RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 As3mtQ91WU5 376 aa16.46■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Grip1Q925T6 1127 aa16.46■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Bcl7aQ9CXE2 210 aa16.46■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Tex264E9Q137 309 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Sult3a2G5E904 293 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 PigfO09101 219 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 NsmafO35242 920 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Angpt2O35608 496 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Anxa3O35639 323 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Stc1O55183 247 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 ChadO55226 358 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 AprtP08030 180 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Colec11Q3SXB8 272 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Fam189bQ5HZJ5 669 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Cdh24Q6PFX6 781 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Slc22a12Q8CFZ5 553 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Olfr665Q8VG79 316 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Chil4Q91Z98 402 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Pop5Q9DB28 169 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Pin1Q9QUR7 165 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 DnpepQ9Z2W0 473 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Rhox2dW4VSN9 191 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Esp31A8R0W3 114 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Mybpc3O70468 1270 aaKnown RBP16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Nr5a2P45448 560 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Sult2a1P52843 285 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Dmrtc1bQ2PMX6 267 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Krtcap2Q5RL79 136 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Scgb2b2Q6UGQ3 114 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Ccdc126Q8BIS8 140 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 4932411N23RikQ8C0S0 470 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Cdc16Q8R349 620 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Nif3l1Q9EQ80 376 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Scamp3O35609 349 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Hoxc8P09025 242 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Esr1P19785 599 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Pdha2P35487 391 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Sox2P48432 319 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Krt80Q0VBK2 452 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 KrtdapQ3V2T4 102 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Pabpc2Q62029 628 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 RbfaQ6P3B9 350 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Tas2r125Q7M710 311 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Tas2r106Q7M724 308 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Olfr1015Q7TR94 312 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Mtmr12Q80TA6 747 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Efr3aQ8BG67 819 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 BfarQ8R079 450 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 NtsQ9D3P9 169 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 SgshQ9EQ08 502 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Aldh6a1Q9EQ20 535 aaKnown RBP16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 CenpkQ9ESN5 271 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Twf2Q9Z0P5 349 aaKnown RBP16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Arih2Q9Z1K6 492 aa16.45■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Znf518bB2RRE4 1077 aa16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Tex16F6WNY1 1150 aa16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Ackr2O08707 378 aa16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Tcea1P10711 301 aaKnown RBP16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 MylpfP97457 169 aa16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 IspdQ5RJG7 447 aa16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 MyorgQ69ZQ1 716 aa16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Slitrk5Q810B7 957 aa16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Katnb1Q8BG40 658 aa16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Slco2b1Q8BXB6 683 aa16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Fam221bQ8C627 487 aa16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Scara5Q8K299 491 aa16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 NrarpQ91ZA8 114 aa16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Npffr2Q924H0 417 aa16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 AmnQ99JB7 458 aaKnown RBP16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Cldn19Q9ET38 224 aa16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Ehd3Q9QXY6 535 aa16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Hpse2B2RY83 592 aa16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Olfr544E9PX47 334 aa16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Klrb1bP27812 223 aa16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Klrb1cP27814 223 aa16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Csnk2bP67871 215 aaKnown RBP16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Apoa1Q00623 264 aa16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Nfe2Q07279 373 aa16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 GiprQ0P543 460 aa16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 MocosQ14CH1 862 aa16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Oas1dQ8VI95 361 aa16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Cmc1Q9CPZ8 106 aa16.44■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Gbp4A4UUI3 631 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Hsd17b10O08756 261 aaKnown RBP16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Npc1O35604 1277 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Cyp21P03940 487 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Scg5P12961 212 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 AcadvlP50544 656 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Dnaja1P63037 397 aaKnown RBP16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Nr1h4Q60641 488 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Olfr20Q7TRX9 314 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Guf1Q8C3X4 651 aaKnown RBP16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 NifkQ91VE6 317 aaKnown RBP16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Ubqln5Q9D4I8 510 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Ap3m1Q9JKC8 418 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Fzd9Q9R216 592 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Supt3B0QZW4 406 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Gm14744B1AVU4 173 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Gm17615E9Q9P2 165 aa16.43■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Kcnj5P48545 419 aa16.43■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms