RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 IL17CQ9P0M4 197 aa10.65□□□□□ -0.7
SNIP1-204ENST00000638725 POU2F3Q9UKI9 436 aa10.65□□□□□ -0.7
SNIP1-204ENST00000638725 AP3M1Q9Y2T2 418 aa10.65□□□□□ -0.7
SNIP1-204ENST00000638725 OARD1Q9Y530 152 aa10.65□□□□□ -0.7
SNIP1-204ENST00000638725 RHOCP08134 193 aa10.65□□□□□ -0.71
SNIP1-204ENST00000638725 PTPN6P29350 595 aa10.65□□□□□ -0.71
SNIP1-204ENST00000638725 PPP5CP53041 499 aa10.65□□□□□ -0.71
SNIP1-204ENST00000638725 CDH4P55283 916 aa10.65□□□□□ -0.71
SNIP1-204ENST00000638725 CXCR4P61073 352 aa10.65□□□□□ -0.71
SNIP1-204ENST00000638725 CPSF6Q16630 551 aaKnown RBP eCLIP10.65□□□□□ -0.71
SNIP1-204ENST00000638725 SYT16Q17RD7 645 aa10.65□□□□□ -0.71
SNIP1-204ENST00000638725 DOK6Q6PKX4 331 aa10.65□□□□□ -0.71
SNIP1-204ENST00000638725 AHSA2Q719I0 299 aa10.65□□□□□ -0.71
SNIP1-204ENST00000638725 CCDC71Q8IV32 467 aaPredicted RBP10.65□□□□□ -0.71
SNIP1-204ENST00000638725 SVOPQ8N4V2 548 aa10.65□□□□□ -0.71
SNIP1-204ENST00000638725 ZHX1-C8orf76Q96EF9 292 aa10.65□□□□□ -0.71
SNIP1-204ENST00000638725 ACPTQ9BZG2 426 aa10.65□□□□□ -0.71
SNIP1-204ENST00000638725 CLPBQ9H078 707 aa10.65□□□□□ -0.71
SNIP1-204ENST00000638725 ABCG8Q9H221 673 aa10.65□□□□□ -0.71
SNIP1-204ENST00000638725 PARVBQ9HBI1 364 aa10.65□□□□□ -0.71
SNIP1-204ENST00000638725 PDP1Q9P0J1 537 aaPredicted RBP10.65□□□□□ -0.71
SNIP1-204ENST00000638725 SCN10AQ9Y5Y9 1956 aa10.65□□□□□ -0.71
SNIP1-204ENST00000638725 EFCAB9A8MZ26 197 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 WNT9AO14904 365 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 LRATO95237 230 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 SLC25A14O95258 325 aaPredicted RBP10.64□□□□□ -0.71
SNIP1-204ENST00000638725 ALPIP09923 528 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 BMP1P13497 986 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 HOXB9P17482 250 aaPredicted RBP10.64□□□□□ -0.71
SNIP1-204ENST00000638725 TACR1P25103 407 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 SERPINB1P30740 379 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 VLDLRP98155 873 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 ABHD18Q0P651 414 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 SMU1Q2TAY7 513 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 C5orf22Q49AR2 442 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 C16orf59Q7L2K0 433 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 PRSS48Q7RTY5 328 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 VTCN1Q7Z7D3 282 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 SERPINA9Q86WD7 417 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 ARMC8Q8IUR7 673 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 SLC22A15Q8IZD6 547 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 MCFD2Q8NI22 146 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 APOL4Q9BPW4 351 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 GPR63Q9BZJ6 419 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 ZBTB20Q9HC78 741 aaPredicted RBP10.64□□□□□ -0.71
SNIP1-204ENST00000638725 IL1RAPQ9NPH3 570 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 ASIC5Q9NY37 505 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 OSGIN1Q9UJX0 560 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 NDRG4Q9ULP0 352 aaKnown RBP10.64□□□□□ -0.71
SNIP1-204ENST00000638725 PPT2Q9UMR5 302 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 MAN2B2Q9Y2E5 1009 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 PCDHB9Q9Y5E1 797 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 PCDHB1Q9Y5F3 818 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 HSPE1-MOB4S4R3N1 261 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 OR2A25A4D2G3 310 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 WDR47O94967 919 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 AKR1A1P14550 325 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 RGS4P49798 205 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 ARHGDIAP52565 204 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 COLEC12Q5KU26 742 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 FAM171A1Q5VUB5 890 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 RASAL3Q86YV0 1011 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 LYSMD2Q8IV50 215 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 DENND1CQ8IV53 801 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 SLC7A5P1Q8MH63 180 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 CHCHD4Q8N4Q1 142 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 TRPV1Q8NER1 839 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 TRIB2Q92519 343 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 USP7Q93009 1102 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 DCSTAMPQ9H295 470 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 TM9SF3Q9HD45 589 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 TRPS1Q9UHF7 1281 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 SAMD4AQ9UPU9 718 aaKnown RBP10.64□□□□□ -0.71
SNIP1-204ENST00000638725 ERVW-1Q9UQF0 538 aa10.64□□□□□ -0.71
SNIP1-204ENST00000638725 TBX1O43435 398 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 WBP4O75554 376 aaKnown RBP10.63□□□□□ -0.71
SNIP1-204ENST00000638725 CCNDBP1O95273 360 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 PRAMEF1O95521 474 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 CD160O95971 181 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 PDYNP01213 254 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 EBLN1P0CF75 366 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 EPB42P16452 691 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 ZNF7P17097 686 aaPredicted RBP10.63□□□□□ -0.71
SNIP1-204ENST00000638725 FPR1P21462 350 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 LIPAP38571 399 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 GSSP48637 474 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 SEPHS1P49903 392 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 ARF5P84085 180 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 CREMQ03060 361 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 MVKQ03426 396 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 DSC1Q08554 894 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 CLLU1OSQ5K130 101 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 C9orf131Q5VYM1 1079 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 OR4F3Q6IEY1 312 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 GLB1LQ6UWU2 654 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 SAPCD2Q86UD0 394 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 HORMAD1Q86X24 394 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 ZNF513Q8N8E2 541 aaPredicted RBP10.63□□□□□ -0.71
SNIP1-204ENST00000638725 ATG16L2Q8NAA4 619 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 EGLN2Q96KS0 407 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms