RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 GADD45GO95257 159 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 PSKH1P11801 424 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 AOC1P19801 751 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 GRM5P41594 1212 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 OR8D2Q9GZM6 311 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 MED28Q9H204 178 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 MYBPHLA2RUH7 354 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 CAPN14A8MX76 684 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 CHST10O43529 356 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 XKRXQ6PP77 449 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 TAS1R3Q7RTX0 852 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 ERVK-5Q9HDB9 667 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 GDF3Q9NR23 364 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 DEFA5Q01523 94 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 TLE2Q04725 743 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 GSTCDQ8NEC7 633 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 SYT17Q9BSW7 474 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 BEX2Q9BXY8 128 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 BEX1Q9HBH7 125 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 RDH8Q9NYR8 311 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 PRMT5O14744 637 aaPredicted RBP17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 STK16O75716 305 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 IRF2P14316 349 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 CAV3P56539 151 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 PARP15Q460N3 678 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 PNLDC1Q8NA58 520 aaKnown RBP17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 HERC2P3Q9BVR0 1158 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 FN3KQ9H479 309 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 SLCO1B3Q9NPD5 702 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 MKKSQ9NPJ1 570 aaPredicted RBP17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 TRPS1Q9UHF7 1281 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 HEBP2Q9Y5Z4 205 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 SOX1O00570 391 aaPredicted RBP17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 MPPED1O15442 326 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 IFNW1P05000 195 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 SDC2P34741 201 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 VSX2P58304 361 aaPredicted RBP17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 HNRNPKP61978 463 aaKnown RBP eCLIP17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 RPS24P62847 133 aaKnown RBP17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 AUHQ13825 339 aaKnown RBP17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 LRRC20Q8TCA0 184 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 ZNF717Q9BY31 904 aaPredicted RBP17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 KCNK4Q9NYG8 393 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 LAMTOR5O43504 91 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 ATP5A1P25705 553 aaKnown RBP17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 ITGB3BPQ13352 177 aaPredicted RBP17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 GKN2Q86XP6 184 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 TBC1D21Q8IYX1 336 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 GPR20Q99678 358 aa17.48■□□□□ 0.39
CACNA1A-227ENST00000636549 SPATA31C2B4DYI2 1134 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 PGLSO95336 258 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 B3GNT6Q6ZMB0 384 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 CD40LGP29965 261 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 KHKP50053 298 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 SELENOVP59797 346 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 ECT2LQ008S8 904 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 OGDHQ02218 1023 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 NPLOC4Q8TAT6 608 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 SLC38A4Q969I6 547 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 GPR174Q9BXC1 333 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 RAP2CQ9Y3L5 183 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 PXNP49023 591 aaPredicted RBP17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 PLPPR4Q7Z2D5 763 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 TAC4Q86UU9 113 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 LAS2Q8IYD9 372 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 SLC35C1Q96A29 364 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 ALPK1Q96QP1 1244 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 UHRF1Q96T88 793 aaPredicted RBP17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 DUSP9Q99956 384 aaKnown RBP17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 CACNA1FO60840 1977 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 BCHEP06276 602 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 CDH4P55283 916 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 RBM48Q5RL73 367 aaKnown RBP17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 VTCN1Q7Z7D3 282 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 ZNF184Q99676 751 aaPredicted RBP17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 hCG_1818297A0A087WSY0 165 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 CCR8P51685 355 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 LAPTM5Q13571 262 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 SLBPQ14493 270 aaKnown RBP eCLIP17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 WASHC2DQ5SRD0 308 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 POGLUT1Q8NBL1 392 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 SPPL2BQ8TCT7 592 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 TIFAQ96CG3 184 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 CPXM1Q96SM3 734 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 EBNA1BP2Q99848 306 aaKnown RBP17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 LHX5Q9H2C1 402 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 FAM118AQ9NWS6 357 aa17.47■□□□□ 0.39
CACNA1A-227ENST00000636549 CEP170BQ9Y4F5 1589 aaPredicted RBP17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 VILLO15195 856 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 GABBR2O75899 941 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 RAET1LQ5VY80 246 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 ZNF808Q8N4W9 903 aaPredicted RBP17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 RHCGQ9UBD6 479 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 PRR5-ARHGAP8B1AHC4 643 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 UNC5CO95185 931 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 GNRHRP30968 328 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 ARHGAP8P85298 464 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 FMO1Q01740 532 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 MBLAC2Q68D91 279 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 FAM92BQ6ZTR7 304 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms