RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 VLDLRP98155 873 aa13.43□□□□□ -0.26
SCARB2-227ENST00000640957 TOP3AQ13472 1001 aaPredicted RBP13.43□□□□□ -0.26
SCARB2-227ENST00000640957 SF1Q15637 639 aaKnown RBP13.43□□□□□ -0.26
SCARB2-227ENST00000640957 HORMAD1Q86X24 394 aa13.43□□□□□ -0.26
SCARB2-227ENST00000640957 LIX1Q8N485 282 aa13.43□□□□□ -0.26
SCARB2-227ENST00000640957 RNF175Q8N4F7 328 aa13.43□□□□□ -0.26
SCARB2-227ENST00000640957 ZNF557Q8N988 423 aaPredicted RBP13.43□□□□□ -0.26
SCARB2-227ENST00000640957 STAG3L4Q8TBR4 150 aa13.43□□□□□ -0.26
SCARB2-227ENST00000640957 BRI3BPQ8WY22 251 aa13.43□□□□□ -0.26
SCARB2-227ENST00000640957 FUBP1Q96AE4 644 aaKnown RBP13.43□□□□□ -0.26
SCARB2-227ENST00000640957 HMCESQ96FZ2 354 aa13.43□□□□□ -0.26
SCARB2-227ENST00000640957 YME1L1Q96TA2 773 aa13.43□□□□□ -0.26
SCARB2-227ENST00000640957 SDHCQ99643 169 aaPredicted RBP13.43□□□□□ -0.26
SCARB2-227ENST00000640957 MMP27Q9H306 513 aa13.43□□□□□ -0.26
SCARB2-227ENST00000640957 DUSP21Q9H596 190 aa13.43□□□□□ -0.26
SCARB2-227ENST00000640957 AASDHPPTQ9NRN7 309 aa13.43□□□□□ -0.26
SCARB2-227ENST00000640957 SNTG1Q9NSN8 517 aa13.43□□□□□ -0.26
SCARB2-227ENST00000640957 MIOSQ9NXC5 875 aa13.43□□□□□ -0.26
SCARB2-227ENST00000640957 MYLKQ15746 1914 aa13.43□□□□□ -0.26
SCARB2-227ENST00000640957 SCAMP3O14828 347 aaKnown RBP13.42□□□□□ -0.26
SCARB2-227ENST00000640957 TNFRSF21O75509 655 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 ITGB1P05556 798 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 POU1F1P28069 291 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 HSPA7P48741 367 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 POU6F2P78424 691 aaPredicted RBP13.42□□□□□ -0.26
SCARB2-227ENST00000640957 MAD2L1BPQ15013 274 aaPredicted RBP13.42□□□□□ -0.26
SCARB2-227ENST00000640957 ACOX1Q15067 660 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 FAM171A1Q5VUB5 890 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 PDE12Q6L8Q7 609 aaKnown RBP13.42□□□□□ -0.26
SCARB2-227ENST00000640957 MIB1Q86YT6 1006 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 RASAL3Q86YV0 1011 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 OR4F6Q8NGB9 312 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 TMEM203Q969S6 136 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 SLC2A13Q96QE2 648 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 NARFLQ9H6Q4 476 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 SP110Q9HB58 689 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 RABL2BQ9UNT1 228 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 NINQ8N4C6 2090 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 OPN1SWP03999 348 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 PGRP06401 933 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 CCNYL3P0C7X3 344 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 CKMT1AP12532 417 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 FOXM1Q08050 763 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 PWP1Q13610 501 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 DOC2BQ14184 412 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 PLEKHG6Q3KR16 790 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 CPZQ66K79 652 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 BPHLQ86WA6 291 aaPredicted RBP13.42□□□□□ -0.26
SCARB2-227ENST00000640957 UBQLNLQ8IYU4 475 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 LRRC52Q8N7C0 313 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 LINGO1Q96FE5 620 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 EGLN2Q96KS0 407 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 SEMA3CQ99985 751 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 ABHD16BQ9H3Z7 469 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 CCDC177Q9NQR7 707 aaPredicted RBP13.42□□□□□ -0.26
SCARB2-227ENST00000640957 DNMT3LQ9UJW3 386 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 A8MX80 341 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 PTTG1O95997 202 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 DUSP28Q4G0W2 176 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 MBOAT1Q6ZNC8 495 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 SPATA19Q7Z5L4 167 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 LAX1Q8IWV1 398 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 STX19Q8N4C7 294 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 RMDN1Q96DB5 314 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 VPS35Q96QK1 796 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 UCK2Q9BZX2 261 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 DPY30Q9C005 99 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 C8orf4Q9NR00 106 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 ABI2Q9NYB9 513 aaPredicted RBP13.42□□□□□ -0.26
SCARB2-227ENST00000640957 AFF4Q9UHB7 1163 aaKnown RBP13.42□□□□□ -0.26
SCARB2-227ENST00000640957 PCTPQ9UKL6 214 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 CLCA3PQ9Y6N3 262 aa13.42□□□□□ -0.26
SCARB2-227ENST00000640957 SAGE2PA6NJ88 616 aa13.41□□□□□ -0.26
SCARB2-227ENST00000640957 NTRK1P04629 796 aa13.41□□□□□ -0.26
SCARB2-227ENST00000640957 HOXA9P31269 272 aa13.41□□□□□ -0.26
SCARB2-227ENST00000640957 TNFSF8P32971 234 aa13.41□□□□□ -0.26
SCARB2-227ENST00000640957 GALNT1Q10472 559 aaPredicted RBP13.41□□□□□ -0.26
SCARB2-227ENST00000640957 TSTQ16762 297 aaKnown RBP13.41□□□□□ -0.26
SCARB2-227ENST00000640957 DDR2Q16832 855 aa13.41□□□□□ -0.26
SCARB2-227ENST00000640957 FAM187BQ17R55 369 aa13.41□□□□□ -0.26
SCARB2-227ENST00000640957 ALFQ53S48 1182 aa13.41□□□□□ -0.26
SCARB2-227ENST00000640957 IRAK1BP1Q5VVH5 260 aa13.41□□□□□ -0.26
SCARB2-227ENST00000640957 DOK6Q6PKX4 331 aa13.41□□□□□ -0.26
SCARB2-227ENST00000640957 RAB43Q86YS6 212 aa13.41□□□□□ -0.26
SCARB2-227ENST00000640957 PJA1Q8NG27 643 aa13.41□□□□□ -0.26
SCARB2-227ENST00000640957 COQ8BQ96D53 544 aa13.41□□□□□ -0.26
SCARB2-227ENST00000640957 CCM2Q9BSQ5 444 aa13.41□□□□□ -0.26
SCARB2-227ENST00000640957 NEUROG3Q9Y4Z2 214 aa13.41□□□□□ -0.26
SCARB2-227ENST00000640957 NDUFS3O75489 264 aa13.41□□□□□ -0.26
SCARB2-227ENST00000640957 TBX18O95935 607 aa13.41□□□□□ -0.26
SCARB2-227ENST00000640957 UROSP10746 265 aa13.41□□□□□ -0.26
SCARB2-227ENST00000640957 CCNCP24863 283 aa13.41□□□□□ -0.26
SCARB2-227ENST00000640957 TAF1CQ15572 869 aaPredicted RBP13.41□□□□□ -0.26
SCARB2-227ENST00000640957 MARC1Q5VT66 337 aa13.41□□□□□ -0.26
SCARB2-227ENST00000640957 PNCKQ6P2M8 343 aa13.41□□□□□ -0.26
SCARB2-227ENST00000640957 PLEKHH3Q7Z736 793 aa13.41□□□□□ -0.26
SCARB2-227ENST00000640957 ENTHD1Q8IYW4 607 aa13.41□□□□□ -0.26
SCARB2-227ENST00000640957 OR4K2Q8NGD2 314 aa13.41□□□□□ -0.26
SCARB2-227ENST00000640957 ZNF675Q8TD23 568 aa13.41□□□□□ -0.26
SCARB2-227ENST00000640957 A0A1W2PQ09 198 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms