RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 A0A0G2JLL6 359 aaPredicted RBP9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 A0A0G2JMP0 313 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 PCDHGA12O60330 932 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 SH3BGRLO75368 114 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 ITGA2P17301 1181 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 DDOSTP39656 456 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 DAPP51397 102 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 ABATP80404 500 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 INCA1Q0VD86 236 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 DBPQ10586 325 aaPredicted RBP9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 CSTF3Q12996 717 aaKnown RBP9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 TOR2AQ5JU69 321 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 IRAK1BP1Q5VVH5 260 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 KIAA0930Q6ICG6 404 aaPredicted RBP9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 OR2T5Q6IEZ7 315 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 MRNIPQ6NTE8 343 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 ZNF549Q6P9A3 640 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 PRRT2Q7Z6L0 340 aaPredicted RBP9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 LAX1Q8IWV1 398 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 GALNT11Q8NCW6 608 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 OR6C4Q8NGE1 309 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 OR2T29Q8NH02 315 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 TNIP3Q96KP6 325 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 TSSK3Q96PN8 268 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 FERD3LQ96RJ6 166 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 SMAD5Q99717 465 aaKnown RBP9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 FAM83DQ9H4H8 585 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 RAD18Q9NS91 495 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 VNN3Q9NY84 501 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 TRMT6Q9UJA5 497 aaKnown RBP9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 ABCG2Q9UNQ0 655 aa9.55□□□□□ -0.88
TNFAIP3-210ENST00000620204 ZNF780AO75290 641 aaPredicted RBP9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 ECI2O75521 394 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 CKMT1AP12532 417 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 HOXD8P13378 290 aaPredicted RBP9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 CD1DP15813 335 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 ERP29P30040 261 aaKnown RBP9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 RYKP34925 604 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 RFTN2Q52LD8 501 aaPredicted RBP9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 INO80DQ53TQ3 878 aaPredicted RBP9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 ESCO2Q56NI9 601 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 FBXO47Q5MNV8 452 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 KIAA1614Q5VZ46 1190 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 CILP2Q8IUL8 1156 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 CACTIN-AS1Q8N1I8 211 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 POF1BQ8WVV4 589 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 RIT1Q92963 219 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 ASPNQ9BXN1 380 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 PRKD2Q9BZL6 878 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 MIOSQ9NXC5 875 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 MAP3K20Q9NYL2 800 aaKnown RBP9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 NLKQ9UBE8 527 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 SSC5DA1L4H1 1573 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 OR2A25A4D2G3 310 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 MOXD2PA6NHM9 499 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 ZNF250P15622 560 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 PRKCDQ05655 676 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 DGKKQ5KSL6 1271 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 KANK2Q63ZY3 851 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 PDE12Q6L8Q7 609 aaKnown RBP9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 ZNF621Q6ZSS3 439 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 ESX1Q8N693 406 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 OR13C4Q8NGS5 318 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 GPR21Q99679 349 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 CRISPLD1Q9H336 500 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 FZD8Q9H461 694 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 CCDC59Q9P031 241 aaKnown RBP9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 AFF4Q9UHB7 1163 aaKnown RBP9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 CFL2Q9Y281 166 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 GRIP1Q9Y3R0 1128 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 CLDN24A6NM45 220 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 SCAMP3O14828 347 aaKnown RBP9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 PDPK1O15530 556 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 TPPPO94811 219 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 PTHP01270 115 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 PDGFAP04085 211 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 UROSP10746 265 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 PKLRP30613 574 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 HOXC5Q00444 222 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 DSC2Q02487 901 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 MBTD1Q05BQ5 628 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 CBX2Q14781 532 aaPredicted RBP9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 PTPRNQ16849 979 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 C18orf21Q32NC0 220 aaPredicted RBP9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 YIF1BQ5BJH7 314 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 LINC00299Q6ZSB3 139 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 GPSM1Q86YR5 675 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 REPS2Q8NFH8 660 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 CHAC2Q8WUX2 184 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 AKAP1Q92667 903 aaKnown RBP eCLIP9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 BCL7BQ9BQE9 202 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 SP110Q9HB58 689 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 GLTPQ9NZD2 209 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 TMEFF2Q9UIK5 374 aaPredicted RBP9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 ARL5AQ9Y689 179 aa9.54□□□□□ -0.88
TNFAIP3-210ENST00000620204 ZNF487B1APH4 448 aa9.53□□□□□ -0.88
TNFAIP3-210ENST00000620204 CD3EAPO15446 510 aaKnown RBP9.53□□□□□ -0.88
TNFAIP3-210ENST00000620204 SCELO95171 688 aa9.53□□□□□ -0.88
TNFAIP3-210ENST00000620204 ZNF286BP0CG31 522 aa9.53□□□□□ -0.88
TNFAIP3-210ENST00000620204 HLA-DPA1P20036 260 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms