RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 SIPA1Q96FS4 1042 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 PDXPQ96GD0 296 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 AHCYL2Q96HN2 611 aaKnown RBP13.3□□□□□ -0.28
GABPB1-201ENST00000220429 GTPBP2Q9BX10 602 aaKnown RBP13.3□□□□□ -0.28
GABPB1-201ENST00000220429 TNKS2Q9H2K2 1166 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 LTB4R2Q9NPC1 389 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 FAM118AQ9NWS6 357 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 CD274Q9NZQ7 290 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 KIF17Q9P2E2 1029 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 TINAGQ9UJW2 476 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 MKL2Q9ULH7 1088 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 PEX16Q9Y5Y5 336 aa13.3□□□□□ -0.28
GABPB1-201ENST00000220429 CLDN24A6NM45 220 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 NME4O00746 187 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 KATNA1O75449 491 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 MT-ND1P03886 318 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 SLC2A3P11169 496 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 CD36P16671 472 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 SPRP35270 261 aaPredicted RBP13.29□□□□□ -0.28
GABPB1-201ENST00000220429 DGKQP52824 942 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 ALDH6A1Q02252 535 aaKnown RBP13.29□□□□□ -0.28
GABPB1-201ENST00000220429 EPS8Q12929 822 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 GLYATQ6IB77 296 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 PLD6Q8N2A8 252 aaKnown RBP13.29□□□□□ -0.28
GABPB1-201ENST00000220429 ZNF555Q8NEP9 628 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 FCRL2Q96LA5 508 aaPredicted RBP13.29□□□□□ -0.28
GABPB1-201ENST00000220429 IL22Q9GZX6 179 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 ADAM28Q9UKQ2 775 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 ELF5Q9UKW6 265 aaPredicted RBP13.29□□□□□ -0.28
GABPB1-201ENST00000220429 PLXNA3P51805 1871 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 ST8SIA5O15466 376 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 TNFRSF21O75509 655 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 APOC1P02654 83 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 NMBRP28336 390 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 CCR1P32246 355 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 ETV6P41212 452 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 ERVK-8P63133 956 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 CDH17Q12864 832 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 IKZF1Q13422 519 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 CLLU1OSQ5K130 101 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 NAPEPLDQ6IQ20 393 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 KCNMB4Q86W47 210 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 PELI3Q8N2H9 469 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 ATPAF2Q8N5M1 289 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 PCSK9Q8NBP7 692 aaKnown RBP13.29□□□□□ -0.28
GABPB1-201ENST00000220429 LINC01599Q8WXQ3 324 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 SLC25A23Q9BV35 468 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 SLC39A8Q9C0K1 460 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 FAM83DQ9H4H8 585 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 OSER1Q9NX31 292 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 ERVK-18Q9QC07 812 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 MIA3Q5JRA6 1907 aa13.29□□□□□ -0.28
GABPB1-201ENST00000220429 A0A1W2PQH9 124 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 ARPC2O15144 300 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 FZD6O60353 706 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 MAFKO60675 156 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 NDUFS6O75380 124 aaKnown RBP13.28□□□□□ -0.28
GABPB1-201ENST00000220429 WDPCPO95876 746 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 MT-CYBP00156 380 aaPredicted RBP13.28□□□□□ -0.28
GABPB1-201ENST00000220429 CCT3P49368 545 aaKnown RBP13.28□□□□□ -0.28
GABPB1-201ENST00000220429 SSTP61278 116 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 MBTPS1Q14703 1052 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 SDHAF4Q5VUM1 108 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 SCN4BQ8IWT1 228 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 TRIM48Q8IWZ4 208 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 ZNF366Q8N895 744 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 PAPD5Q8NDF8 572 aaKnown RBP13.28□□□□□ -0.28
GABPB1-201ENST00000220429 ASB12Q8WXK4 309 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 YIPF5Q969M3 257 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 TRNT1Q96Q11 434 aaKnown RBP13.28□□□□□ -0.28
GABPB1-201ENST00000220429 DCLRE1CQ96SD1 692 aaKnown RBP13.28□□□□□ -0.28
GABPB1-201ENST00000220429 CAB39LQ9H9S4 337 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 RGS18Q9NS28 235 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 RNF186Q9NXI6 227 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 KPNA5O15131 536 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 XPNPEP2O43895 674 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 PGLSO95336 258 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 MOCS2O96007 188 aaPredicted RBP13.28□□□□□ -0.28
GABPB1-201ENST00000220429 CKBP12277 381 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 CD6P30203 668 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 PER3P56645 1201 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 FLI1Q01543 452 aaPredicted RBP13.28□□□□□ -0.28
GABPB1-201ENST00000220429 PCDH1Q08174 1060 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 DSC1Q08554 894 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 TEX261Q6UWH6 196 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 RBM23Q86U06 439 aaKnown RBP13.28□□□□□ -0.28
GABPB1-201ENST00000220429 ACVR1CQ8NER5 493 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 OXSMQ9NWU1 459 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 ANKRD6Q9Y2G4 727 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 LYVE1Q9Y5Y7 322 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 U3KQ87 197 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 U3KQV3 271 aa13.28□□□□□ -0.28
GABPB1-201ENST00000220429 ZFC3H1O60293 1989 aaKnown RBP13.28□□□□□ -0.28
GABPB1-201ENST00000220429 A0A0U1RQS6 177 aa13.27□□□□□ -0.28
GABPB1-201ENST00000220429 DSCR3O14972 297 aa13.27□□□□□ -0.28
GABPB1-201ENST00000220429 FGF10O15520 208 aaPredicted RBP13.27□□□□□ -0.28
GABPB1-201ENST00000220429 ALPPP05187 535 aa13.27□□□□□ -0.28
GABPB1-201ENST00000220429 HSD17B1P14061 328 aa13.27□□□□□ -0.28
GABPB1-201ENST00000220429 ITGB6P18564 788 aa13.27□□□□□ -0.28
GABPB1-201ENST00000220429 MYL9P24844 172 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms