RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 MMP28Q9H239 520 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 POPDC3Q9HBV1 291 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 ANKHQ9HCJ1 492 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 SNTG1Q9NSN8 517 aa11.13□□□□□ -0.63
TRUB1-201ENST00000298746 SIP14410 1827 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 OR2A25A4D2G3 310 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 OR6C70A6NIJ9 312 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 TMCC2O75069 709 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 EPN2O95208 641 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 GLUD1P00367 558 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 RETP07949 1114 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 HOXD8P13378 290 aaPredicted RBP11.12□□□□□ -0.63
TRUB1-201ENST00000298746 EPB42P16452 691 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 PTPN2P17706 415 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 RPS14P62263 151 aaKnown RBP11.12□□□□□ -0.63
TRUB1-201ENST00000298746 TIAL1Q01085 375 aaKnown RBP eCLIP11.12□□□□□ -0.63
TRUB1-201ENST00000298746 ST3GAL4Q11206 333 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 USP39Q53GS9 565 aaKnown RBP11.12□□□□□ -0.63
TRUB1-201ENST00000298746 PDZK1Q5T2W1 519 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 NXNL2Q5VZ03 156 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 TMPRSS11AQ6ZMR5 421 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 FAM217AQ8IXS0 508 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 ARRDC2Q8TBH0 407 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 FCGR1BQ92637 280 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 HSH2DQ96JZ2 352 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 NEDD4LQ96PU5 975 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 CIPCQ9C0C6 399 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 SLC6A13Q9NSD5 602 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 TAS2R16Q9NYV7 291 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 CRNNQ9UBG3 495 aaPredicted RBP11.12□□□□□ -0.63
TRUB1-201ENST00000298746 COL4A5P29400 1685 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 SMIM30A4D0T7 59 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 CLDN24A6NM45 220 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 HHLA1C9JL84 531 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 SLC28A1O00337 649 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 MMP2P08253 660 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 ITGAMP11215 1152 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 CD6P30203 668 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 IFNA8P32881 189 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 HNF4AP41235 474 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 CAMK2BQ13554 666 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 TSTA3Q13630 321 aaPredicted RBP11.12□□□□□ -0.63
TRUB1-201ENST00000298746 IHHQ14623 411 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 PROX2Q3B8N5 592 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 SMUG1Q53HV7 270 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 RUNDC3AQ59EK9 446 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 LAIR1Q6GTX8 287 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 SYCE2Q6PIF2 218 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 ELMOD2Q8IZ81 293 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 CLDN19Q8N6F1 224 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 WDR36Q8NI36 951 aaKnown RBP11.12□□□□□ -0.63
TRUB1-201ENST00000298746 PIK3R3Q92569 461 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 DPF3Q92784 378 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 IGSF8Q969P0 613 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 TMCO6Q96DC7 493 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 CLIP3Q96DZ5 547 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 EBPLQ9BY08 206 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 FAM126AQ9BYI3 521 aaPredicted RBP11.12□□□□□ -0.63
TRUB1-201ENST00000298746 TM9SF3Q9HD45 589 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 RAD18Q9NS91 495 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 NUDT4Q9NZJ9 180 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 NUFIP1Q9UHK0 495 aaKnown RBP11.12□□□□□ -0.63
TRUB1-201ENST00000298746 MYO10Q9HD67 2058 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 A0A1W2PQ67 120 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 LOC730098B7Z3J9 87 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 MUSKO15146 869 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 KMOO15229 486 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 SH3BP5O60239 455 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 ERN1O75460 977 aaKnown RBP11.12□□□□□ -0.63
TRUB1-201ENST00000298746 CCNDBP1O95273 360 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 OPN1SWP03999 348 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 CXCR2P25025 360 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 VLDLRP98155 873 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 STARD3Q14849 445 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 CLPPQ16740 277 aaPredicted RBP11.12□□□□□ -0.63
TRUB1-201ENST00000298746 LRRC26Q2I0M4 334 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 FAM131AQ6UXB0 335 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 LRRTM3Q86VH5 581 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 NLGN4XQ8N0W4 816 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 TAGAPQ8N103 731 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 GLB1L3Q8NCI6 653 aaPredicted RBP11.12□□□□□ -0.63
TRUB1-201ENST00000298746 GPRC5AQ8NFJ5 357 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 ENKURQ8TC29 256 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 BHMTQ93088 406 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 CCDC115Q96NT0 180 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 MIOSQ9NXC5 875 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 SPASTQ9UBP0 616 aa11.12□□□□□ -0.63
TRUB1-201ENST00000298746 BNIP3LO60238 219 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 TNFRSF21O75509 655 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 CNMDO75829 334 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 BCKDHAP12694 445 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 RRM2P31350 389 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 BEX3Q00994 111 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 KEAP1Q14145 624 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 TIMM50Q3ZCQ8 353 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 MS4A13Q5J8X5 152 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 UBXN11Q5T124 520 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 ERAP2Q6P179 960 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 CDADC1Q9BWV3 514 aa11.11□□□□□ -0.63
TRUB1-201ENST00000298746 ABCB9Q9NP78 766 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms