RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 HGFP14210 728 aa12.75□□□□□ -0.37
GTF3A-209ENST00000640289 PVRP15151 417 aa12.75□□□□□ -0.37
GTF3A-209ENST00000640289 CDH3P22223 829 aa12.75□□□□□ -0.37
GTF3A-209ENST00000640289 YBX1P67809 324 aaKnown RBP12.75□□□□□ -0.37
GTF3A-209ENST00000640289 CAMK2BQ13554 666 aa12.75□□□□□ -0.37
GTF3A-209ENST00000640289 TRA2AQ13595 282 aaKnown RBP eCLIP12.75□□□□□ -0.37
GTF3A-209ENST00000640289 KIR2DS3Q14952 304 aa12.75□□□□□ -0.37
GTF3A-209ENST00000640289 ARHGAP19Q14CB8 494 aa12.75□□□□□ -0.37
GTF3A-209ENST00000640289 FAM83EQ2M2I3 478 aa12.75□□□□□ -0.37
GTF3A-209ENST00000640289 C18orf21Q32NC0 220 aaPredicted RBP12.75□□□□□ -0.37
GTF3A-209ENST00000640289 C3orf38Q5JPI3 329 aa12.75□□□□□ -0.37
GTF3A-209ENST00000640289 FOXR1Q6PIV2 292 aa12.75□□□□□ -0.37
GTF3A-209ENST00000640289 AGTRAPQ6RW13 159 aa12.75□□□□□ -0.37
GTF3A-209ENST00000640289 FRA10AC1Q70Z53 315 aa12.75□□□□□ -0.37
GTF3A-209ENST00000640289 CLEC14AQ86T13 490 aa12.75□□□□□ -0.37
GTF3A-209ENST00000640289 SMPDL3AQ92484 453 aa12.75□□□□□ -0.37
GTF3A-209ENST00000640289 KIAA1191Q96A73 305 aa12.75□□□□□ -0.37
GTF3A-209ENST00000640289 LIN37Q96GY3 246 aaPredicted RBP12.75□□□□□ -0.37
GTF3A-209ENST00000640289 GPR78Q96P69 363 aa12.75□□□□□ -0.37
GTF3A-209ENST00000640289 ZIM3Q96PE6 472 aa12.75□□□□□ -0.37
GTF3A-209ENST00000640289 EGFL8Q99944 293 aa12.75□□□□□ -0.37
GTF3A-209ENST00000640289 ACAT2Q9BWD1 397 aa12.75□□□□□ -0.37
GTF3A-209ENST00000640289 TRIM54Q9BYV2 358 aa12.75□□□□□ -0.37
GTF3A-209ENST00000640289 STRADBQ9C0K7 418 aa12.75□□□□□ -0.37
GTF3A-209ENST00000640289 ZNF768Q9H5H4 540 aaKnown RBP12.75□□□□□ -0.37
GTF3A-209ENST00000640289 KLHL20Q9Y2M5 609 aa12.75□□□□□ -0.37
GTF3A-209ENST00000640289 LOXL2Q9Y4K0 774 aa12.75□□□□□ -0.37
GTF3A-209ENST00000640289 SLC9B1P1A6NJY1 282 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 TMX2-CTNND1H3BSU7 103 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 PRAMEF10O60809 474 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 ANKRD34CP0C6C1 535 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 CCL4P13236 92 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 ST6GAL1P15907 406 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 KRT15P19012 456 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 OAS2P29728 719 aaKnown RBP12.74□□□□□ -0.37
GTF3A-209ENST00000640289 HSD17B2P37059 387 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 AP1S2P56377 157 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 TBPL1P62380 186 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 ZNF844Q08AG5 666 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 NAE1Q13564 534 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 ACAP2Q15057 778 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 RASA2Q15283 850 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 TGFBIQ15582 683 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 SLC5A12Q1EHB4 618 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 FBXO48Q5FWF7 155 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 RAB11FIP2Q7L804 512 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 ERMP1Q7Z2K6 904 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 CCDC91Q7Z6B0 441 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 GPSM1Q86YR5 675 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 IQCKQ8N0W5 287 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 OR2A1Q8NGT9 310 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 STAG3L4Q8TBR4 150 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 HNRNPLLQ8WVV9 542 aaKnown RBP12.74□□□□□ -0.37
GTF3A-209ENST00000640289 KLHL6Q8WZ60 621 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 ALKBH8Q96BT7 664 aaKnown RBP12.74□□□□□ -0.37
GTF3A-209ENST00000640289 PYCR2Q96C36 320 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 FBXL8Q96CD0 374 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 MED8Q96G25 268 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 TRAPPC9Q96Q05 1148 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 ATOH8Q96SQ7 321 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 CD180Q99467 661 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 MIPEPQ99797 713 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 PITPNM3Q9BZ71 974 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 ROPN1BQ9BZX4 212 aaPredicted RBP12.74□□□□□ -0.37
GTF3A-209ENST00000640289 ROPN1Q9HAT0 212 aaPredicted RBP12.74□□□□□ -0.37
GTF3A-209ENST00000640289 OCIAD1Q9NX40 245 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 SEMA5BQ9P283 1151 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 TAC3Q9UHF0 121 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 RNF112Q9ULX5 631 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 SATB2Q9UPW6 733 aa12.74□□□□□ -0.37
GTF3A-209ENST00000640289 CCDC187A0A096LP49 1063 aa12.73□□□□□ -0.37
GTF3A-209ENST00000640289 A0A0J9YY10 115 aa12.73□□□□□ -0.37
GTF3A-209ENST00000640289 ZNF839A8K0R7 811 aa12.73□□□□□ -0.37
GTF3A-209ENST00000640289 EFCAB7A8K855 629 aa12.73□□□□□ -0.37
GTF3A-209ENST00000640289 UBXN8O00124 270 aa12.73□□□□□ -0.37
GTF3A-209ENST00000640289 HGSO14964 777 aaPredicted RBP12.73□□□□□ -0.37
GTF3A-209ENST00000640289 TOX3O15405 576 aaPredicted RBP12.73□□□□□ -0.37
GTF3A-209ENST00000640289 MT-ND3P03897 115 aa12.73□□□□□ -0.37
GTF3A-209ENST00000640289 ANXA5P08758 320 aa12.73□□□□□ -0.37
GTF3A-209ENST00000640289 PYGBP11216 843 aa12.73□□□□□ -0.37
GTF3A-209ENST00000640289 ITIH1P19827 911 aa12.73□□□□□ -0.37
GTF3A-209ENST00000640289 CSTF2P33240 577 aaKnown RBP eCLIP12.73□□□□□ -0.37
GTF3A-209ENST00000640289 RPA3P35244 121 aaPredicted RBP12.73□□□□□ -0.37
GTF3A-209ENST00000640289 SH3BP2P78314 561 aa12.73□□□□□ -0.37
GTF3A-209ENST00000640289 CDKL1Q00532 357 aa12.73□□□□□ -0.37
GTF3A-209ENST00000640289 KCNAB1Q14722 419 aa12.73□□□□□ -0.37
GTF3A-209ENST00000640289 SF1Q15637 639 aaKnown RBP12.73□□□□□ -0.37
GTF3A-209ENST00000640289 ZIC1Q15915 447 aa12.73□□□□□ -0.37
GTF3A-209ENST00000640289 KRT71Q3SY84 523 aa12.73□□□□□ -0.37
GTF3A-209ENST00000640289 TECRLQ5HYJ1 363 aa12.73□□□□□ -0.37
GTF3A-209ENST00000640289 KIAA1614Q5VZ46 1190 aa12.73□□□□□ -0.37
GTF3A-209ENST00000640289 KLC3Q6P597 504 aa12.73□□□□□ -0.37
GTF3A-209ENST00000640289 SH2D5Q6ZV89 423 aa12.73□□□□□ -0.37
GTF3A-209ENST00000640289 AGBL5Q8NDL9 886 aa12.73□□□□□ -0.37
GTF3A-209ENST00000640289 WDR36Q8NI36 951 aaKnown RBP12.73□□□□□ -0.37
GTF3A-209ENST00000640289 SLC22A18Q96BI1 424 aa12.73□□□□□ -0.37
GTF3A-209ENST00000640289 RHBDF1Q96CC6 855 aa12.73□□□□□ -0.37
GTF3A-209ENST00000640289 GRAMD1AQ96CP6 724 aa12.73□□□□□ -0.37
GTF3A-209ENST00000640289 SLC41A2Q96JW4 573 aa12.73□□□□□ -0.37
GTF3A-209ENST00000640289 CABS1Q96KC9 395 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms