RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Faim2Q8K097 317 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 LipmQ8K2A6 422 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Olfr1090Q8VGA6 313 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Hspb11Q9D6H2 143 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Pde4dipQ80YT7 2224 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm21973F6WEZ7 68 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 MndaP0DOV1 425 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Mmp3P28862 477 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Sox2P48432 319 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Rnf19aP50636 840 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 B3gnt4Q1RLK6 350 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Hsdl1Q8BTX9 330 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Zmiz2Q8CIE2 920 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Asb15Q8VHS6 583 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Sec16bQ91XT4 1051 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Tmed9Q99KF1 235 aaKnown RBP11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 AuhQ9JLZ3 314 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 2610028H24RikG5E8K1 270 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Plpp4Q0VBU9 271 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Muc3aQ3U5A2 218 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Mfsd3Q5U419 412 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Tas2r129Q7M709 320 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Olfr1231Q7TQZ8 313 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Insig1Q8BGI3 259 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Tmem80Q9D3H0 123 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Nmrk2Q9D7C9 195 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Hmgn3Q9DCB1 99 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm27029A2A4P4 543 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Pitpnm1O35954 1243 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Bop1P97452 732 aaKnown RBP11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Spin1Q61142 262 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Q8BHB7 409 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Timmdc1Q8BUY5 285 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Dus1lQ8C2P3 475 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Bin3Q9JI08 253 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 CK137956B1AYM9 596 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Cyp2a22B2RXZ2 492 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Cyp4a14O35728 507 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Pld5Q3UNN8 536 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Zfp53Q9Z117 652 aa11.71□□□□□ -0.53
Trim56-201ENSMUST00000054384 Xpnpep3B7ZMP1 506 aaKnown RBP11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 AU018091E9PWS4 684 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 Zfr2E9Q5M4 874 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 NmbrO54799 390 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 PrnpP04925 254 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 EpycP70186 322 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 McidasQ3UZ45 379 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 Sec24dQ6NXL1 1032 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 MfrpQ8K480 584 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 Q9D979 236 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 Padi4Q9Z183 666 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 Hcn1O88704 910 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 Slc22a23Q3UHH2 689 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 Grik5Q61626 979 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 Capns2Q9D7J7 247 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 Tsc22d4Q9EQN3 387 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 Ssna1Q9JJ94 119 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 Sall1Q9ER74 1322 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gm7073E9QAS1 335 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 FaimlJ3QPY3 178 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 Fkbp7O54998 218 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gnao1P18872 354 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 Dpf3P58269 378 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 Dnaja1P63037 397 aaKnown RBP11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 Tbx5P70326 518 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 Slc6a3Q61327 619 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 Vat1Q62465 406 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 Taf10Q8K0H5 218 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 Izumo1Q9D9J7 397 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 Yipf7Q9JIM5 254 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 Chrna6Q9R0W9 494 aa11.71□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cntnap2Q9CPW0 1332 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Pdia2D3Z6P0 527 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gm14496K7N5U4 849 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 PrkacbP68181 351 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Pyroxd2Q3U4I7 581 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 ADGRF3Q58Y75 991 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Clec2gQ9D676 269 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 IcmtQ9EQK7 283 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 SqorQ9R112 450 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Olfr1366A0A1W2P740 328 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Sema3aO08665 772 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Meis2P97367 477 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 PgrQ00175 926 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Inppl1Q6P549 1257 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Slc34a3Q80SU6 601 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Tns4Q8BZ33 696 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gin1Q8K259 518 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Rbm48Q8K2X2 371 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Itm2cQ91VK4 269 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Pcdha6Q91Y14 946 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Nrif1Q923B3 828 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Tomm20lQ9D4V6 152 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Rexo2Q9D8S4 237 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Fam124aD3Z5V4 536 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Scarf2P59222 833 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Slc39a12Q5FWH7 689 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cyp2d40Q6P8N9 338 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Pgm2Q7TSV4 620 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Commd7Q8BG94 200 aa11.7□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 46.9 ms