RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Ap5b1Q3TAP4 876 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Cdh12Q5RJH3 794 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 PigaQ64323 485 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Lats2Q7TSJ6 1042 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Mettl22Q8R1C6 393 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ppp2r2dQ925E7 453 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 MmadhcQ99LS1 296 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Raver1Q9CW46 748 aaKnown RBP10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Exosc1Q9DAA6 195 aaKnown RBP10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ehd3Q9QXY6 535 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Uba2Q9Z1F9 638 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Smim17A0A504 109 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Zfp600A2A7V0 737 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gm595A2AF73 655 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Lcn5A2AJB7 192 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Kcnk1O08581 336 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Mtnd3P03899 115 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Tuba3aP05214 450 aaKnown RBP10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Alox5P48999 674 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Sema4aQ62178 760 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Wnt8aQ64527 354 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Maml1Q6T264 1020 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Dsg4Q7TMD7 1041 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Olfr1036Q7TR85 310 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ca12Q8CI85 354 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ccm2Q8K2Y9 453 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Slc29a4Q8R139 528 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gstt3Q99L20 241 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Krt81Q9ERE2 481 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 AgkQ9ESW4 421 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Tdp2Q9JJX7 370 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Sned1Q70E20 1403 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Adh6aE9Q5Z6 375 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Olfr738L7N1X7 311 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 AldoaP05064 364 aaKnown RBP10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 AdprhP54923 362 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Rps3P62908 243 aaKnown RBP10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Itih2Q61703 946 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Zpbp2Q6X786 326 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Olfr834Q7TRG8 312 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Olfr538Q7TRT5 310 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ppp1r1cQ8BKK4 108 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Fam110bQ8C739 366 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Lsm14aQ8K2F8 462 aaKnown RBP10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Fmo2Q8K2I3 535 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Prokr2Q8K458 381 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Micu1Q8VCX5 477 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Zdhhc21Q9D270 265 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gbe1Q9D6Y9 702 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ltn1Q6A009 1767 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Lrp5Q91VN0 1614 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ltbp4Q8K4G1 1666 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ms4a4aA0A087WRT7 236 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Spin2gA0A0N4SW15 236 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gm14781A2A9Q9 366 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 4930579F01RikE9Q3L6 325 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Spin2eJ3QNQ0 234 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gp1baO35930 734 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Slc2a7P0C6A1 513 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Znf800Q0VEE6 662 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 MedagQ14BA6 303 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 GstcdQ5RL51 634 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Taf1cQ6PDZ2 836 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Fastkd5Q7TMV3 762 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Wfikkn2Q7TQN3 571 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Fbxl4Q8BH70 621 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 DglucyQ8BH86 617 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Clec4a3Q8JZX6 237 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Slc45a3Q8K0H7 553 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ugt2b1Q8R084 529 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gstm4Q8R5I6 218 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Olfr1276Q8VF40 312 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Slc15a4Q91W98 574 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 B3galt6Q91Z92 325 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Dnajc18Q9CZJ9 357 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Adck1Q9D0L4 525 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Inpp5eQ9JII1 647 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Nipa2Q9JJC8 359 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gde1Q9JL56 331 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Rad18Q9QXK2 509 aaKnown RBP10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Acot2Q9QYR9 453 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Padi4Q9Z183 666 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gm45713A0A1B0GS68 446 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Armc4B2RY50 1037 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Pate3B3GLJ3 98 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 AU018091E9PWS4 684 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Vmn2r116E9Q6I0 856 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gm17555F6U8B9 371 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gm8444F6XS56 118 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gm16506F7ANP4 213 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ifnar2O35664 513 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Wnt6P22727 364 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Smad5P97454 465 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Mthfd1lQ3V3R1 977 aaKnown RBP10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 2900092C05RikQ5I0V9 184 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Tas2r104Q7M723 302 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ppwd1Q8CEC6 646 aaKnown RBP10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Kiaa2013Q91X21 634 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Unc50Q9CQ61 259 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 HhatlQ9D1G3 503 aa10.07□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 67.4 ms