RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 ATXN10Q9UBB4 475 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 GMEB2Q9UKD1 530 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 POMPQ9Y244 141 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 ZNF99A8MXY4 864 aaPredicted RBP11.83□□□□□ -0.52
COL8A1-201ENST00000261037 TMEM150CB9EJG8 249 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 ERI3O43414 337 aaKnown RBP11.83□□□□□ -0.52
COL8A1-201ENST00000261037 ZNF20P17024 532 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 AP2S1P53680 142 aaPredicted RBP11.83□□□□□ -0.52
COL8A1-201ENST00000261037 DLG1Q12959 904 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 PROKR2Q8NFJ6 384 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 OR10G2Q8NGC3 310 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 KXD1Q9BQD3 176 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 CCM2Q9BSQ5 444 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 GTPBP2Q9BX10 602 aaKnown RBP11.83□□□□□ -0.52
COL8A1-201ENST00000261037 ZDHHC3Q9NYG2 299 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 HS3ST4Q9Y661 456 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 NRXN3Q9Y4C0 1643 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 PI15O43692 258 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 RPP14O95059 124 aaKnown RBP11.83□□□□□ -0.52
COL8A1-201ENST00000261037 PRAMEF12O95522 483 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 PLGP00747 810 aaPredicted RBP11.83□□□□□ -0.52
COL8A1-201ENST00000261037 GBAP04062 536 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 MPIP34949 423 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 SLC6A9P48067 706 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 TYSND1Q2T9J0 566 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 PRAMEF14Q5SWL7 426 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 PRAMEF13Q5VWM6 474 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 TDRPQ86YL5 185 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 OR8H1Q8NGG4 311 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 OR10Q1Q8NGQ4 319 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 CXorf21Q9HAI6 301 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 SLC22A14Q9Y267 594 aa11.83□□□□□ -0.52
COL8A1-201ENST00000261037 MMP20O60882 483 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 CLPXO76031 633 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 IMPDH1P20839 514 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 EIF1AXP47813 144 aaKnown RBP11.82□□□□□ -0.52
COL8A1-201ENST00000261037 GATMP50440 423 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 PLGLB1Q02325 96 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 SLC2A7Q6PXP3 512 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 MBOAT1Q6ZNC8 495 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 FCRL5Q96RD9 977 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 TWNKQ96RR1 684 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 AKTIPQ9H8T0 292 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 ZDHHC4Q9NPG8 344 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 ZNF224Q9NZL3 707 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 MRPS17Q9Y2R5 130 aaKnown RBP11.82□□□□□ -0.52
COL8A1-201ENST00000261037 TLL2Q9Y6L7 1015 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 CLCA3PQ9Y6N3 262 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 CLCNKAP51800 687 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 DGKQP52824 942 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 FRMD7Q6ZUT3 714 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 CCDC54Q8NEL0 328 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 NFKBIDQ8NI38 313 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 SLC22A17Q8WUG5 538 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 DCAKDQ8WVC6 231 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 ZNF347Q96SE7 839 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 KCTD3Q9Y597 815 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 FABP12A6NFH5 140 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 EI24O14681 340 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 CXCR1P25024 350 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 RNF144AP50876 292 aaPredicted RBP11.82□□□□□ -0.52
COL8A1-201ENST00000261037 DSTNP60981 165 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 OC90Q02509 493 aaPredicted RBP11.82□□□□□ -0.52
COL8A1-201ENST00000261037 GRM2Q14416 872 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 C1orf52Q8N6N3 182 aaKnown RBP11.82□□□□□ -0.52
COL8A1-201ENST00000261037 ZSWIM3Q96MP5 696 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 COL21A1Q96P44 957 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 MINDY3Q9H8M7 445 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 DNAJB9Q9UBS3 223 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 WNT6Q9Y6F9 365 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 ROBO1Q9Y6N7 1651 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 IGKV6D-41A0A0C4DH26 115 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 SLC35F4A4IF30 521 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 AGPSO00116 658 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 EIF1AYO14602 144 aaKnown RBP11.82□□□□□ -0.52
COL8A1-201ENST00000261037 TNFP01375 233 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 JUNP05412 331 aaKnown RBP11.82□□□□□ -0.52
COL8A1-201ENST00000261037 LINGO3P0C6S8 592 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 PSKH1P11801 424 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 ARHGAP1Q07960 439 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 RFTN1Q14699 578 aaPredicted RBP11.82□□□□□ -0.52
COL8A1-201ENST00000261037 ODF4Q2M2E3 257 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 ANKRD26P1Q6NSI1 321 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 NUDT13Q86X67 352 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 IFNL1Q8IU54 200 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 SPERTQ8NA61 448 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 TBL1XR1Q9BZK7 514 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 GDAP2Q9NXN4 497 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 CCDC59Q9P031 241 aaKnown RBP11.82□□□□□ -0.52
COL8A1-201ENST00000261037 SPIN1Q9Y657 262 aaPredicted RBP11.82□□□□□ -0.52
COL8A1-201ENST00000261037 CACNA1FO60840 1977 aa11.82□□□□□ -0.52
COL8A1-201ENST00000261037 CYB5AP00167 134 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 ATP1B2P14415 290 aaPredicted RBP11.81□□□□□ -0.52
COL8A1-201ENST00000261037 EDNRAP25101 427 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 NRG3P56975 720 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 AP3S2P59780 193 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 ERVK-8P63133 956 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 SCN1BQ07699 218 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 TEAD2Q15562 447 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 USP43Q70EL4 1123 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms