RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 CCND1P24385 295 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 HNF4AP41235 474 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 TPMTP51580 245 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 NAE1Q13564 534 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 ARHGAP19Q14CB8 494 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 RPS6KA2Q15349 733 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 NR6A1Q15406 480 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 SNCBQ16143 134 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 LPAL2Q16609 132 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 C6orf163Q5TEZ5 329 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 LAIR1Q6GTX8 287 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 CAPN13Q6MZZ7 669 aaPredicted RBP14.89□□□□□ -0.03
COPS3-201ENST00000268717 KIAA1324Q6UXG2 1013 aaKnown RBP14.89□□□□□ -0.03
COPS3-201ENST00000268717 CEP68Q76N32 757 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 FUNDC1Q8IVP5 155 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 DEFB107AQ8IZN7 70 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 DSELQ8IZU8 1212 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 FNDC5Q8NAU1 212 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 PHC3Q8NDX5 983 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 RAD51AP1Q96B01 352 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 PYCR2Q96C36 320 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 SERPINI1Q99574 410 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 SGPP1Q9BX95 441 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 ATG10Q9H0Y0 220 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 DENND2DQ9H6A0 471 aaPredicted RBP14.89□□□□□ -0.03
COPS3-201ENST00000268717 INTS7Q9NVH2 962 aaKnown RBP14.89□□□□□ -0.03
COPS3-201ENST00000268717 NOP53Q9NZM5 478 aaKnown RBP14.89□□□□□ -0.03
COPS3-201ENST00000268717 CCDC167Q9P0B6 97 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 SLC23A2Q9UGH3 650 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 ZNF490Q9ULM2 529 aaPredicted RBP14.89□□□□□ -0.03
COPS3-201ENST00000268717 SPTBN4Q9H254 2564 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 A8MUI8 341 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 IFRD1O00458 451 aaPredicted RBP14.88□□□□□ -0.03
COPS3-201ENST00000268717 AIM2O14862 343 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 NRP2O60462 931 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 RSL1D1O76021 490 aaKnown RBP14.88□□□□□ -0.03
COPS3-201ENST00000268717 CEACAM5P06731 702 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 ERGP11308 486 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 PPP2CBP62714 309 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 PPP2CAP67775 309 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 TBL3Q12788 808 aaKnown RBP14.88□□□□□ -0.03
COPS3-201ENST00000268717 ART3Q13508 389 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 PLA2G4EQ3MJ16 856 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 CCSMST1Q4G0I0 132 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 GRHL2Q6ISB3 625 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 PAOXQ6QHF9 649 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 ZNF480Q8WV37 535 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 KLK6Q92876 244 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 ROPN1LQ96C74 230 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 METTL2AQ96IZ6 378 aaKnown RBP14.88□□□□□ -0.03
COPS3-201ENST00000268717 TPSD1Q9BZJ3 242 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 EHD1Q9H4M9 534 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 ELOVL6Q9H5J4 265 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 NCDNQ9UBB6 729 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 GIMAP2Q9UG22 337 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 SLC7A8Q9UHI5 535 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 NDUFAF1Q9Y375 327 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 KCNE2Q9Y6J6 123 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 GON4LQ3T8J9 2241 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 ZNF839A8K0R7 811 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 H0YIV9 168 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 CLGNO14967 610 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 LATO43561 262 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 HSD3B1P14060 373 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 GNAZP19086 355 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 ITPKAP23677 461 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 HSD3B2P26439 372 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 GNPDA1P46926 289 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 DIO3P55073 304 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 MTTPP55157 894 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 CTBSQ01459 385 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 IRF8Q02556 426 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 CHIT1Q13231 466 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 LRP8Q14114 963 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 RCAN2Q14206 197 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 AP5B1Q2VPB7 878 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 FRG2Q64ET8 278 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 REP15Q6BDI9 236 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 CAPRIN2Q6IMN6 1127 aaKnown RBP14.88□□□□□ -0.03
COPS3-201ENST00000268717 BLOC1S3Q6QNY0 202 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 SCIMPQ6UWF3 145 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 ZFAND4Q86XD8 727 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 LRRC56Q8IYG6 542 aaPredicted RBP14.88□□□□□ -0.03
COPS3-201ENST00000268717 PCYOX1LQ8NBM8 494 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 OR5K2Q8NHB8 316 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 SETD7Q8WTS6 366 aaKnown RBP14.88□□□□□ -0.03
COPS3-201ENST00000268717 HMGB4Q8WW32 186 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 TFGQ92734 400 aaPredicted RBP14.88□□□□□ -0.03
COPS3-201ENST00000268717 WDR34Q96EX3 536 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 FRG2BQ96QU4 278 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 SPATA7Q9P0W8 599 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 ZNHIT2Q9UHR6 403 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 GMEB2Q9UKD1 530 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 ASF1AQ9Y294 204 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 TMED5Q9Y3A6 229 aa14.88□□□□□ -0.03
COPS3-201ENST00000268717 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.88□□□□□ -0.03
COPS3-201ENST00000268717 CEP192Q8TEP8 1941 aa14.87□□□□□ -0.03
COPS3-201ENST00000268717 DMXL1Q9Y485 3027 aa14.87□□□□□ -0.03
COPS3-201ENST00000268717 CEP250Q9BV73 2442 aa14.87□□□□□ -0.03
COPS3-201ENST00000268717 FPGTO14772 594 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms