RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 CCDC71Q8IV32 467 aaPredicted RBP16.36■□□□□ 0.21
SQLE-201ENST00000265896 CLIP4Q8N3C7 705 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 DBF4BQ8NFT6 615 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 OR5K1Q8NHB7 308 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 REXO5Q96IC2 774 aaKnown RBP16.36■□□□□ 0.21
SQLE-201ENST00000265896 ZNF347Q96SE7 839 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 MARCH5Q9NX47 278 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 DNMT3BQ9UBC3 853 aaKnown RBP16.36■□□□□ 0.21
SQLE-201ENST00000265896 ANKRD36A6QL64 1941 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 STK16O75716 305 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 IDH2P48735 452 aaKnown RBP16.35■□□□□ 0.21
SQLE-201ENST00000265896 CDH18Q13634 790 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 USP39Q53GS9 565 aaKnown RBP16.35■□□□□ 0.21
SQLE-201ENST00000265896 P2RY8Q86VZ1 359 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 ZBTB2Q8N680 514 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 TTC29Q8NA56 475 aaPredicted RBP16.35■□□□□ 0.21
SQLE-201ENST00000265896 LEMD2Q8NC56 503 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 PIK3C3Q8NEB9 887 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 GPR156Q8NFN8 814 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 CLMPQ9H6B4 373 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 GIN1Q9NXP7 522 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 POU2F3Q9UKI9 436 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 SLC6A14Q9UN76 642 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 ZNF840PA6NDX5 716 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 YY2O15391 372 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 ADAMTS4O75173 837 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 SEC24AO95486 1093 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 JUNBP17275 347 aaPredicted RBP16.35■□□□□ 0.21
SQLE-201ENST00000265896 GJA1P17302 382 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 ENGP17813 658 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 EPORP19235 508 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 RGS4P49798 205 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 TPTEP56180 551 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 SMAD3P84022 425 aaKnown RBP16.35■□□□□ 0.21
SQLE-201ENST00000265896 CLCA4Q14CN2 919 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 NIPAL1Q6NVV3 410 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 NCEH1Q6PIU2 408 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 HORMAD1Q86X24 394 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 CHPFQ8IZ52 775 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 NLGN4XQ8N0W4 816 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 PEX13Q92968 403 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 MYO19Q96H55 970 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 REXO4Q9GZR2 422 aaKnown RBP16.35■□□□□ 0.21
SQLE-201ENST00000265896 MAGEE1Q9HCI5 957 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 AASDHPPTQ9NRN7 309 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 TESMINQ9Y4I5 508 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 TNPO3Q9Y5L0 923 aaKnown RBP16.35■□□□□ 0.21
SQLE-201ENST00000265896 PRAMEF4O60810 478 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 CLDN11O75508 207 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 CD36P16671 472 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 SDC1P18827 310 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 KRT20P35900 424 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 FXNQ16595 210 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 HECTD3Q5T447 861 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 PRAMEF9Q5VWM5 478 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 TERB1Q8NA31 727 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 SMG9Q9H0W8 520 aaKnown RBP16.35■□□□□ 0.21
SQLE-201ENST00000265896 TMEM184CQ9NVA4 438 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 LHX3Q9UBR4 397 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 BTBD3Q9Y2F9 522 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 NINQ8N4C6 2090 aa16.35■□□□□ 0.21
SQLE-201ENST00000265896 IQCA1LA6NCM1 817 aa16.34■□□□□ 0.21
SQLE-201ENST00000265896 PTCHD3Q3KNS1 767 aa16.34■□□□□ 0.21
SQLE-201ENST00000265896 TXNDC8Q6A555 127 aa16.34■□□□□ 0.21
SQLE-201ENST00000265896 GPR149Q86SP6 731 aa16.34■□□□□ 0.21
SQLE-201ENST00000265896 PLD3Q8IV08 490 aa16.34■□□□□ 0.21
SQLE-201ENST00000265896 HS6ST3Q8IZP7 471 aa16.34■□□□□ 0.21
SQLE-201ENST00000265896 GPR26Q8NDV2 337 aa16.34■□□□□ 0.21
SQLE-201ENST00000265896 FBXO22Q8NEZ5 403 aa16.34■□□□□ 0.21
SQLE-201ENST00000265896 YTHDF1Q9BYJ9 559 aaKnown RBP16.34■□□□□ 0.21
SQLE-201ENST00000265896 RUBCNLQ9H714 662 aa16.34■□□□□ 0.21
SQLE-201ENST00000265896 HMG20AQ9NP66 347 aa16.34■□□□□ 0.21
SQLE-201ENST00000265896 VWA8A3KMH1 1905 aa16.34■□□□□ 0.21
SQLE-201ENST00000265896 TMEM221A6NGB7 291 aa16.34■□□□□ 0.21
SQLE-201ENST00000265896 TBKBP1A7MCY6 615 aa16.34■□□□□ 0.21
SQLE-201ENST00000265896 HMGCLP35914 325 aa16.34■□□□□ 0.21
SQLE-201ENST00000265896 CTSOP43234 321 aaPredicted RBP16.34■□□□□ 0.21
SQLE-201ENST00000265896 GPR17Q13304 367 aa16.34■□□□□ 0.21
SQLE-201ENST00000265896 ARL14EPQ8N8R7 260 aaPredicted RBP16.34■□□□□ 0.21
SQLE-201ENST00000265896 RAPGEFL1Q9UHV5 662 aa16.34■□□□□ 0.21
SQLE-201ENST00000265896 A0A1B0GVM2 712 aa16.33■□□□□ 0.21
SQLE-201ENST00000265896 SAP18O00422 153 aaKnown RBP16.33■□□□□ 0.21
SQLE-201ENST00000265896 PCDHGA12O60330 932 aa16.33■□□□□ 0.21
SQLE-201ENST00000265896 IL6P05231 212 aa16.33■□□□□ 0.21
SQLE-201ENST00000265896 CLK1P49759 484 aaKnown RBP16.33■□□□□ 0.21
SQLE-201ENST00000265896 NEK5Q6P3R8 708 aa16.33■□□□□ 0.21
SQLE-201ENST00000265896 SYTL1Q8IYJ3 562 aa16.33■□□□□ 0.21
SQLE-201ENST00000265896 FAM83FQ8NEG4 500 aaPredicted RBP16.33■□□□□ 0.21
SQLE-201ENST00000265896 HSH2DQ96JZ2 352 aa16.33■□□□□ 0.21
SQLE-201ENST00000265896 CPPED1Q9BRF8 314 aaPredicted RBP16.33■□□□□ 0.21
SQLE-201ENST00000265896 RERGLQ9H628 205 aa16.33■□□□□ 0.21
SQLE-201ENST00000265896 KRT84Q9NSB2 600 aa16.33■□□□□ 0.21
SQLE-201ENST00000265896 VPS9D1Q9Y2B5 631 aa16.33■□□□□ 0.21
SQLE-201ENST00000265896 TSC22D4Q9Y3Q8 395 aa16.33■□□□□ 0.21
SQLE-201ENST00000265896 SCN10AQ9Y5Y9 1956 aa16.33■□□□□ 0.2
SQLE-201ENST00000265896 GLYATL1P3A0A0U1RQE8 302 aa16.33■□□□□ 0.2
SQLE-201ENST00000265896 NPIPB15A6NHN6 443 aaPredicted RBP16.33■□□□□ 0.2
SQLE-201ENST00000265896 CLDN9O95484 217 aa16.33■□□□□ 0.2
SQLE-201ENST00000265896 CCR7P32248 378 aa16.33■□□□□ 0.2
SQLE-201ENST00000265896 LIPAP38571 399 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms