RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 NDC1Q9BTX1 674 aa8.63□□□□□ -1.03
COL6A5-202ENST00000312481 ZSWIM8A7E2V4 1837 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 KIAA0355O15063 1070 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 MFSD11O43934 449 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 ZNF182P17025 639 aaPredicted RBP8.62□□□□□ -1.03
COL6A5-202ENST00000312481 BLKP51451 505 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 RTL6Q6ICC9 239 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 ASB18Q6ZVZ8 466 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 SUSD6Q92537 303 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 RGMAQ96B86 450 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 STARD7Q9NQZ5 370 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 MYOFQ9NZM1 2061 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.62□□□□□ -1.03
COL6A5-202ENST00000312481 RPS3P23396 243 aaKnown RBP eCLIP8.62□□□□□ -1.03
COL6A5-202ENST00000312481 EPHX2P34913 555 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 GBX2P52951 348 aaPredicted RBP8.62□□□□□ -1.03
COL6A5-202ENST00000312481 RNF220Q5VTB9 566 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 PDE12Q6L8Q7 609 aaKnown RBP8.62□□□□□ -1.03
COL6A5-202ENST00000312481 ANKRD26P1Q6NSI1 321 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 RPTNQ6XPR3 784 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 CFAP206Q8IYR0 622 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 SGCDQ92629 289 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 DPAGT1Q9H3H5 408 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 FAIMQ9NVQ4 179 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 A0A0G2JLL6 359 aaPredicted RBP8.62□□□□□ -1.03
COL6A5-202ENST00000312481 CAPN14A8MX76 684 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 FAAHO00519 579 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 NFATC1O95644 943 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 IFNA6P05013 189 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 FEN1P39748 380 aaKnown RBP8.62□□□□□ -1.03
COL6A5-202ENST00000312481 RGS8P57771 180 aaPredicted RBP8.62□□□□□ -1.03
COL6A5-202ENST00000312481 TAZQ16635 292 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 TMEM35AQ53FP2 167 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 RAB41Q5JT25 222 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 PRRT2Q7Z6L0 340 aaPredicted RBP8.62□□□□□ -1.03
COL6A5-202ENST00000312481 SERPINA11Q86U17 422 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 SLC44A3Q8N4M1 653 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 DNAJA4Q8WW22 397 aaPredicted RBP8.62□□□□□ -1.03
COL6A5-202ENST00000312481 PMM1Q92871 262 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 SUSD3Q96L08 255 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 HS6ST2Q96MM7 605 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 GORASP2Q9H8Y8 452 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 TRMT13Q9NUP7 481 aaKnown RBP8.62□□□□□ -1.03
COL6A5-202ENST00000312481 SCP2D1Q9UJQ7 156 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 PPM1BO75688 479 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 ANXA3P12429 323 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 HSDL2Q6YN16 418 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 SLC35F5Q8WV83 523 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 DDX1Q92499 740 aaKnown RBP8.62□□□□□ -1.03
COL6A5-202ENST00000312481 SEMA6AQ9H2E6 1030 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 COQ10BQ9H8M1 238 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 ZDHHC3Q9NYG2 299 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 RAB19A4D1S5 217 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 MOXD2PA6NHM9 499 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 RHPN2P1A8MT19 583 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 ACSL4O60488 711 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 SLC35G6P0C7Q6 338 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 SLC2A2P11168 524 aaPredicted RBP8.62□□□□□ -1.03
COL6A5-202ENST00000312481 SNAPC1Q16533 368 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 BLOC1S3Q6QNY0 202 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 SATL1Q86VE3 508 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 ZSWIM9Q86XI8 627 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 GALNT12Q8IXK2 581 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 KIAA1143Q96AT1 154 aaPredicted RBP8.62□□□□□ -1.03
COL6A5-202ENST00000312481 SPIN1Q9Y657 262 aaPredicted RBP8.62□□□□□ -1.03
COL6A5-202ENST00000312481 NCF1BA6NI72 391 aaPredicted RBP8.62□□□□□ -1.03
COL6A5-202ENST00000312481 NCF1CA8MVU1 366 aaPredicted RBP8.62□□□□□ -1.03
COL6A5-202ENST00000312481 C22orf31O95567 290 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 BDNFP23560 247 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 RYKP34925 604 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 RASSF6Q6ZTQ3 369 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 KIF18BQ86Y91 864 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 UMODL1-AS1Q8N2C9 162 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 ZNF597Q96LX8 424 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 LBHD1Q9BQE6 289 aaPredicted RBP8.62□□□□□ -1.03
COL6A5-202ENST00000312481 GON7Q9BXV9 100 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 RPF2Q9H7B2 306 aaKnown RBP8.62□□□□□ -1.03
COL6A5-202ENST00000312481 ACOT13Q9NPJ3 140 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 LYARQ9NX58 379 aaKnown RBP8.62□□□□□ -1.03
COL6A5-202ENST00000312481 ARHGEF17Q96PE2 2063 aaPredicted RBP8.62□□□□□ -1.03
COL6A5-202ENST00000312481 H3BM21 787 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 ECM1Q16610 540 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 USP30Q70CQ3 517 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 FAM20CQ8IXL6 584 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 PNLDC1Q8NA58 520 aaKnown RBP8.62□□□□□ -1.03
COL6A5-202ENST00000312481 OR8J1Q8NGP2 316 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 IPPKQ9H8X2 491 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 KLHL1Q9NR64 748 aa8.62□□□□□ -1.03
COL6A5-202ENST00000312481 CNOT6Q9ULM6 557 aaKnown RBP8.62□□□□□ -1.03
COL6A5-202ENST00000312481 FABP12A6NFH5 140 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 CDH13P55290 713 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 ACTBP60709 375 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 ACTG1P63261 375 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 ZNF169Q14929 603 aaPredicted RBP8.61□□□□□ -1.03
COL6A5-202ENST00000312481 EXOC2Q96KP1 924 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 LGR4Q9BXB1 951 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 POLR3HQ9Y535 204 aaPredicted RBP8.61□□□□□ -1.03
COL6A5-202ENST00000312481 BNIP3LO60238 219 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 SLC5A3P53794 718 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 RNASE11Q8TAA1 199 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms