RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 TBC1D10AQ9BXI6 508 aa8.55□□□□□ -1.04
VPREB1-201ENST00000302273 C1QTNF3Q9BXJ4 246 aa8.55□□□□□ -1.04
VPREB1-201ENST00000302273 FAM117AQ9C073 453 aa8.55□□□□□ -1.04
VPREB1-201ENST00000302273 NRSN2Q9GZP1 204 aa8.55□□□□□ -1.04
VPREB1-201ENST00000302273 SEMA6CQ9H3T2 930 aa8.55□□□□□ -1.04
VPREB1-201ENST00000302273 EHD1Q9H4M9 534 aa8.55□□□□□ -1.04
VPREB1-201ENST00000302273 CCDC177Q9NQR7 707 aaPredicted RBP8.55□□□□□ -1.04
VPREB1-201ENST00000302273 ACTR10Q9NZ32 417 aa8.55□□□□□ -1.04
VPREB1-201ENST00000302273 PTBP2Q9UKA9 531 aaKnown RBP8.55□□□□□ -1.04
VPREB1-201ENST00000302273 ADAMTS6Q9UKP5 1117 aa8.55□□□□□ -1.04
VPREB1-201ENST00000302273 BTRCQ9Y297 605 aa8.55□□□□□ -1.04
VPREB1-201ENST00000302273 ARID1BQ8NFD5 2236 aaPredicted RBP8.54□□□□□ -1.04
VPREB1-201ENST00000302273 TPRP12270 2363 aaKnown RBP8.54□□□□□ -1.04
VPREB1-201ENST00000302273 CCDC187A0A096LP49 1063 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 IGHV5-10-1A0A0J9YXX1 117 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 CDC7O00311 574 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 COPEO14579 308 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 TM9SF1O15321 606 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 UGDHO60701 494 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 KATNA1O75449 491 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 STK16O75716 305 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 SNUPNO95149 360 aaKnown RBP8.54□□□□□ -1.04
VPREB1-201ENST00000302273 PYGBP11216 843 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 MYF5P13349 255 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 MTHFD2P13995 350 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 NELFEP18615 380 aaKnown RBP8.54□□□□□ -1.04
VPREB1-201ENST00000302273 GNAZP19086 355 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 NR1D1P20393 614 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 CXCR2P25025 360 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 CMPK1P30085 196 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 CSTF2P33240 577 aaKnown RBP eCLIP8.54□□□□□ -1.04
VPREB1-201ENST00000302273 RPA3P35244 121 aaPredicted RBP8.54□□□□□ -1.04
VPREB1-201ENST00000302273 PRKAA2P54646 552 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 HNRNPH2P55795 449 aaKnown RBP8.54□□□□□ -1.04
VPREB1-201ENST00000302273 RAB15P59190 212 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 GNGT1P63211 74 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 SHC2P98077 582 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 ACY1Q03154 408 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 CFHR1Q03591 330 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 ASPHQ12797 758 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 SF1Q15637 639 aaKnown RBP8.54□□□□□ -1.04
VPREB1-201ENST00000302273 TECRLQ5HYJ1 363 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 MANEAQ5SRI9 462 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 C10orf62Q5T681 223 aaPredicted RBP8.54□□□□□ -1.04
VPREB1-201ENST00000302273 HES3Q5TGS1 186 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 IRGCQ6NXR0 463 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 DHRS13Q6UX07 377 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 ZNF574Q6ZN55 896 aaPredicted RBP8.54□□□□□ -1.04
VPREB1-201ENST00000302273 LRRC70Q7Z2Q7 622 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 CYP4X1Q8N118 509 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 TMEM151AQ8N4L1 468 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 CHCHD4Q8N4Q1 142 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 TBC1D19Q8N5T2 526 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 ARFGAP2Q8N6H7 521 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 BANPQ8N9N5 519 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 LINC01555Q8NAE3 123 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 ABHD11Q8NFV4 315 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 OR2L3Q8NG85 312 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 WDR36Q8NI36 951 aaKnown RBP8.54□□□□□ -1.04
VPREB1-201ENST00000302273 UBTD2Q8WUN7 234 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 KCTD4Q8WVF5 259 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 PTERQ96BW5 349 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 THAP11Q96EK4 314 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 TEFMQ96QE5 360 aaKnown RBP8.54□□□□□ -1.04
VPREB1-201ENST00000302273 EGFL8Q99944 293 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 SARGQ9BW04 601 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 ASPSCR1Q9BZE9 553 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 IQCGQ9H095 443 aaKnown RBP8.54□□□□□ -1.04
VPREB1-201ENST00000302273 ALG9Q9H6U8 611 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 PDE7BQ9NP56 450 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 FBXO8Q9NRD0 319 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 TMEM184CQ9NVA4 438 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 STK38LQ9Y2H1 464 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 NEUROG3Q9Y4Z2 214 aa8.54□□□□□ -1.04
VPREB1-201ENST00000302273 ASCC3Q8N3C0 2202 aaKnown RBP8.54□□□□□ -1.04
VPREB1-201ENST00000302273 CHD8Q9HCK8 2581 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 KCNE1BA0A087WTH5 132 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 PRAMEF33A0A0G2JMD5 474 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 A0A0J9YY10 115 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 A0A1W2PPM1 405 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 A0A1W2PPV9 198 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 MED19A0JLT2 244 aaPredicted RBP8.53□□□□□ -1.04
VPREB1-201ENST00000302273 GSAPA4D1B5 854 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 NPEPPSL1A6NEC2 478 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 SRRM3A6NNA2 597 aaPredicted RBP8.53□□□□□ -1.04
VPREB1-201ENST00000302273 ISM1B1AKI9 464 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 TXNDC9O14530 226 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 GIPC1O14908 333 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 SMIM24O75264 130 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 DXOO77932 396 aaKnown RBP8.53□□□□□ -1.04
VPREB1-201ENST00000302273 HOXB3P14651 431 aaPredicted RBP8.53□□□□□ -1.04
VPREB1-201ENST00000302273 EZRP15311 586 aaKnown RBP8.53□□□□□ -1.04
VPREB1-201ENST00000302273 UGT2B7P16662 529 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 NPPBP16860 134 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 TYRP1P17643 537 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 POLR2CP19387 275 aaPredicted RBP8.53□□□□□ -1.04
VPREB1-201ENST00000302273 CDH3P22223 829 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 ATP5F1P24539 256 aaPredicted RBP8.53□□□□□ -1.04
VPREB1-201ENST00000302273 HPDP32754 393 aaPredicted RBP8.53□□□□□ -1.04
VPREB1-201ENST00000302273 CSF2RBP32927 897 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms