RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 IPO13O94829 963 aaKnown RBP7.15□□□□□ -1.27
NECAP1-220ENST00000639841 SUN1O94901 812 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 GLCEO94923 617 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 TJP3O95049 919 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 MOCS3O95396 460 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 HOXB5P09067 269 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 SNHG28P0DPA3 235 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 DRD4P21917 467 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 DRD5P21918 477 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 PTBP1P26599 531 aaKnown RBP eCLIP7.15□□□□□ -1.278e-7■■■■■ 27.6
NECAP1-220ENST00000639841 ARL4AP40617 200 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 CD97P48960 835 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 CLDN2P57739 230 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 RPS6P62753 249 aaKnown RBP7.15□□□□□ -1.27
NECAP1-220ENST00000639841 GHRHRQ02643 423 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 SPAG1Q07617 926 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 LCP2Q13094 533 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 ARHGAP19Q14CB8 494 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 VEPH1Q14D04 833 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 FAM214AQ32MH5 1076 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 GCNT6Q5T4J0 391 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 CASC4Q6P4E1 433 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 LINC00114Q6XXX2 140 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 SCAIQ8N9R8 606 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 FAM184AQ8NB25 1140 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 FIG4Q92562 907 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 DVL3Q92997 716 aaPredicted RBP7.15□□□□□ -1.27
NECAP1-220ENST00000639841 AP2M1Q96CW1 435 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 NRBF2Q96F24 287 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 GPHA2Q96T91 129 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 CCT7Q99832 543 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 VCX2Q9H322 139 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 KCNK15Q9H427 330 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 LRRC4CQ9HCJ2 640 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 KCNMB3Q9NPA1 279 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 TMEM161AQ9NX61 479 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 DNAJB4Q9UDY4 337 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 TSPAN16Q9UKR8 245 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 MICAL3Q7RTP6 2002 aa7.15□□□□□ -1.27
NECAP1-220ENST00000639841 UNC80Q8N2C7 3258 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 C15orf38-AP3S2A0A0A6YYH1 394 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 KLRF2D3W0D1 207 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 C5orf67F2Z3F1 127 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 RFXAPO00287 272 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 SSX5O60225 188 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 MOSPD3O75425 235 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 ZNF254O75437 659 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 TOM1L1O75674 476 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 HSPD1P10809 573 aaKnown RBP7.14□□□□□ -1.27
NECAP1-220ENST00000639841 CLUP10909 449 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 ZNF182P17025 639 aaPredicted RBP7.14□□□□□ -1.27
NECAP1-220ENST00000639841 ITGALP20701 1170 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 CALB2P22676 271 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 RDXP35241 583 aaKnown RBP7.14□□□□□ -1.27
NECAP1-220ENST00000639841 ARSEP51690 589 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 ACTR3P61158 418 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 ARHGAP1Q07960 439 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 DNASE1L3Q13609 305 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 EDRF1Q3B7T1 1238 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 USP41Q3LFD5 358 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 RNF43Q68DV7 783 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 RTN4RL2Q86UN3 420 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 GRAMD2AQ8IUY3 354 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 AQP12AQ8IXF9 295 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 ADGRF3Q8IZF5 1079 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 PDZD8Q8NEN9 1154 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 OR52L2PQ8NGH6 319 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 OR8K3Q8NH51 312 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 LILRB4Q8NHJ6 448 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.14□□□□□ -1.27
NECAP1-220ENST00000639841 ATG4AQ8WYN0 398 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 NT5C3BQ969T7 300 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 TPD52L3Q96J77 140 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 TMEM68Q96MH6 324 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 C7orf69Q9H7B7 122 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 EPB41L5Q9HCM4 733 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 TMEM248Q9NWD8 314 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 LARSQ9P2J5 1176 aaKnown RBP7.14□□□□□ -1.27
NECAP1-220ENST00000639841 UBQLN2Q9UHD9 624 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 VPS4AQ9UN37 437 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 PKP3Q9Y446 797 aa7.14□□□□□ -1.27
NECAP1-220ENST00000639841 GOLGA8OA6NCC3 632 aa7.13□□□□□ -1.27
NECAP1-220ENST00000639841 RSPH10B2B2RC85 870 aa7.13□□□□□ -1.27
NECAP1-220ENST00000639841 GOLGA8NF8WBI6 632 aa7.13□□□□□ -1.27
NECAP1-220ENST00000639841 H0YIG0 161 aa7.13□□□□□ -1.27
NECAP1-220ENST00000639841 XPO1O14980 1071 aaKnown RBP7.13□□□□□ -1.27
NECAP1-220ENST00000639841 DHX15O43143 795 aaKnown RBP7.13□□□□□ -1.27
NECAP1-220ENST00000639841 CH25HO95992 272 aa7.13□□□□□ -1.27
NECAP1-220ENST00000639841 RSPH10BP0C881 870 aa7.13□□□□□ -1.27
NECAP1-220ENST00000639841 PSMB4P28070 264 aa7.13□□□□□ -1.27
NECAP1-220ENST00000639841 CCT6AP40227 531 aaKnown RBP7.13□□□□□ -1.27
NECAP1-220ENST00000639841 MTTPP55157 894 aa7.13□□□□□ -1.27
NECAP1-220ENST00000639841 TAS2R40P59535 323 aa7.13□□□□□ -1.27
NECAP1-220ENST00000639841 GRIK3Q13003 919 aa7.13□□□□□ -1.27
NECAP1-220ENST00000639841 LARS2Q15031 903 aaKnown RBP7.13□□□□□ -1.27
NECAP1-220ENST00000639841 RCN1Q15293 331 aa7.13□□□□□ -1.27
NECAP1-220ENST00000639841 UGCGQ16739 394 aa7.13□□□□□ -1.27
NECAP1-220ENST00000639841 ST3GAL2Q16842 350 aa7.13□□□□□ -1.27
NECAP1-220ENST00000639841 PLEKHN1Q494U1 663 aaPredicted RBP7.13□□□□□ -1.27
NECAP1-220ENST00000639841 LDLRAP1Q5SW96 308 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms