RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 ZNF517Q6ZMY9 492 aaPredicted RBP14.48□□□□□ -0.09
PHGDH-231ENST00000641939 MAATS1Q7Z4T9 603 aa14.48□□□□□ -0.09
PHGDH-231ENST00000641939 FAM20CQ8IXL6 584 aa14.48□□□□□ -0.09
PHGDH-231ENST00000641939 DSELQ8IZU8 1212 aa14.48□□□□□ -0.09
PHGDH-231ENST00000641939 DNAJC22Q8N4W6 341 aa14.48□□□□□ -0.09
PHGDH-231ENST00000641939 BBOF1Q8ND07 529 aa14.48□□□□□ -0.09
PHGDH-231ENST00000641939 OR9A1PQ8NGU1 263 aa14.48□□□□□ -0.09
PHGDH-231ENST00000641939 HMGCLL1Q8TB92 370 aa14.48□□□□□ -0.09
PHGDH-231ENST00000641939 DENND1AQ8TEH3 1009 aa14.48□□□□□ -0.09
PHGDH-231ENST00000641939 MR1Q95460 341 aa14.48□□□□□ -0.09
PHGDH-231ENST00000641939 MED8Q96G25 268 aa14.48□□□□□ -0.09
PHGDH-231ENST00000641939 WDR83Q9BRX9 315 aaKnown RBP14.48□□□□□ -0.09
PHGDH-231ENST00000641939 GPR87Q9BY21 358 aa14.48□□□□□ -0.09
PHGDH-231ENST00000641939 SLC7A5P2Q9GIP4 190 aa14.48□□□□□ -0.09
PHGDH-231ENST00000641939 PPANQ9NQ55 473 aaKnown RBP14.48□□□□□ -0.09
PHGDH-231ENST00000641939 FAM114A2Q9NRY5 505 aa14.48□□□□□ -0.09
PHGDH-231ENST00000641939 INTS7Q9NVH2 962 aaKnown RBP14.48□□□□□ -0.09
PHGDH-231ENST00000641939 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.48□□□□□ -0.09
PHGDH-231ENST00000641939 KLHL20Q9Y2M5 609 aa14.48□□□□□ -0.09
PHGDH-231ENST00000641939 MEN1O00255 615 aa14.47□□□□□ -0.09
PHGDH-231ENST00000641939 ZNF749O43361 778 aa14.47□□□□□ -0.09
PHGDH-231ENST00000641939 HCRTR1O43613 425 aa14.47□□□□□ -0.09
PHGDH-231ENST00000641939 PRICKLE3O43900 615 aaPredicted RBP14.47□□□□□ -0.09
PHGDH-231ENST00000641939 CREG1O75629 220 aa14.47□□□□□ -0.09
PHGDH-231ENST00000641939 C1QL1O75973 258 aa14.47□□□□□ -0.09
PHGDH-231ENST00000641939 OR2B3O76000 313 aa14.47□□□□□ -0.09
PHGDH-231ENST00000641939 AHSGP02765 367 aa14.47□□□□□ -0.09
PHGDH-231ENST00000641939 HBQ1P09105 142 aa14.47□□□□□ -0.09
PHGDH-231ENST00000641939 MPC1LP0DKB6 136 aa14.47□□□□□ -0.09
PHGDH-231ENST00000641939 CBSLP0DN79 551 aa14.47□□□□□ -0.09
PHGDH-231ENST00000641939 GABRB3P28472 473 aa14.47□□□□□ -0.09
PHGDH-231ENST00000641939 OAS2P29728 719 aaKnown RBP14.47□□□□□ -0.09
PHGDH-231ENST00000641939 RORAP35398 523 aa14.47□□□□□ -0.09
PHGDH-231ENST00000641939 CBSP35520 551 aa14.47□□□□□ -0.09
PHGDH-231ENST00000641939 RPS15P62841 145 aaKnown RBP14.47□□□□□ -0.09
PHGDH-231ENST00000641939 MRPS25P82663 173 aaKnown RBP14.47□□□□□ -0.09
PHGDH-231ENST00000641939 C2orf54Q08AI8 447 aa14.47□□□□□ -0.09
PHGDH-231ENST00000641939 CYP2A13Q16696 494 aa14.47□□□□□ -0.09
PHGDH-231ENST00000641939 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.47□□□□□ -0.09
PHGDH-231ENST00000641939 TEDDM1Q5T9Z0 273 aa14.47□□□□□ -0.09
PHGDH-231ENST00000641939 UGT3A1Q6NUS8 523 aa14.47□□□□□ -0.09
PHGDH-231ENST00000641939 FIGLAQ6QHK4 219 aa14.47□□□□□ -0.09
PHGDH-231ENST00000641939 GALNT7Q86SF2 657 aa14.47□□□□□ -0.09
PHGDH-231ENST00000641939 EXD3Q8N9H8 876 aa14.47□□□□□ -0.09
PHGDH-231ENST00000641939 CD200R1Q8TD46 325 aa14.47□□□□□ -0.09
PHGDH-231ENST00000641939 ERP44Q9BS26 406 aa14.47□□□□□ -0.09
PHGDH-231ENST00000641939 SEMA4CQ9C0C4 833 aa14.47□□□□□ -0.09
PHGDH-231ENST00000641939 CHST8Q9H2A9 424 aa14.47□□□□□ -0.09
PHGDH-231ENST00000641939 ACTL8Q9H568 366 aa14.47□□□□□ -0.09
PHGDH-231ENST00000641939 PCMTD2Q9NV79 361 aa14.47□□□□□ -0.09
PHGDH-231ENST00000641939 TRMT6Q9UJA5 497 aaKnown RBP14.47□□□□□ -0.09
PHGDH-231ENST00000641939 AP1M2Q9Y6Q5 423 aa14.47□□□□□ -0.09
PHGDH-231ENST00000641939 E7ESA3 106 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 H3BMH7 237 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 MYO1CO00159 1063 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 EIF3FO00303 357 aaPredicted RBP14.46□□□□□ -0.09
PHGDH-231ENST00000641939 RAD51CO43502 376 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 RECKO95980 971 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 FAM87AP0C7U9 286 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 ERGP11308 486 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 PTPN4P29074 926 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 SKIV2L2P42285 1042 aaKnown RBP14.46□□□□□ -0.09
PHGDH-231ENST00000641939 CCR10P46092 362 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 C19orf57Q0VDD7 668 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 PDIA2Q13087 525 aaKnown RBP14.46□□□□□ -0.09
PHGDH-231ENST00000641939 CALCOCO2Q13137 446 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 ERV3-1Q14264 604 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 FRG1Q14331 258 aaKnown RBP14.46□□□□□ -0.09
PHGDH-231ENST00000641939 ARHGAP19Q14CB8 494 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 ATP1A1-AS1Q5TC04 95 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 CYHR1Q6ZMK1 362 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 ANKMY2Q8IV38 441 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 SPNS2Q8IVW8 549 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 CPNE9Q8IYJ1 553 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 ZNF843Q8N446 348 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 FBXO15Q8NCQ5 510 aaPredicted RBP14.46□□□□□ -0.09
PHGDH-231ENST00000641939 ASB11Q8WXH4 323 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 ZUFSPQ96AP4 578 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 NDNQ99608 321 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 FAM117AQ9C073 453 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 SPRTNQ9H040 489 aaPredicted RBP14.46□□□□□ -0.09
PHGDH-231ENST00000641939 DPH5Q9H2P9 285 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 IRAK4Q9NWZ3 460 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 TAS2R13Q9NYV9 303 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 WHRNQ9P202 907 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 PLCL2Q9UPR0 1127 aa14.46□□□□□ -0.09
PHGDH-231ENST00000641939 MED13Q9UHV7 2174 aa14.46□□□□□ -0.1
PHGDH-231ENST00000641939 HELZ2Q9BYK8 2649 aaKnown RBP14.45□□□□□ -0.1
PHGDH-231ENST00000641939 A0A1W2PPV9 198 aa14.45□□□□□ -0.1
PHGDH-231ENST00000641939 ZNF839A8K0R7 811 aa14.45□□□□□ -0.1
PHGDH-231ENST00000641939 GFYI3L273 518 aa14.45□□□□□ -0.1
PHGDH-231ENST00000641939 ZSCAN9O15535 394 aaPredicted RBP14.45□□□□□ -0.1
PHGDH-231ENST00000641939 MCM3P25205 808 aa14.45□□□□□ -0.1
PHGDH-231ENST00000641939 PSMB5P28074 263 aa14.45□□□□□ -0.1
PHGDH-231ENST00000641939 HSD17B2P37059 387 aa14.45□□□□□ -0.1
PHGDH-231ENST00000641939 TIAL1Q01085 375 aaKnown RBP eCLIP14.45□□□□□ -0.1
PHGDH-231ENST00000641939 CBLBQ13191 982 aa14.45□□□□□ -0.1
PHGDH-231ENST00000641939 FASTKQ14296 549 aaKnown RBP14.45□□□□□ -0.1
PHGDH-231ENST00000641939 DEFB109BQ30KR1 87 aa14.45□□□□□ -0.1
PHGDH-231ENST00000641939 ZC3H12BQ5HYM0 836 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms