RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Capn8Q91VA3 703 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Cstf3Q99LI7 717 aaKnown RBP9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Stx11Q9D3G5 287 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Uba7Q9DBK7 977 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Zbp1Q9QY24 411 aa9.51□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Slc25a54B1AUS6 473 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Gm4450E9Q007 373 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Gm44G3UW88 330 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Stk16O88697 305 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Etv4P28322 485 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Gbx2P48031 348 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 SqleP52019 572 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 TceancQ3US16 359 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Zc3h12aQ5D1E7 596 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Hsd3b4Q61767 373 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Jak3Q62137 1100 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Itga2Q62469 1178 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Kir3dl2Q673W2 388 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Fam167aQ6P1G6 215 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Kmt5cQ6Q783 468 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 ZfatQ7TS63 1237 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Cyp20a1Q8BKE6 462 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 MylipQ8BM54 445 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Slc49a3Q8CE47 516 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Lurap1lQ8K2P1 221 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Zcchc9Q8R1J3 271 aaKnown RBP9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Cyp4f13Q99N19 523 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Ska1Q9CPV1 254 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 2310003L06RikQ9CV82 495 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Efhc2Q9D485 750 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Tdrd6P61407 2134 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Gm6592A2AHC7 168 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 AmbnO55189 407 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Itgb1P09055 798 aaKnown RBP9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 JunbP09450 344 aaKnown RBP9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Igfbp5Q07079 271 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 CilpQ66K08 1184 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Olfr1152Q7TR34 310 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Itln1bQ80ZA0 313 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Ncs1Q8BNY6 190 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Phtf2Q8CB19 747 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Olfr691Q8VGW5 322 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Cbr4Q91VT4 236 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Fastkd2Q922E6 689 aaKnown RBP9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Dppa5aQ9CQS7 118 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 CutalQ9D1U5 156 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Trim39Q9ESN2 488 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Slc5a3Q9JKZ2 718 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Brca1P48754 1812 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Cyp2j8G3UZ38 503 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Vmn2r4K7N784 913 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Kcnk1O08581 336 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Npc1O35604 1277 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 PargO88622 969 aaKnown RBP9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Arl6O88848 186 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Gdf7P43029 461 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Kcnj9P48543 393 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Fubp3Q3TIX6 575 aaKnown RBP9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Usp39Q3TIX9 564 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Foxj1Q61660 421 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Apex2Q68G58 516 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Sec24dQ6NXL1 1032 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Ptx4Q6RUU0 478 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Olfr1036Q7TR85 310 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 DglucyQ8BH86 617 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Rnf219Q8K2Y0 722 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Kcnc4Q8R1C0 628 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 KptnQ8VCX6 430 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 RragcQ99K70 398 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Ankra2Q99PE2 312 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Tex19.2Q9D5S1 317 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Nectin1Q9JKF6 515 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Akap8lQ9R0L7 642 aaKnown RBP9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Kat6aQ8BZ21 2003 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Olfr675A0A1B0GSE1 317 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Xlr5bA2BI50 236 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Zfp992B1ASD8 573 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Hmox2O70252 315 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 MndaP0DOV1 425 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Rps17P63276 135 aaKnown RBP9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Eif2ak2Q03963 515 aaKnown RBP9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Padi2Q08642 673 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 CblbQ3TTA7 982 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Acsm3Q3UNX5 580 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Olfr381Q5SSP0 311 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Zmpste24Q80W54 475 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Hus1Q8BQY8 280 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Guf1Q8C3X4 651 aaKnown RBP9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Smco1Q8CEZ1 214 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Syn3Q8JZP2 579 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Zfp991Q8R1N3 573 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Mrpl9Q99N94 265 aaKnown RBP9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Zdhhc21Q9D270 265 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Olfr704Q9EPF6 315 aa9.5□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 PpigA2AR02 752 aaKnown RBP9.49□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Zyg11aA2BFL2 627 aa9.49□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Olfr521E9Q519 321 aa9.49□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Gm10324L7N208 604 aa9.49□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Slc22a2O70577 553 aa9.49□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Atp6v1e1P50518 226 aa9.49□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 37.6 ms