RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 AGTRAPQ6RW13 159 aa19.21■□□□□ 0.67
PDLIM2-221ENST00000622702 ZNF761Q86XN6 746 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-221ENST00000622702 FBXO39Q8N4B4 442 aa19.21■□□□□ 0.67
PDLIM2-221ENST00000622702 CCDC63Q8NA47 563 aa19.21■□□□□ 0.67
PDLIM2-221ENST00000622702 OR2L8Q8NGY9 312 aa19.21■□□□□ 0.67
PDLIM2-221ENST00000622702 TBC1D10AQ9BXI6 508 aa19.21■□□□□ 0.67
PDLIM2-221ENST00000622702 SRMSQ9H3Y6 488 aa19.21■□□□□ 0.67
PDLIM2-221ENST00000622702 XKR8Q9H6D3 395 aa19.21■□□□□ 0.67
PDLIM2-221ENST00000622702 COPG2Q9UBF2 871 aa19.21■□□□□ 0.67
PDLIM2-221ENST00000622702 RP1P56715 2156 aa19.2■□□□□ 0.66
PDLIM2-221ENST00000622702 E7ENX8 843 aa19.2■□□□□ 0.66
PDLIM2-221ENST00000622702 DLX3O60479 287 aa19.2■□□□□ 0.66
PDLIM2-221ENST00000622702 DHRS4L1P0CG22 281 aa19.2■□□□□ 0.66
PDLIM2-221ENST00000622702 MYL2P10916 166 aa19.2■□□□□ 0.66
PDLIM2-221ENST00000622702 CPA3P15088 417 aa19.2■□□□□ 0.66
PDLIM2-221ENST00000622702 E2F1Q01094 437 aa19.2■□□□□ 0.66
PDLIM2-221ENST00000622702 TAP2Q03519 686 aa19.2■□□□□ 0.66
PDLIM2-221ENST00000622702 SETDB1Q15047 1291 aa19.2■□□□□ 0.66
PDLIM2-221ENST00000622702 PFKFB4Q16877 469 aa19.2■□□□□ 0.66
PDLIM2-221ENST00000622702 LRRC56Q8IYG6 542 aaPredicted RBP19.2■□□□□ 0.66
PDLIM2-221ENST00000622702 SYTL1Q8IYJ3 562 aa19.2■□□□□ 0.66
PDLIM2-221ENST00000622702 LINC01555Q8NAE3 123 aa19.2■□□□□ 0.66
PDLIM2-221ENST00000622702 OR4E2Q8NGC2 313 aa19.2■□□□□ 0.66
PDLIM2-221ENST00000622702 UBTD2Q8WUN7 234 aa19.2■□□□□ 0.66
PDLIM2-221ENST00000622702 JPH3Q8WXH2 748 aaPredicted RBP19.2■□□□□ 0.66
PDLIM2-221ENST00000622702 CCDC74AQ96AQ1 378 aa19.2■□□□□ 0.66
PDLIM2-221ENST00000622702 CCDC126Q96EE4 140 aa19.2■□□□□ 0.66
PDLIM2-221ENST00000622702 NRTNQ99748 197 aa19.2■□□□□ 0.66
PDLIM2-221ENST00000622702 SELENOSQ9BQE4 189 aa19.2■□□□□ 0.66
PDLIM2-221ENST00000622702 EPB41L1Q9H4G0 881 aa19.2■□□□□ 0.66
PDLIM2-221ENST00000622702 A8MT66 165 aa19.19■□□□□ 0.66
PDLIM2-221ENST00000622702 STX16-NPEPL1H3BU86 382 aa19.19■□□□□ 0.66
PDLIM2-221ENST00000622702 STX16O14662 325 aa19.19■□□□□ 0.66
PDLIM2-221ENST00000622702 TAPBPO15533 448 aa19.19■□□□□ 0.66
PDLIM2-221ENST00000622702 IPO13O94829 963 aaKnown RBP19.19■□□□□ 0.66
PDLIM2-221ENST00000622702 SPINK2P20155 84 aa19.19■□□□□ 0.66
PDLIM2-221ENST00000622702 PPP2R2AP63151 447 aa19.19■□□□□ 0.66
PDLIM2-221ENST00000622702 SLC22A9Q8IVM8 553 aa19.19■□□□□ 0.66
PDLIM2-221ENST00000622702 KLHDC8AQ8IYD2 350 aa19.19■□□□□ 0.66
PDLIM2-221ENST00000622702 PTGR2Q8N8N7 351 aaPredicted RBP19.19■□□□□ 0.66
PDLIM2-221ENST00000622702 OR56A3Q8NH54 315 aa19.19■□□□□ 0.66
PDLIM2-221ENST00000622702 TMEM79Q9BSE2 394 aa19.19■□□□□ 0.66
PDLIM2-221ENST00000622702 ABCG4Q9H172 646 aa19.19■□□□□ 0.66
PDLIM2-221ENST00000622702 CNOT10Q9H9A5 744 aaKnown RBP19.19■□□□□ 0.66
PDLIM2-221ENST00000622702 NKIRAS1Q9NYS0 192 aa19.19■□□□□ 0.66
PDLIM2-221ENST00000622702 WWOXQ9NZC7 414 aa19.19■□□□□ 0.66
PDLIM2-221ENST00000622702 WASF3Q9UPY6 502 aa19.19■□□□□ 0.66
PDLIM2-221ENST00000622702 PTPRBP23467 1997 aa19.19■□□□□ 0.66
PDLIM2-221ENST00000622702 ZW10O43264 779 aa19.18■□□□□ 0.66
PDLIM2-221ENST00000622702 UBXN7O94888 489 aa19.18■□□□□ 0.66
PDLIM2-221ENST00000622702 NR1D1P20393 614 aa19.18■□□□□ 0.66
PDLIM2-221ENST00000622702 SLC6A12P48065 614 aa19.18■□□□□ 0.66
PDLIM2-221ENST00000622702 PRKAA2P54646 552 aa19.18■□□□□ 0.66
PDLIM2-221ENST00000622702 CLDN6P56747 220 aa19.18■□□□□ 0.66
PDLIM2-221ENST00000622702 GPLD1P80108 840 aa19.18■□□□□ 0.66
PDLIM2-221ENST00000622702 FOXK2Q01167 660 aa19.18■□□□□ 0.66
PDLIM2-221ENST00000622702 FASTKQ14296 549 aaKnown RBP19.18■□□□□ 0.66
PDLIM2-221ENST00000622702 PCLAFQ15004 111 aa19.18■□□□□ 0.66
PDLIM2-221ENST00000622702 METTL2BQ6P1Q9 378 aaKnown RBP19.18■□□□□ 0.66
PDLIM2-221ENST00000622702 KLHL35Q6PF15 583 aa19.18■□□□□ 0.66
PDLIM2-221ENST00000622702 SPRED1Q7Z699 444 aa19.18■□□□□ 0.66
PDLIM2-221ENST00000622702 ADGRF3Q8IZF5 1079 aa19.18■□□□□ 0.66
PDLIM2-221ENST00000622702 ANKRD42Q8N9B4 389 aa19.18■□□□□ 0.66
PDLIM2-221ENST00000622702 SMPDL3AQ92484 453 aa19.18■□□□□ 0.66
PDLIM2-221ENST00000622702 CCDC3Q9BQI4 270 aa19.18■□□□□ 0.66
PDLIM2-221ENST00000622702 SCNM1Q9BWG6 230 aa19.18■□□□□ 0.66
PDLIM2-221ENST00000622702 ATG10Q9H0Y0 220 aa19.18■□□□□ 0.66
PDLIM2-221ENST00000622702 KCNK4Q9NYG8 393 aa19.18■□□□□ 0.66
PDLIM2-221ENST00000622702 TNPO3Q9Y5L0 923 aaKnown RBP19.18■□□□□ 0.66
PDLIM2-221ENST00000622702 IGHV1OR21-1A0A087WYE8 117 aa19.17■□□□□ 0.66
PDLIM2-221ENST00000622702 BTN3A3O00478 584 aa19.17■□□□□ 0.66
PDLIM2-221ENST00000622702 B4GAT1O43505 415 aa19.17■□□□□ 0.66
PDLIM2-221ENST00000622702 CHRM5P08912 532 aaPredicted RBP19.17■□□□□ 0.66
PDLIM2-221ENST00000622702 CCND1P24385 295 aa19.17■□□□□ 0.66
PDLIM2-221ENST00000622702 SERPINB4P48594 390 aa19.17■□□□□ 0.66
PDLIM2-221ENST00000622702 WDR4P57081 412 aaKnown RBP19.17■□□□□ 0.66
PDLIM2-221ENST00000622702 OR1D5P58170 312 aa19.17■□□□□ 0.66
PDLIM2-221ENST00000622702 INSM1Q01101 510 aaPredicted RBP19.17■□□□□ 0.66
PDLIM2-221ENST00000622702 NAE1Q13564 534 aa19.17■□□□□ 0.66
PDLIM2-221ENST00000622702 PCBP2Q15366 365 aaKnown RBP eCLIP19.17■□□□□ 0.669e-7■■■■□ 24.1
PDLIM2-221ENST00000622702 PTCHD3Q3KNS1 767 aa19.17■□□□□ 0.66
PDLIM2-221ENST00000622702 OOSP2Q86WS3 158 aa19.17■□□□□ 0.66
PDLIM2-221ENST00000622702 PHF21BQ96EK2 531 aa19.17■□□□□ 0.66
PDLIM2-221ENST00000622702 SGPP1Q9BX95 441 aa19.17■□□□□ 0.66
PDLIM2-221ENST00000622702 C1QTNF3Q9BXJ4 246 aa19.17■□□□□ 0.66
PDLIM2-221ENST00000622702 CD244Q9BZW8 370 aa19.17■□□□□ 0.66
PDLIM2-221ENST00000622702 OXSMQ9NWU1 459 aa19.17■□□□□ 0.66
PDLIM2-221ENST00000622702 OGFRQ9NZT2 677 aa19.17■□□□□ 0.66
PDLIM2-221ENST00000622702 ENTPD2Q9Y5L3 495 aa19.17■□□□□ 0.66
PDLIM2-221ENST00000622702 A0A1W2PPV9 198 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 OR6C74A6NCV1 312 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 OR5K3A6NET4 321 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 BIRC5O15392 142 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 PRICKLE3O43900 615 aaPredicted RBP19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 STK16O75716 305 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 PROS1P07225 676 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 BPGMP07738 259 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 ALDH4A1P30038 563 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 CAPZBP47756 277 aa19.16■□□□□ 0.66
PDLIM2-221ENST00000622702 HSPA7P48741 367 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms