RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 RXRGP48443 463 aa23.73■■□□□ 1.39
SPTSSA-201ENST00000298130 BCAP31P51572 246 aa23.73■■□□□ 1.39
SPTSSA-201ENST00000298130 VLDLRP98155 873 aa23.73■■□□□ 1.39
SPTSSA-201ENST00000298130 CDKN3Q16667 212 aa23.73■■□□□ 1.39
SPTSSA-201ENST00000298130 Q6ZPB1 254 aaPredicted RBP23.73■■□□□ 1.39
SPTSSA-201ENST00000298130 ADAMTS19Q8TE59 1207 aa23.73■■□□□ 1.39
SPTSSA-201ENST00000298130 RPL3LQ92901 407 aaKnown RBP23.73■■□□□ 1.39
SPTSSA-201ENST00000298130 ASIC4Q96FT7 647 aa23.73■■□□□ 1.39
SPTSSA-201ENST00000298130 KCNH6Q9H252 994 aa23.73■■□□□ 1.39
SPTSSA-201ENST00000298130 ZNF451Q9Y4E5 1061 aa23.73■■□□□ 1.39
SPTSSA-201ENST00000298130 FKBP9O95302 570 aa23.73■■□□□ 1.39
SPTSSA-201ENST00000298130 RETP07949 1114 aa23.73■■□□□ 1.39
SPTSSA-201ENST00000298130 SLC10A3P09131 477 aa23.73■■□□□ 1.39
SPTSSA-201ENST00000298130 NCS1P62166 190 aa23.73■■□□□ 1.39
SPTSSA-201ENST00000298130 MTA1Q13330 715 aa23.73■■□□□ 1.39
SPTSSA-201ENST00000298130 LRRC66Q68CR7 880 aa23.73■■□□□ 1.39
SPTSSA-201ENST00000298130 SLC8B1Q6J4K2 584 aa23.73■■□□□ 1.39
SPTSSA-201ENST00000298130 FKBP9P1Q75LS8 142 aa23.73■■□□□ 1.39
SPTSSA-201ENST00000298130 MAGED4Q96JG8 741 aa23.73■■□□□ 1.39
SPTSSA-201ENST00000298130 PDP1Q9P0J1 537 aaPredicted RBP23.73■■□□□ 1.39
SPTSSA-201ENST00000298130 YIPF1Q9Y548 306 aa23.73■■□□□ 1.39
SPTSSA-201ENST00000298130 CPQQ9Y646 472 aa23.73■■□□□ 1.39
SPTSSA-201ENST00000298130 FAM220BPB1ANY3 271 aa23.72■■□□□ 1.39
SPTSSA-201ENST00000298130 SPAM1P38567 509 aa23.72■■□□□ 1.39
SPTSSA-201ENST00000298130 ALDH7A1P49419 539 aaKnown RBP23.72■■□□□ 1.39
SPTSSA-201ENST00000298130 CLDN8P56748 225 aa23.72■■□□□ 1.39
SPTSSA-201ENST00000298130 GBX1Q14549 363 aa23.72■■□□□ 1.39
SPTSSA-201ENST00000298130 ATG9BQ674R7 924 aa23.72■■□□□ 1.39
SPTSSA-201ENST00000298130 ADNP2Q6IQ32 1131 aa23.72■■□□□ 1.39
SPTSSA-201ENST00000298130 TMEM150AQ86TG1 271 aa23.72■■□□□ 1.39
SPTSSA-201ENST00000298130 BEND7Q8N7W2 519 aaPredicted RBP23.72■■□□□ 1.39
SPTSSA-201ENST00000298130 REXO4Q9GZR2 422 aaKnown RBP23.72■■□□□ 1.39
SPTSSA-201ENST00000298130 AASDHPPTQ9NRN7 309 aa23.72■■□□□ 1.39
SPTSSA-201ENST00000298130 DAPK2Q9UIK4 370 aa23.72■■□□□ 1.39
SPTSSA-201ENST00000298130 NUDT7P0C024 238 aa23.72■■□□□ 1.39
SPTSSA-201ENST00000298130 FUT4P22083 530 aa23.72■■□□□ 1.39
SPTSSA-201ENST00000298130 CD70P32970 193 aa23.72■■□□□ 1.39
SPTSSA-201ENST00000298130 HALP42357 657 aa23.72■■□□□ 1.39
SPTSSA-201ENST00000298130 ZNF648Q5T619 568 aaPredicted RBP23.72■■□□□ 1.39
SPTSSA-201ENST00000298130 DNAJB7Q7Z6W7 309 aaPredicted RBP23.72■■□□□ 1.39
SPTSSA-201ENST00000298130 PLPP6Q8IY26 295 aa23.72■■□□□ 1.39
SPTSSA-201ENST00000298130 PIK3C3Q8NEB9 887 aa23.72■■□□□ 1.39
SPTSSA-201ENST00000298130 TPD52L3Q96J77 140 aa23.72■■□□□ 1.39
SPTSSA-201ENST00000298130 RDH12Q96NR8 316 aa23.72■■□□□ 1.39
SPTSSA-201ENST00000298130 MTERF1Q99551 399 aaKnown RBP23.72■■□□□ 1.39
SPTSSA-201ENST00000298130 SLC32A1Q9H598 525 aa23.72■■□□□ 1.39
SPTSSA-201ENST00000298130 THG1LQ9NWX6 298 aaKnown RBP23.72■■□□□ 1.39
SPTSSA-201ENST00000298130 MTRRQ9UBK8 725 aa23.72■■□□□ 1.39
SPTSSA-201ENST00000298130 INTS6Q9UL03 887 aaKnown RBP23.72■■□□□ 1.39
SPTSSA-201ENST00000298130 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.71■■□□□ 1.39
SPTSSA-201ENST00000298130 ERN1O75460 977 aaKnown RBP23.71■■□□□ 1.39
SPTSSA-201ENST00000298130 SELPP16109 830 aa23.71■■□□□ 1.39
SPTSSA-201ENST00000298130 CRTC1Q6UUV9 634 aa23.71■■□□□ 1.39
SPTSSA-201ENST00000298130 NPAS4Q8IUM7 802 aa23.71■■□□□ 1.39
SPTSSA-201ENST00000298130 CHPT1Q8WUD6 406 aa23.71■■□□□ 1.39
SPTSSA-201ENST00000298130 RORBQ92753 470 aa23.71■■□□□ 1.39
SPTSSA-201ENST00000298130 PANX1Q96RD7 426 aa23.71■■□□□ 1.39
SPTSSA-201ENST00000298130 AMBNQ9NP70 447 aa23.71■■□□□ 1.39
SPTSSA-201ENST00000298130 A0A096LPI6 279 aa23.71■■□□□ 1.39
SPTSSA-201ENST00000298130 GJA1P17302 382 aa23.71■■□□□ 1.39
SPTSSA-201ENST00000298130 ENGP17813 658 aa23.71■■□□□ 1.39
SPTSSA-201ENST00000298130 MASP1P48740 699 aa23.71■■□□□ 1.39
SPTSSA-201ENST00000298130 IFITM3Q01628 133 aa23.71■■□□□ 1.39
SPTSSA-201ENST00000298130 ELAVL2Q12926 359 aaKnown RBP23.71■■□□□ 1.39
SPTSSA-201ENST00000298130 PAGE2BQ5JRK9 111 aa23.71■■□□□ 1.39
SPTSSA-201ENST00000298130 TMEM165Q9HC07 324 aa23.71■■□□□ 1.39
SPTSSA-201ENST00000298130 ZNF334Q9HCZ1 680 aaPredicted RBP23.71■■□□□ 1.39
SPTSSA-201ENST00000298130 POLE4Q9NR33 117 aa23.71■■□□□ 1.39
SPTSSA-201ENST00000298130 PCDHGA10Q9Y5H3 936 aa23.71■■□□□ 1.39
SPTSSA-201ENST00000298130 YY2O15391 372 aa23.7■■□□□ 1.39
SPTSSA-201ENST00000298130 MT-ND2P03891 347 aa23.7■■□□□ 1.39
SPTSSA-201ENST00000298130 IMPDH2P12268 514 aa23.7■■□□□ 1.39
SPTSSA-201ENST00000298130 CD97P48960 835 aa23.7■■□□□ 1.39
SPTSSA-201ENST00000298130 CCL23P55773 120 aa23.7■■□□□ 1.39
SPTSSA-201ENST00000298130 AP1S1P61966 158 aa23.7■■□□□ 1.39
SPTSSA-201ENST00000298130 SMARCB1Q12824 385 aa23.7■■□□□ 1.39
SPTSSA-201ENST00000298130 EPS8Q12929 822 aa23.7■■□□□ 1.39
SPTSSA-201ENST00000298130 TRIM16LQ309B1 348 aa23.7■■□□□ 1.39
SPTSSA-201ENST00000298130 MACC1Q6ZN28 852 aa23.7■■□□□ 1.39
SPTSSA-201ENST00000298130 ZNF540Q8NDQ6 660 aa23.7■■□□□ 1.39
SPTSSA-201ENST00000298130 P2RY13Q9BPV8 354 aa23.7■■□□□ 1.39
SPTSSA-201ENST00000298130 SMG9Q9H0W8 520 aaKnown RBP23.7■■□□□ 1.39
SPTSSA-201ENST00000298130 SIRT5Q9NXA8 310 aa23.7■■□□□ 1.39
SPTSSA-201ENST00000298130 GMPPBQ9Y5P6 360 aa23.7■■□□□ 1.39
SPTSSA-201ENST00000298130 PRRG1O14668 218 aa23.7■■□□□ 1.38
SPTSSA-201ENST00000298130 ADAM23O75077 832 aa23.7■■□□□ 1.38
SPTSSA-201ENST00000298130 UGT2B11O75310 529 aa23.7■■□□□ 1.38
SPTSSA-201ENST00000298130 RECQL5O94762 991 aaPredicted RBP23.7■■□□□ 1.38
SPTSSA-201ENST00000298130 NADKO95544 446 aaPredicted RBP23.7■■□□□ 1.38
SPTSSA-201ENST00000298130 CYP4F8P98187 520 aa23.7■■□□□ 1.38
SPTSSA-201ENST00000298130 DNASE1L3Q13609 305 aa23.7■■□□□ 1.38
SPTSSA-201ENST00000298130 MAPK11Q15759 364 aa23.7■■□□□ 1.38
SPTSSA-201ENST00000298130 PDE12Q6L8Q7 609 aaKnown RBP23.7■■□□□ 1.38
SPTSSA-201ENST00000298130 DEFB128Q7Z7B8 93 aa23.7■■□□□ 1.38
SPTSSA-201ENST00000298130 HIPK1Q86Z02 1210 aa23.7■■□□□ 1.38
SPTSSA-201ENST00000298130 C2orf15Q8WU43 125 aaKnown RBP23.7■■□□□ 1.38
SPTSSA-201ENST00000298130 MAL2Q969L2 176 aa23.7■■□□□ 1.38
SPTSSA-201ENST00000298130 NEURL2Q9BR09 285 aa23.7■■□□□ 1.38
SPTSSA-201ENST00000298130 HTATIP2Q9BUP3 242 aa23.7■■□□□ 1.38
SPTSSA-201ENST00000298130 TRBV5-4A0A0C4DH59 114 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms