RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 PHF24Q9UPV7 400 aa13.62□□□□□ -0.23
PRKCB-201ENST00000303531 CLEC12AQ5QGZ9 265 aa13.62□□□□□ -0.23
PRKCB-201ENST00000303531 TPGS2Q68CL5 300 aa13.62□□□□□ -0.23
PRKCB-201ENST00000303531 ERI1Q8IV48 349 aaKnown RBP13.62□□□□□ -0.23
PRKCB-201ENST00000303531 C1orf52Q8N6N3 182 aaKnown RBP13.62□□□□□ -0.23
PRKCB-201ENST00000303531 OR4F6Q8NGB9 312 aa13.62□□□□□ -0.23
PRKCB-201ENST00000303531 MGME1Q9BQP7 344 aa13.62□□□□□ -0.23
PRKCB-201ENST00000303531 EFCAB11Q9BUY7 163 aa13.62□□□□□ -0.23
PRKCB-201ENST00000303531 SMOC2Q9H3U7 446 aa13.62□□□□□ -0.23
PRKCB-201ENST00000303531 FNIP2Q9P278 1114 aa13.62□□□□□ -0.23
PRKCB-201ENST00000303531 KCNQ1P51787 676 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 PPP1R8Q12972 351 aaKnown RBP13.61□□□□□ -0.23
PRKCB-201ENST00000303531 COLEC12Q5KU26 742 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 KIAA1161Q6NSJ0 714 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 RPS27LQ71UM5 84 aaKnown RBP13.61□□□□□ -0.23
PRKCB-201ENST00000303531 LINGO2Q7L985 606 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 RAB11FIP5Q9BXF6 653 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 TCF7L1Q9HCS4 588 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 CACNA1FO60840 1977 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 REM1O75628 298 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 AHCYP23526 432 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 TMEM44Q2T9K0 475 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 ZBED5Q49AG3 693 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 SPIN4Q56A73 249 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 CEP68Q76N32 757 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 GOLGA7Q7Z5G4 137 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 IQCF2Q8IXL9 164 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 OR6K6Q8NGW6 343 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 RIPOR3Q96MK2 946 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 MAGEE1Q9HCI5 957 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 TUBA8Q9NY65 449 aaPredicted RBP13.61□□□□□ -0.23
PRKCB-201ENST00000303531 CDH7Q9ULB5 785 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 RHPN2P1A8MT19 583 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 DBIP07108 87 aaKnown RBP13.61□□□□□ -0.23
PRKCB-201ENST00000303531 ACADLP28330 430 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 CSTF2P33240 577 aaKnown RBP eCLIP13.61□□□□□ -0.23
PRKCB-201ENST00000303531 MC1RQ01726 317 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 PRSS58Q8IYP2 241 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 IL4I1Q96RQ9 567 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 PEBP4Q96S96 227 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 FARSBQ9NSD9 589 aaKnown RBP13.61□□□□□ -0.23
PRKCB-201ENST00000303531 KAT6AQ92794 2004 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 INHAP05111 366 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 FUT4P22083 530 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 FOXM1Q08050 763 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 GALNT2Q10471 571 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 PLEKHG6Q3KR16 790 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 OR2T5Q6IEZ7 315 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 OSTM1Q86WC4 334 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 STX12Q86Y82 276 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 OR2T29Q8NH02 315 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 YIPF1Q9Y548 306 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 KCTD3Q9Y597 815 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 SPEF2Q9C093 1822 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 PSKH1P11801 424 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 VBP1P61758 197 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 ZNF613Q6PF04 617 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 ADGRG6Q86SQ4 1221 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 PQLC3Q8N755 202 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 RELTQ969Z4 430 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 GAL3ST1Q99999 423 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 TTYH1Q9H313 450 aaPredicted RBP13.61□□□□□ -0.23
PRKCB-201ENST00000303531 ELAC1Q9H777 363 aaKnown RBP13.61□□□□□ -0.23
PRKCB-201ENST00000303531 COPS7AQ9UBW8 275 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 ACVR2AP27037 513 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 LRRC32Q14392 662 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 GHDCQ8N2G8 530 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 NXPE1Q8N323 547 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 NLGN2Q8NFZ4 835 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 OR2L5Q8NG80 312 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 ITM2CQ9NQX7 267 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 KLK1P06870 262 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 PRAMEF14Q5SWL7 426 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 PRAMEF13Q5VWM6 474 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 TIFABQ6ZNK6 161 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 SLC38A3Q99624 504 aa13.61□□□□□ -0.23
PRKCB-201ENST00000303531 TRIM3O75382 744 aaPredicted RBP13.6□□□□□ -0.23
PRKCB-201ENST00000303531 CLDN7O95471 211 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 ACP5P13686 325 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 GGT5P36269 586 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 HSD17B2P37059 387 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 PPIGQ13427 754 aaKnown RBP eCLIP13.6□□□□□ -0.23
PRKCB-201ENST00000303531 DUOXA1Q1HG43 343 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 IGDCC3Q8IVU1 814 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 GEMIN6Q8WXD5 167 aaKnown RBP13.6□□□□□ -0.23
PRKCB-201ENST00000303531 NKD1Q969G9 470 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 PAK6Q9NQU5 681 aaPredicted RBP13.6□□□□□ -0.23
PRKCB-201ENST00000303531 FKBP7Q9Y680 259 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 TLR4O00206 839 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 HMGB3O15347 200 aaKnown RBP13.6□□□□□ -0.23
PRKCB-201ENST00000303531 SEMA3DO95025 777 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 FESP07332 822 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 MLLT6P55198 1093 aaPredicted RBP13.6□□□□□ -0.23
PRKCB-201ENST00000303531 CSTF1Q05048 431 aaKnown RBP13.6□□□□□ -0.23
PRKCB-201ENST00000303531 CTU1Q7Z7A3 348 aaKnown RBP13.6□□□□□ -0.23
PRKCB-201ENST00000303531 TTLQ8NG68 377 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 CAMK1GQ96NX5 476 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 GDAP2Q9NXN4 497 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 ACTR3BQ9P1U1 418 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 P2RX2Q9UBL9 471 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms