RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 ZCWPW2A0A1B0GU75 182 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 FAM234BA2RU67 622 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 CHURC1-FNTBB4DL54 471 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 BHMG1C9JSJ3 638 aaPredicted RBP13.13□□□□□ -0.31
HPS3-201ENST00000296051 SCN2BO60939 215 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 STK16O75716 305 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 OXTRP30559 389 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 ALDH3A2P51648 485 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 CSNK2BP67870 215 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 INCA1Q0VD86 236 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 PTGR1Q14914 329 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 SPANXN4Q5MJ08 99 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 UBXN11Q5T124 520 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 KRT74Q7RTS7 529 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 HDDC2Q7Z4H3 204 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 HS3ST5Q8IZT8 346 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 CRYBG2Q8N1P7 616 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 SGIP1Q9BQI5 828 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 EHD1Q9H4M9 534 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 NKIRAS2Q9NYR9 191 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 MYH9P35579 1960 aaKnown RBP13.13□□□□□ -0.31
HPS3-201ENST00000296051 TNFRSF11BO00300 401 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 PDE9AO76083 593 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 FABP3P05413 133 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 CYBAP13498 195 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 ACP5P13686 325 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 MAGEA8P43361 318 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 EEFSECP57772 596 aaKnown RBP13.12□□□□□ -0.31
HPS3-201ENST00000296051 TIGD6Q17RP2 521 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 DEF8Q6ZN54 512 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 AARSD1Q9BTE6 412 aaKnown RBP13.12□□□□□ -0.31
HPS3-201ENST00000296051 BEX2Q9BXY8 128 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 OR2AG1Q9H205 316 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 MICAL3Q7RTP6 2002 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 SEMA3DO95025 777 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 CYP11A1P05108 521 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 OR2B6P58173 313 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 ZNF678Q5SXM1 525 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 RNF44Q7L0R7 432 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 COMMD2Q86X83 199 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 ARMC8Q8IUR7 673 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 DEPDC4Q8N2C3 294 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 IL4I1Q96RQ9 567 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 KIFC1Q9BW19 673 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 TTLL2Q9BWV7 592 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 CLEC4MQ9H2X3 399 aaPredicted RBP13.12□□□□□ -0.31
HPS3-201ENST00000296051 SP140LQ9H930 580 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 SPATA6Q9NWH7 488 aaPredicted RBP13.12□□□□□ -0.31
HPS3-201ENST00000296051 CCDC88AQ3V6T2 1871 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 B4DGG1 531 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 KRT33AO76009 404 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 KCNE1P15382 129 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 USP39Q53GS9 565 aaKnown RBP13.12□□□□□ -0.31
HPS3-201ENST00000296051 TMEM203Q969S6 136 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 CDKN2AIPNLQ96HQ2 116 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 FUNDC2Q9BWH2 189 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 MCOLN1Q9GZU1 580 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 MUC13Q9H3R2 512 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 CTPS2Q9NRF8 586 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 TBCCD1Q9NVR7 557 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 ZNF232Q9UNY5 417 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 PCDHGB5Q9Y5G0 923 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 PCP4L1A6NKN8 68 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 GTPBP1O00178 669 aaKnown RBP13.12□□□□□ -0.31
HPS3-201ENST00000296051 TEX28O15482 410 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 SCELO95171 688 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 TRBC1P01850 177 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 CAPN3P20807 821 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 BMPR1AP36894 532 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 GSTM5P46439 218 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 CARD16Q5EG05 197 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 SIRPB2Q5JXA9 342 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 C6orf141Q5SZD1 244 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 TMEM164Q5U3C3 297 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 NEK5Q6P3R8 708 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 TMPRSS11AQ6ZMR5 421 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 CACTIN-AS1Q8N1I8 211 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 SSR3Q9UNL2 185 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 DNAJC15Q9Y5T4 150 aa13.12□□□□□ -0.31
HPS3-201ENST00000296051 SNTNA6NMZ2 147 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 HAT1O14929 419 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 AXIN1O15169 862 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 DFNA5O60443 496 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 TPST2O60704 377 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 SLC6A2P23975 617 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 CTSOP43234 321 aaPredicted RBP13.11□□□□□ -0.31
HPS3-201ENST00000296051 FAM91A1Q658Y4 838 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 C16orf62Q7Z3J2 963 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 MTERF1Q99551 399 aaKnown RBP13.11□□□□□ -0.31
HPS3-201ENST00000296051 GDAP2Q9NXN4 497 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 MARCH4Q9P2E8 410 aaPredicted RBP13.11□□□□□ -0.31
HPS3-201ENST00000296051 GOLGB1Q14789 3259 aaKnown RBP13.11□□□□□ -0.31
HPS3-201ENST00000296051 SLC22A1O15245 554 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 INMTO95050 263 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 OPRL1P41146 370 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 CLDN10P78369 228 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 CD83Q01151 205 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 NDUFA5Q16718 116 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 CERS6Q6ZMG9 384 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 GALNT10Q86SR1 603 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms