RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Grin2cQ01098 1239 aa18.28■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Padi2Q08642 673 aa18.28■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 DtlQ3TLR7 729 aa18.28■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Sfmbt2Q5DTW2 938 aa18.28■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Olfr1197Q7TR13 314 aa18.28■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Olfr1196Q7TR14 314 aa18.28■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Slc2a12Q8BFW9 622 aa18.28■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Gpr171Q8BG55 319 aa18.28■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Rcn3Q8BH97 328 aa18.28■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Olfr1019Q8VGS3 310 aa18.28■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Det1Q9D0A0 550 aa18.28■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Pus10Q9D3U0 527 aa18.28■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Sh3glb1Q9JK48 365 aa18.28■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Foxe3Q9QY14 288 aa18.28■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 AicdaQ9WVE0 198 aa18.28■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Gm10800D3Z496 220 aa18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Hnf1bP27889 558 aa18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Mbl1P39039 239 aa18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Sox2P48432 319 aa18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Eef1a2P62631 463 aaKnown RBP18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Bpifa6Q0VGU8 367 aa18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Shcbp1lQ3TTP0 639 aa18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Cpsf6Q6NVF9 551 aaKnown RBP18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Irak2Q8CFA1 622 aa18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Acad9Q8JZN5 625 aaKnown RBP18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Ergic3Q9CQE7 383 aa18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Fam13cQ9DBR2 601 aa18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 MylkQ6PDN3 1941 aaKnown RBP18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Nlrc5C3VPR6 1915 aa18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Gm10718D3Z1I7 227 aa18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Vmn2r94E9PZK8 818 aa18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 E030030I06RikJ3QML9 246 aa18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Dnajb5O89114 348 aa18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Surf2P09926 257 aaKnown RBP18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Cntn5P68500 1098 aa18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Mmp11Q02853 492 aa18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Xrra1Q3U3V8 786 aa18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Itga7Q61738 1179 aa18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Ifit3Q64345 403 aa18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 CilpQ66K08 1184 aa18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Cnih3Q6ZWS4 160 aa18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Olfr437Q8VEV1 310 aa18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Olfr691Q8VGW5 322 aa18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 SharpinQ91WA6 380 aa18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 Metap1dQ9CPW9 335 aa18.27■□□□□ 0.52
Shkbp1-201ENSMUST00000003857 P01631 113 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 MaxP28574 160 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 CkbQ04447 381 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 InhbbQ04999 411 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Hdgfl2Q3UMU9 669 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Rnf43Q5NCP0 784 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Foxj1Q61660 421 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Ckmt2Q6P8J7 419 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Tmem202Q80W35 275 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 ToporsQ80Z37 1033 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Dnajc27Q8CFP6 273 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Rnf219Q8K2Y0 722 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 AmotQ8VHG2 1126 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Pcdhb21Q91V48 774 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 DgkgQ91WG7 788 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Tnfaip8Q921Z5 198 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 PglsQ9CQ60 257 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 CroccQ8CJ40 2009 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Ifi213D3Z5G0 586 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Gpr50O88495 591 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 OstnP61364 130 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 NfycP70353 335 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 PhexP70669 749 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Parp8Q3UD82 852 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Clca4bQ3UW98 925 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Cdk15Q3V3A1 433 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Ints6Q6PCM2 883 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Npas4Q8BGD7 802 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Far1Q922J9 515 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Cyp2c55Q9D816 490 aa18.26■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Gm13040A2A8C4 496 aa18.25■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Tmem236A2ARJ3 344 aa18.25■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Gm13101A2ASJ0 481 aa18.25■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Rad21l1A2AU37 552 aa18.25■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Zfp952B0V2W4 504 aa18.25■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Gm13119B1ARV5 481 aa18.25■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Gm6569D3YTM9 175 aa18.25■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Izumo4D3Z690 227 aa18.25■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Npc1O35604 1277 aa18.25■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Slc32a1O35633 525 aa18.25■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Cd93O89103 644 aa18.25■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Slc2a2P14246 523 aa18.25■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 TshrP47750 764 aa18.25■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Gm7030Q0WXH6 285 aa18.25■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Tstd2Q3U269 495 aa18.25■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Bcl2l1Q64373 233 aa18.25■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Olfr1085Q7TR64 313 aa18.25■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Znf668Q8K2R5 619 aa18.25■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 PolbQ8K409 335 aa18.25■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Gabarapl1Q8R3R8 117 aa18.25■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Eml3Q8VC03 897 aa18.25■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 AassQ99K67 926 aa18.25■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Trim12aQ99PQ1 284 aa18.25■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 2610042L04RikQ9D073 150 aa18.25■□□□□ 0.51
Shkbp1-201ENSMUST00000003857 Vsig1Q9D2J4 407 aa18.25■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 26.2 ms