5S3 287 aaPredicted RBP13.6□□□□□ -0.23
RPP40-201ENST00000319533 DNAAF3Q8N9W5 541 aa13.6□□□□□ -0.23
RPP40-201ENST00000319533 TTC29Q8NA56 475 aaPredicted RBP13.6□□□□□ -0.23
RPP40-201ENST00000319533 ZNF778Q96MU6 729 aa13.6□□□□□ -0.23
RPP40-201ENST00000319533 SLX1AQ9BQ83 275 aa13.6□□□□□ -0.23
RPP40-201ENST00000319533 RAB11FIP5Q9BXF6 653 aa13.6□□□□□ -0.23
RPP40-201ENST00000319533 SOX17Q9H6I2 414 aaPredicted RBP13.6□□□□□ -0.23
RPP40-201ENST00000319533 EPS8L2Q9H6S3 715 aa13.6□□□□□ -0.23
RPP40-201ENST00000319533 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.6□□□□□ -0.23
RPP40-201ENST00000319533 IGLV3-12A0A075B6K2 115 aa13.59□□□□□ -0.23
RPP40-201ENST00000319533 A0A1W2PQ72 361 aa13.59□□□□□ -0.23
RPP40-201ENST00000319533 IQCF5A8MTL0 148 aa13.59□□□□□ -0.23
RPP40-201ENST00000319533 MED26O95402 600 aa13.59□□□□□ -0.23
RPP40-201ENST00000319533 HPP00738 406 aa13.59□□□□□ -0.23
RPP40-201ENST00000319533 STSP08842 583 aa13.59□□□□□ -0.23
RPP40-201ENST00000319533 FDFT1P37268 417 aa13.59□□□□□ -0.23
RPP40-201ENST00000319533 GRIA1P42261 906 aa13.59□□□□□ -0.23
RPP40-201ENST00000319533 OR1D4P47884 311 aa13.59□□□□□ -0.23
RPP40-201ENST00000319533 CARSP49589 748 aaKnown RBP13.59□□□□□ -0.23
RPP40-201ENST00000319533 PER3P56645 1201 aa13.59□□□□□ -0.23
RPP40-201ENST00000319533 MFAP5Q13361 173 aa13.59□□□□□ -0.23
RPP40-201ENST00000319533 ZRSR2Q15696 482 aaKnown RBP13.59□□□□□ -0.23
RPP40-201ENST00000319533 RBBP7Q16576 425 aa13.59□□□□□ -0.23
RPP40-201ENST00000319533 FASTKD1Q53R41 847 aaKnown RBP13.59□□□□□ -0.23
RPP40-201ENST00000319533 WASHC2DQ5SRD0 308 aa13.59□□□□□ -0.23
RPP40-201ENST00000319533 ATG9BQ674R7 924 aa13.59□□□□□ -0.23
RPP40-201ENST00000319533 ZNF324BQ6AW86 544 aaPredicted RBP13.59□□□□□ -0.23
RPP40-201ENST00000319533 DRICH1Q6PGQ1 229 aaPredicted RBP13.59□□□□□ -0.23
RPP40-201ENST00000319533 ISLR2Q6UXK2 745 aa13.59□□□□□ -0.23
RPP40-201ENST00000319533 ZGRF1Q86YA3 2104 aa13.59□□□□□ -0.23
RPP40-201ENST00000319533 OR6P1Q8NGX9 317 aa13.59□□□□□ -0.23
RPP40-201ENST00000319533 RAD51AP1Q96B01 352 aa13.59□□□□□ -0.23
RPP40-201ENST00000319533 THOC3Q96J01 351 aaKnown RBP13.59□□□□□ -0.23
RPP40-201ENST00000319533 SELENOSQ9BQE4 189 aa13.59□□□□□ -0.23
RPP40-201ENST00000319533 ETNK1Q9HBU6 452 aa13.59□□□□□ -0.23
RPP40-201ENST00000319533 HOMER3Q9NSC5 361 aa13.59□□□□□ -0.23
RPP40-201ENST00000319533 PAK5Q9P286 719 aa13.59□□□□□ -0.23
RPP40-201ENST00000319533 SLC39A10Q9ULF5 831 aa13.59□□□□□ -0.23
RPP40-201ENST00000319533 ENTPD4Q9Y227 616 aa13.59□□□□□ -0.23
RPP40-201ENST00000319533 OSGIN2Q9Y236 505 aa13.59□□□□□ -0.23
RPP40-201ENST00000319533 JRKLQ9Y4A0 524 aa13.59□□□□□ -0.23
RPP40-201ENST00000319533 TCAF1Q9Y4C2 921 aa13.59□□□□□ -0.23
RPP40-201ENST00000319533 HYKKA2RU49 373 aa13.58□□□□□ -0.24
RPP40-201ENST00000319533 ESPNB1AK53 854 aa13.58□□□□□ -0.24
RPP40-201ENST00000319533 PRMT5O14744 637 aaPredicted RBP13.58□□□□□ -0.24
RPP40-201ENST00000319533 KLHL18O94889 574 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms